RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 DIXDC1Q155Q3 683 aa17.83■□□□□ 0.44
USP39-206ENST00000448971 HABP4Q5JVS0 413 aaKnown RBP17.83■□□□□ 0.44
USP39-206ENST00000448971 CLASRPQ8N2M8 674 aaKnown RBP17.83■□□□□ 0.44
USP39-206ENST00000448971 BRI3BPQ8WY22 251 aa17.83■□□□□ 0.44
USP39-206ENST00000448971 RAB11FIP3O75154 756 aa17.82■□□□□ 0.44
USP39-206ENST00000448971 MAP3K9P80192 1104 aa17.82■□□□□ 0.44
USP39-206ENST00000448971 SPTY2D1Q68D10 685 aaPredicted RBP17.82■□□□□ 0.44
USP39-206ENST00000448971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.82■□□□□ 0.44
USP39-206ENST00000448971 ZDHHC15Q96MV8 337 aa17.82■□□□□ 0.44
USP39-206ENST00000448971 TMEM39BQ9GZU3 492 aa17.82■□□□□ 0.44
USP39-206ENST00000448971 MAST2Q6P0Q8 1798 aa17.81■□□□□ 0.44
USP39-206ENST00000448971 TCP10L2B9ZVM9 353 aa17.81■□□□□ 0.44
USP39-206ENST00000448971 VGLL4Q14135 290 aa17.81■□□□□ 0.44
USP39-206ENST00000448971 HHIPL2Q6UWX4 724 aa17.81■□□□□ 0.44
USP39-206ENST00000448971 ERICH6Q7L0X2 663 aa17.81■□□□□ 0.44
USP39-206ENST00000448971 SNRKQ9NRH2 765 aa17.81■□□□□ 0.44
USP39-206ENST00000448971 DAGLAQ9Y4D2 1042 aa17.81■□□□□ 0.44
USP39-206ENST00000448971 IFIT2P09913 472 aaKnown RBP17.8■□□□□ 0.44
USP39-206ENST00000448971 TNNI2P48788 182 aa17.8■□□□□ 0.44
USP39-206ENST00000448971 GTF2A2P52657 109 aa17.8■□□□□ 0.44
USP39-206ENST00000448971 SLF2Q8IX21 1173 aa17.8■□□□□ 0.44
USP39-206ENST00000448971 FAM43AQ8N2R8 423 aa17.8■□□□□ 0.44
USP39-206ENST00000448971 ZNF333Q96JL9 665 aa17.8■□□□□ 0.44
USP39-206ENST00000448971 RAI14Q9P0K7 980 aa17.8■□□□□ 0.44
USP39-206ENST00000448971 CCL15-CCL14A0A0B4J2E2 113 aa17.79■□□□□ 0.44
USP39-206ENST00000448971 CACNB3P54284 484 aa17.79■□□□□ 0.44
USP39-206ENST00000448971 CCL15Q16663 113 aa17.79■□□□□ 0.44
USP39-206ENST00000448971 TBC1D9Q6ZT07 1266 aa17.79■□□□□ 0.44
USP39-206ENST00000448971 MRIQ9BWK5 157 aa17.79■□□□□ 0.44
USP39-206ENST00000448971 LRRCC1Q9C099 1032 aa17.79■□□□□ 0.44
USP39-206ENST00000448971 ZFYVE28Q9HCC9 887 aa17.79■□□□□ 0.44
USP39-206ENST00000448971 LRP2BPQ9P2M1 347 aa17.79■□□□□ 0.44
USP39-206ENST00000448971 TAF1CQ15572 869 aaPredicted RBP17.78■□□□□ 0.44
USP39-206ENST00000448971 APOBEC3HQ6NTF7 200 aaKnown RBP17.78■□□□□ 0.44
USP39-206ENST00000448971 ZNF512BQ96KM6 892 aaPredicted RBP17.78■□□□□ 0.44
USP39-206ENST00000448971 MROH7-TTC4A0A0A0MT08 1334 aa17.77■□□□□ 0.44
USP39-206ENST00000448971 ZAP70P43403 619 aa17.77■□□□□ 0.44
USP39-206ENST00000448971 MECOMQ03112 1051 aa17.77■□□□□ 0.44
USP39-206ENST00000448971 TMEM106CQ9BVX2 250 aa17.77■□□□□ 0.44
USP39-206ENST00000448971 SUPT16HQ9Y5B9 1047 aaKnown RBP17.77■□□□□ 0.44
USP39-206ENST00000448971 PCDHB15Q9Y5E8 787 aa17.77■□□□□ 0.44
USP39-206ENST00000448971 PTCH2Q9Y6C5 1203 aa17.77■□□□□ 0.44
USP39-206ENST00000448971 GAKO14976 1311 aa17.76■□□□□ 0.43
USP39-206ENST00000448971 SPDYE5A6NIY4 337 aa17.76■□□□□ 0.43
USP39-206ENST00000448971 SPDYE4A6NLX3 237 aa17.76■□□□□ 0.43
USP39-206ENST00000448971 GSTO1P78417 241 aa17.76■□□□□ 0.43
USP39-206ENST00000448971 ARHGEF6Q15052 776 aa17.76■□□□□ 0.43
USP39-206ENST00000448971 OTUD5Q96G74 571 aa17.76■□□□□ 0.43
USP39-206ENST00000448971 CSADQ9Y600 493 aa17.76■□□□□ 0.43
USP39-206ENST00000448971 SNCAIPQ9Y6H5 919 aa17.76■□□□□ 0.43
USP39-206ENST00000448971 MYH2Q9UKX2 1941 aa17.75■□□□□ 0.43
USP39-206ENST00000448971 SMARCA5O60264 1052 aaPredicted RBP17.75■□□□□ 0.43
USP39-206ENST00000448971 TLR2O60603 784 aa17.75■□□□□ 0.43
USP39-206ENST00000448971 DSG3P32926 999 aa17.75■□□□□ 0.43
USP39-206ENST00000448971 BTDP43251 543 aa17.75■□□□□ 0.43
USP39-206ENST00000448971 SLC9C1Q4G0N8 1177 aa17.75■□□□□ 0.43
USP39-206ENST00000448971 CDC42EP5Q6NZY7 148 aa17.75■□□□□ 0.43
USP39-206ENST00000448971 NBPF11Q86T75 865 aa17.75■□□□□ 0.43
USP39-206ENST00000448971 TRIOBPQ9H2D6 2365 aa17.75■□□□□ 0.43
USP39-206ENST00000448971 BTBD19C9JJ37 291 aa17.74■□□□□ 0.43
USP39-206ENST00000448971 IRF6O14896 467 aa17.74■□□□□ 0.43
USP39-206ENST00000448971 CYP2E1P05181 493 aaPredicted RBP17.74■□□□□ 0.43
USP39-206ENST00000448971 FKBP1CQ5VVH2 108 aa17.74■□□□□ 0.43
USP39-206ENST00000448971 FAM83AQ86UY5 434 aa17.74■□□□□ 0.43
USP39-206ENST00000448971 ERO1BQ86YB8 467 aa17.74■□□□□ 0.43
USP39-206ENST00000448971 ZKSCAN4Q969J2 545 aaPredicted RBP17.74■□□□□ 0.43
USP39-206ENST00000448971 NSUN4Q96CB9 384 aaKnown RBP17.74■□□□□ 0.43
USP39-206ENST00000448971 NOL10Q9BSC4 688 aaKnown RBP17.74■□□□□ 0.43
USP39-206ENST00000448971 ARHGAP39Q9C0H5 1083 aa17.74■□□□□ 0.43
USP39-206ENST00000448971 DCTPP1Q9H773 170 aa17.74■□□□□ 0.43
USP39-206ENST00000448971 ZCCHC17Q9NP64 241 aaKnown RBP17.74■□□□□ 0.43
USP39-206ENST00000448971 USP40Q9NVE5 1235 aa17.74■□□□□ 0.43
USP39-206ENST00000448971 NDUFB9Q9Y6M9 179 aa17.74■□□□□ 0.43
USP39-206ENST00000448971 RPAP1Q9BWH6 1393 aaPredicted RBP17.74■□□□□ 0.43
USP39-206ENST00000448971 IDH1O75874 414 aaKnown RBP17.73■□□□□ 0.43
USP39-206ENST00000448971 LDHCP07864 332 aa17.73■□□□□ 0.43
USP39-206ENST00000448971 CETPP11597 493 aa17.73■□□□□ 0.43
USP39-206ENST00000448971 NAA16Q6N069 864 aaPredicted RBP17.73■□□□□ 0.43
USP39-206ENST00000448971 DNAJC2Q99543 621 aaKnown RBP17.73■□□□□ 0.43
USP39-206ENST00000448971 PIH1D3Q9NQM4 214 aaKnown RBP17.73■□□□□ 0.43
USP39-206ENST00000448971 RANBP2P49792 3224 aaKnown RBP17.73■□□□□ 0.43
USP39-206ENST00000448971 SZT2Q5T011 3432 aa17.73■□□□□ 0.43
USP39-206ENST00000448971 FXR1P51114 621 aaKnown RBP eCLIP17.72■□□□□ 0.43
USP39-206ENST00000448971 LACTBP83111 547 aaPredicted RBP17.72■□□□□ 0.43
USP39-206ENST00000448971 TCP10Q12799 353 aa17.72■□□□□ 0.43
USP39-206ENST00000448971 AAMPQ13685 434 aa17.72■□□□□ 0.43
USP39-206ENST00000448971 EXOC6Q8TAG9 804 aa17.72■□□□□ 0.43
USP39-206ENST00000448971 WRNIP1Q96S55 665 aa17.72■□□□□ 0.43
USP39-206ENST00000448971 NFIAQ12857 509 aa17.71■□□□□ 0.43
USP39-206ENST00000448971 SNAPC2Q13487 334 aa17.71■□□□□ 0.43
USP39-206ENST00000448971 ZNF384Q8TF68 577 aa17.71■□□□□ 0.43
USP39-206ENST00000448971 ZBTB47Q9UFB7 747 aaPredicted RBP17.71■□□□□ 0.43
USP39-206ENST00000448971 ZSWIM8A7E2V4 1837 aa17.7■□□□□ 0.42
USP39-206ENST00000448971 DOCK2Q92608 1830 aa17.7■□□□□ 0.42
USP39-206ENST00000448971 RFX7Q2KHR2 1363 aa17.7■□□□□ 0.42
USP39-206ENST00000448971 GNRH1P01148 92 aa17.7■□□□□ 0.42
USP39-206ENST00000448971 PPIL2Q13356 520 aa17.7■□□□□ 0.42
USP39-206ENST00000448971 PICALMQ13492 652 aa17.7■□□□□ 0.42
USP39-206ENST00000448971 TTF1Q15361 905 aaPredicted RBP17.7■□□□□ 0.42
USP39-206ENST00000448971 SLC4A8Q2Y0W8 1093 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms