RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 DDTLA6NHG4 134 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-203ENST00000448428 MANSC4A6NHS7 340 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-203ENST00000448428 MAP4K4O95819 1239 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-203ENST00000448428 INHBEP58166 350 aa15.55■□□□□ 0.08
PRPF40A-203ENST00000448428 ADGRA1Q86SQ6 560 aa15.55■□□□□ 0.08
PRPF40A-203ENST00000448428 LRRCC1Q9C099 1032 aa15.55■□□□□ 0.08
PRPF40A-203ENST00000448428 DCTPP1Q9H773 170 aa15.55■□□□□ 0.08
PRPF40A-203ENST00000448428 ZNF112Q9UJU3 913 aa15.55■□□□□ 0.08
PRPF40A-203ENST00000448428 CDK5RAP2Q96SN8 1893 aa15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 SMARCA5O60264 1052 aaPredicted RBP15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 IGSF3O75054 1194 aa15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 NPM3O75607 178 aaKnown RBP15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 IDH1O75874 414 aaKnown RBP15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 TBC1D8O95759 1140 aa15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 INPP5BP32019 993 aa15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 PPP4CP60510 307 aa15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 ZSCAN29Q8IWY8 852 aaPredicted RBP15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 SH3RF3Q8TEJ3 882 aaPredicted RBP15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 CRBNQ96SW2 442 aa15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 NOL10Q9BSC4 688 aaKnown RBP15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 AATFQ9NY61 560 aaKnown RBP eCLIP15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 SNCAIPQ9Y6H5 919 aa15.54■□□□□ 0.08
PRPF40A-203ENST00000448428 BAG3O95817 575 aa15.53■□□□□ 0.08
PRPF40A-203ENST00000448428 CYP7A1P22680 504 aa15.53■□□□□ 0.08
PRPF40A-203ENST00000448428 MAP3K10Q02779 954 aa15.53■□□□□ 0.08
PRPF40A-203ENST00000448428 IFNL1Q8IU54 200 aa15.53■□□□□ 0.08
PRPF40A-203ENST00000448428 TEX11Q8IYF3 940 aa15.53■□□□□ 0.08
PRPF40A-203ENST00000448428 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.53■□□□□ 0.08
PRPF40A-203ENST00000448428 MS4A4AQ96JQ5 239 aa15.53■□□□□ 0.08
PRPF40A-203ENST00000448428 ATRNL1Q5VV63 1379 aa15.52■□□□□ 0.08
PRPF40A-203ENST00000448428 TESPA1A2RU30 521 aaPredicted RBP15.52■□□□□ 0.08
PRPF40A-203ENST00000448428 SPDYE5A6NIY4 337 aa15.52■□□□□ 0.08
PRPF40A-203ENST00000448428 PHF20L1A8MW92 1017 aa15.52■□□□□ 0.08
PRPF40A-203ENST00000448428 IGF2BP3O00425 579 aaKnown RBP eCLIP15.52■□□□□ 0.08
PRPF40A-203ENST00000448428 SLURP2P0DP57 97 aa15.52■□□□□ 0.08
PRPF40A-203ENST00000448428 ERO1BQ86YB8 467 aa15.52■□□□□ 0.08
PRPF40A-203ENST00000448428 MAGEB6Q8N7X4 407 aa15.52■□□□□ 0.08
PRPF40A-203ENST00000448428 OTUD5Q96G74 571 aa15.52■□□□□ 0.08
PRPF40A-203ENST00000448428 PTPN18Q99952 460 aa15.52■□□□□ 0.08
PRPF40A-203ENST00000448428 R3HDMLQ9H3Y0 253 aa15.52■□□□□ 0.08
PRPF40A-203ENST00000448428 PLCG2P16885 1265 aa15.51■□□□□ 0.07
PRPF40A-203ENST00000448428 ATP5JP18859 108 aa15.51■□□□□ 0.07
PRPF40A-203ENST00000448428 DYNLL1P63167 89 aaKnown RBP15.51■□□□□ 0.07
PRPF40A-203ENST00000448428 MAP3K12Q12852 859 aa15.51■□□□□ 0.07
PRPF40A-203ENST00000448428 TTF1Q15361 905 aaPredicted RBP15.51■□□□□ 0.07
PRPF40A-203ENST00000448428 TGFBRAP1Q8WUH2 860 aa15.51■□□□□ 0.07
PRPF40A-203ENST00000448428 DNAJC2Q99543 621 aaKnown RBP15.51■□□□□ 0.07
PRPF40A-203ENST00000448428 OSBPL5Q9H0X9 879 aaPredicted RBP15.51■□□□□ 0.07
PRPF40A-203ENST00000448428 FOCADQ5VW36 1801 aa15.51■□□□□ 0.07
PRPF40A-203ENST00000448428 GOLIM4O00461 696 aa15.5■□□□□ 0.07
PRPF40A-203ENST00000448428 ALDH1A1P00352 501 aa15.5■□□□□ 0.07
PRPF40A-203ENST00000448428 GTF2A2P52657 109 aa15.5■□□□□ 0.07
PRPF40A-203ENST00000448428 MIGA1Q8NAN2 632 aa15.5■□□□□ 0.07
PRPF40A-203ENST00000448428 EDC3Q96F86 508 aaKnown RBP15.5■□□□□ 0.07
PRPF40A-203ENST00000448428 CFHR5Q9BXR6 569 aa15.5■□□□□ 0.07
PRPF40A-203ENST00000448428 BOLA2Q9H3K6 86 aa15.5■□□□□ 0.07
PRPF40A-203ENST00000448428 IRF6O14896 467 aa15.49■□□□□ 0.07
PRPF40A-203ENST00000448428 TBC1D12O60347 775 aa15.49■□□□□ 0.07
PRPF40A-203ENST00000448428 PPATQ06203 517 aa15.49■□□□□ 0.07
PRPF40A-203ENST00000448428 PPIL2Q13356 520 aa15.49■□□□□ 0.07
PRPF40A-203ENST00000448428 NOL9Q5SY16 702 aaKnown RBP15.49■□□□□ 0.07
PRPF40A-203ENST00000448428 MAPKAPK5Q8IW41 473 aa15.49■□□□□ 0.07
PRPF40A-203ENST00000448428 BRI3BPQ8WY22 251 aa15.49■□□□□ 0.07
PRPF40A-203ENST00000448428 COL2A1P02458 1487 aaPredicted RBP15.48■□□□□ 0.07
PRPF40A-203ENST00000448428 CCL15-CCL14A0A0B4J2E2 113 aa15.48■□□□□ 0.07
PRPF40A-203ENST00000448428 GPR25O00155 361 aa15.48■□□□□ 0.07
PRPF40A-203ENST00000448428 CCL15Q16663 113 aa15.48■□□□□ 0.07
PRPF40A-203ENST00000448428 SLC9C2Q5TAH2 1124 aa15.48■□□□□ 0.07
PRPF40A-203ENST00000448428 OTUD7BQ6GQQ9 843 aa15.48■□□□□ 0.07
PRPF40A-203ENST00000448428 TMED8Q6PL24 325 aaPredicted RBP15.48■□□□□ 0.07
PRPF40A-203ENST00000448428 HAUS7Q99871 368 aa15.48■□□□□ 0.07
PRPF40A-203ENST00000448428 PAG1Q9NWQ8 432 aa15.48■□□□□ 0.07
PRPF40A-203ENST00000448428 FLT1P17948 1338 aa15.47■□□□□ 0.07
PRPF40A-203ENST00000448428 MYH1P12882 1939 aa15.47■□□□□ 0.07
PRPF40A-203ENST00000448428 FAM196BA6NMK8 535 aa15.47■□□□□ 0.07
PRPF40A-203ENST00000448428 CTNND1O60716 968 aaKnown RBP15.47■□□□□ 0.07
PRPF40A-203ENST00000448428 CETPP11597 493 aa15.47■□□□□ 0.07
PRPF40A-203ENST00000448428 PDE6AP16499 860 aa15.47■□□□□ 0.07
PRPF40A-203ENST00000448428 SNAPC2Q13487 334 aa15.47■□□□□ 0.07
PRPF40A-203ENST00000448428 NOM1Q5C9Z4 860 aaKnown RBP15.47■□□□□ 0.07
PRPF40A-203ENST00000448428 ZNF296Q8WUU4 475 aaPredicted RBP15.47■□□□□ 0.07
PRPF40A-203ENST00000448428 DHX36Q9H2U1 1008 aaKnown RBP15.47■□□□□ 0.07
PRPF40A-203ENST00000448428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.47■□□□□ 0.07
PRPF40A-203ENST00000448428 SIPA1L1O43166 1804 aa15.47■□□□□ 0.07
PRPF40A-203ENST00000448428 DOCK1Q14185 1865 aa15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 TCRBV5S4A2TA0A5A2 114 aa15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 CAPN15O75808 1086 aa15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 CRHR2Q13324 411 aa15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 DGKZQ13574 1117 aa15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 CERS3Q8IU89 383 aa15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 SCYL3Q8IZE3 742 aa15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 FAM43AQ8N2R8 423 aa15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 RIOK1Q9BRS2 568 aaKnown RBP15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 MCOLN1Q9GZU1 580 aa15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 ECHDC1Q9NTX5 307 aa15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 PI4KBQ9UBF8 816 aa15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 PALD1Q9ULE6 856 aa15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 MYH7P12883 1935 aa15.46■□□□□ 0.07
PRPF40A-203ENST00000448428 ZNF532Q9HCE3 1301 aa15.45■□□□□ 0.06
PRPF40A-203ENST00000448428 PHIPQ8WWQ0 1821 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 1572.1 ms