RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 CWF19L2Q2TBE0 894 aaKnown RBP9.91□□□□□ -0.82
NIPBL-202ENST00000448238 RRAGBQ5VZM2 374 aa9.91□□□□□ -0.82
NIPBL-202ENST00000448238 TUBB6Q9BUF5 446 aa9.91□□□□□ -0.82
NIPBL-202ENST00000448238 C16orf72Q14CZ0 275 aa9.91□□□□□ -0.82
NIPBL-202ENST00000448238 NXNQ6DKJ4 435 aa9.91□□□□□ -0.82
NIPBL-202ENST00000448238 SESN1Q9Y6P5 492 aa9.91□□□□□ -0.82
NIPBL-202ENST00000448238 POLA1P09884 1462 aaPredicted RBP9.91□□□□□ -0.82
NIPBL-202ENST00000448238 FAM95CA0A1B0GW59 222 aa9.91□□□□□ -0.82
NIPBL-202ENST00000448238 SERPINB10P48595 397 aa9.91□□□□□ -0.82
NIPBL-202ENST00000448238 UBXN1Q04323 297 aa9.91□□□□□ -0.82
NIPBL-202ENST00000448238 PPP2R5CQ13362 524 aa9.91□□□□□ -0.82
NIPBL-202ENST00000448238 OR9Q1Q8NGQ5 310 aa9.91□□□□□ -0.82
NIPBL-202ENST00000448238 KRT75O95678 551 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 KLHL40Q2TBA0 621 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 SMTNP53814 917 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 KAT14Q9H8E8 782 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 GSNP06396 782 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 HDAC4P56524 1084 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 CCDC152Q4G0S7 254 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 GINS4Q9BRT9 223 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 NUP58Q9BVL2 599 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 LMNB1P20700 586 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 DPH6Q7L8W6 267 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 ST13P4Q8IZP2 240 aaPredicted RBP9.9□□□□□ -0.82
NIPBL-202ENST00000448238 NACA2Q9H009 215 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 ASIC3Q9UHC3 531 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 AMOTL2Q9Y2J4 779 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 CARSP49589 748 aaKnown RBP9.9□□□□□ -0.82
NIPBL-202ENST00000448238 GSDMAQ96QA5 445 aa9.9□□□□□ -0.82
NIPBL-202ENST00000448238 TYW1Q9NV66 732 aaKnown RBP9.9□□□□□ -0.82
NIPBL-202ENST00000448238 EXOC5O00471 708 aa9.9□□□□□ -0.83
NIPBL-202ENST00000448238 RGS16O15492 202 aaPredicted RBP9.9□□□□□ -0.83
NIPBL-202ENST00000448238 SLC4A1P02730 911 aa9.9□□□□□ -0.83
NIPBL-202ENST00000448238 METTL24Q5JXM2 366 aa9.9□□□□□ -0.83
NIPBL-202ENST00000448238 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.9□□□□□ -0.83
NIPBL-202ENST00000448238 TMEM247A6NEH6 219 aa9.9□□□□□ -0.83
NIPBL-202ENST00000448238 MAN1A1P33908 653 aa9.9□□□□□ -0.83
NIPBL-202ENST00000448238 SUCLA2Q9P2R7 463 aaPredicted RBP9.9□□□□□ -0.83
NIPBL-202ENST00000448238 ZNF263O14978 683 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 TATP17735 454 aaPredicted RBP9.89□□□□□ -0.83
NIPBL-202ENST00000448238 STX1BP61266 288 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 PATL1Q86TB9 770 aaKnown RBP9.89□□□□□ -0.83
NIPBL-202ENST00000448238 SH3GL3Q99963 347 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 KRT82Q9NSB4 513 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 CAPN7Q9Y6W3 813 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 SLC4A2P04920 1241 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 EVCP57679 992 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 RAB14P61106 215 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 ZC3H12BQ5HYM0 836 aaKnown RBP9.89□□□□□ -0.83
NIPBL-202ENST00000448238 HOOK2Q96ED9 719 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 RRP36Q96EU6 259 aaKnown RBP9.89□□□□□ -0.83
NIPBL-202ENST00000448238 LRRC37BQ96QE4 947 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 ZKSCAN5Q9Y2L8 839 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 RBM42Q9BTD8 480 aaKnown RBP9.89□□□□□ -0.83
NIPBL-202ENST00000448238 TMEM191CA6NGB0 347 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 TBC1D8O95759 1140 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 LDHCP07864 332 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 TMEM191BP0C7N4 346 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 DYNC1I2Q13409 638 aaKnown RBP9.89□□□□□ -0.83
NIPBL-202ENST00000448238 VTI1AQ96AJ9 217 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 NAPGQ99747 312 aaPredicted RBP9.89□□□□□ -0.83
NIPBL-202ENST00000448238 DBNLQ9UJU6 430 aaKnown RBP9.89□□□□□ -0.83
NIPBL-202ENST00000448238 ERCC6Q03468 1493 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 SYCE1LA8MT33 242 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 MCF2P10911 925 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 CABP4P57796 275 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 CFAP221Q4G0U5 840 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 SERPINI1Q99574 410 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 TRIM15Q9C019 465 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 PARVBQ9HBI1 364 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 TTF2Q9UNY4 1162 aaKnown RBP9.89□□□□□ -0.83
NIPBL-202ENST00000448238 PSMA3P25788 255 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 SESN3P58005 492 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 GTF3C6Q969F1 213 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 SH3GL2Q99962 352 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 F8W8V4 182 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 STARD3NLO95772 234 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 PMS1P54277 932 aaKnown RBP9.89□□□□□ -0.83
NIPBL-202ENST00000448238 FGD4Q96M96 766 aa9.89□□□□□ -0.83
NIPBL-202ENST00000448238 RIOK1Q9BRS2 568 aaKnown RBP9.89□□□□□ -0.83
NIPBL-202ENST00000448238 PACSIN2Q9UNF0 486 aaPredicted RBP9.89□□□□□ -0.83
NIPBL-202ENST00000448238 PRR23D1E9PI22 279 aaPredicted RBP9.88□□□□□ -0.83
NIPBL-202ENST00000448238 CAPN9O14815 690 aa9.88□□□□□ -0.83
NIPBL-202ENST00000448238 CLTAP09496 248 aa9.88□□□□□ -0.83
NIPBL-202ENST00000448238 PRR23D2P0DMB1 279 aaPredicted RBP9.88□□□□□ -0.83
NIPBL-202ENST00000448238 EPB41P11171 864 aaKnown RBP9.88□□□□□ -0.83
NIPBL-202ENST00000448238 ASPHQ12797 758 aa9.88□□□□□ -0.83
NIPBL-202ENST00000448238 SNX1Q13596 522 aa9.88□□□□□ -0.83
NIPBL-202ENST00000448238 CDAN1Q8IWY9 1227 aa9.88□□□□□ -0.83
NIPBL-202ENST00000448238 ENOX1Q8TC92 643 aaKnown RBP9.88□□□□□ -0.83
NIPBL-202ENST00000448238 ANKIB1Q9P2G1 1089 aa9.88□□□□□ -0.83
NIPBL-202ENST00000448238 SUN1O94901 812 aa9.88□□□□□ -0.83
NIPBL-202ENST00000448238 KRT12Q99456 494 aa9.88□□□□□ -0.83
NIPBL-202ENST00000448238 ARHGAP6O43182 974 aa9.88□□□□□ -0.83
NIPBL-202ENST00000448238 ASIC1P78348 528 aa9.88□□□□□ -0.83
NIPBL-202ENST00000448238 PDCLQ13371 301 aa9.88□□□□□ -0.83
NIPBL-202ENST00000448238 BAZ1AQ9NRL2 1556 aaPredicted RBP9.88□□□□□ -0.83
NIPBL-202ENST00000448238 PSMA4P25789 261 aaKnown RBP9.88□□□□□ -0.83
NIPBL-202ENST00000448238 METAP2P50579 478 aaKnown RBP eCLIP9.88□□□□□ -0.83
NIPBL-202ENST00000448238 TSC22D3Q99576 134 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms