RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 CASC1Q6TDU7 716 aa13.95□□□□□ -0.18
LINC00408-201ENST00000447784 BEGAINQ9BUH8 593 aa13.95□□□□□ -0.18
LINC00408-201ENST00000447784 PRDM10Q9NQV6 1147 aa13.95□□□□□ -0.18
LINC00408-201ENST00000447784 USP40Q9NVE5 1235 aa13.95□□□□□ -0.18
LINC00408-201ENST00000447784 DAGLAQ9Y4D2 1042 aa13.95□□□□□ -0.18
LINC00408-201ENST00000447784 PAPPA2Q9BXP8 1791 aa13.94□□□□□ -0.18
LINC00408-201ENST00000447784 GPR75-ASB3A0A0A6YYF3 556 aa13.94□□□□□ -0.18
LINC00408-201ENST00000447784 MAGEB6P1A0A0J9YX57 407 aa13.94□□□□□ -0.18
LINC00408-201ENST00000447784 UNCXA6NJT0 531 aa13.94□□□□□ -0.18
LINC00408-201ENST00000447784 UBE2Q2LH0YL09 131 aa13.94□□□□□ -0.18
LINC00408-201ENST00000447784 PPP1R12BO60237 982 aaPredicted RBP13.94□□□□□ -0.18
LINC00408-201ENST00000447784 TNNI2P48788 182 aa13.94□□□□□ -0.18
LINC00408-201ENST00000447784 TTLL12Q14166 644 aaPredicted RBP13.94□□□□□ -0.18
LINC00408-201ENST00000447784 LDLRAD1Q5T700 205 aa13.94□□□□□ -0.18
LINC00408-201ENST00000447784 FKBP1CQ5VVH2 108 aa13.94□□□□□ -0.18
LINC00408-201ENST00000447784 APOBEC3HQ6NTF7 200 aaKnown RBP13.94□□□□□ -0.18
LINC00408-201ENST00000447784 MOB2Q70IA6 237 aa13.94□□□□□ -0.18
LINC00408-201ENST00000447784 REM2Q8IYK8 340 aaPredicted RBP13.94□□□□□ -0.18
LINC00408-201ENST00000447784 MIGA1Q8NAN2 632 aa13.94□□□□□ -0.18
LINC00408-201ENST00000447784 APPBP2Q92624 585 aa13.94□□□□□ -0.18
LINC00408-201ENST00000447784 PCNTO95613 3336 aa13.94□□□□□ -0.18
LINC00408-201ENST00000447784 GAKO14976 1311 aa13.93□□□□□ -0.18
LINC00408-201ENST00000447784 COL13A1Q5TAT6 717 aaPredicted RBP13.93□□□□□ -0.18
LINC00408-201ENST00000447784 FAM83AQ86UY5 434 aa13.93□□□□□ -0.18
LINC00408-201ENST00000447784 RASAL3Q86YV0 1011 aa13.93□□□□□ -0.18
LINC00408-201ENST00000447784 RUFY2Q8WXA3 655 aa13.93□□□□□ -0.18
LINC00408-201ENST00000447784 AATFQ9NY61 560 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC00408-201ENST00000447784 ARAP2Q8WZ64 1704 aa13.93□□□□□ -0.18
LINC00408-201ENST00000447784 HSPA8P11142 646 aaKnown RBP13.92□□□□□ -0.18
LINC00408-201ENST00000447784 PPP4CP60510 307 aa13.92□□□□□ -0.18
LINC00408-201ENST00000447784 KIF23Q02241 960 aaPredicted RBP13.92□□□□□ -0.18
LINC00408-201ENST00000447784 NBPF12Q5TAG4 269 aaPredicted RBP13.92□□□□□ -0.18
LINC00408-201ENST00000447784 ZNF384Q8TF68 577 aa13.92□□□□□ -0.18
LINC00408-201ENST00000447784 DDRGK1Q96HY6 314 aa13.92□□□□□ -0.18
LINC00408-201ENST00000447784 ZIC5Q96T25 663 aa13.92□□□□□ -0.18
LINC00408-201ENST00000447784 ANGEL1Q9UNK9 670 aaKnown RBP13.92□□□□□ -0.18
LINC00408-201ENST00000447784 RFX7Q2KHR2 1363 aa13.92□□□□□ -0.18
LINC00408-201ENST00000447784 TCRBV5S4A2TA0A5A2 114 aa13.91□□□□□ -0.18
LINC00408-201ENST00000447784 TCP10L2B9ZVM9 353 aa13.91□□□□□ -0.18
LINC00408-201ENST00000447784 MFAP1P55081 439 aaKnown RBP13.91□□□□□ -0.18
LINC00408-201ENST00000447784 ZMYM1Q5SVZ6 1142 aa13.91□□□□□ -0.18
LINC00408-201ENST00000447784 CDC42EP5Q6NZY7 148 aa13.91□□□□□ -0.18
LINC00408-201ENST00000447784 ADGRA1Q86SQ6 560 aa13.91□□□□□ -0.18
LINC00408-201ENST00000447784 TEX11Q8IYF3 940 aa13.91□□□□□ -0.18
LINC00408-201ENST00000447784 TEPSINQ96N21 525 aa13.91□□□□□ -0.18
LINC00408-201ENST00000447784 CRNKL1Q9BZJ0 848 aaKnown RBP13.91□□□□□ -0.18
LINC00408-201ENST00000447784 HELLSQ9NRZ9 838 aa13.91□□□□□ -0.18
LINC00408-201ENST00000447784 SSC5DA1L4H1 1573 aa13.91□□□□□ -0.18
LINC00408-201ENST00000447784 CDC45O75419 566 aa13.9□□□□□ -0.18
LINC00408-201ENST00000447784 MBD4O95243 580 aa13.9□□□□□ -0.18
LINC00408-201ENST00000447784 USP5P45974 858 aa13.9□□□□□ -0.18
LINC00408-201ENST00000447784 LBX1P52954 281 aa13.9□□□□□ -0.18
LINC00408-201ENST00000447784 DYNLL1P63167 89 aaKnown RBP13.9□□□□□ -0.18
LINC00408-201ENST00000447784 NMIQ13287 307 aaPredicted RBP13.9□□□□□ -0.18
LINC00408-201ENST00000447784 PRKG1Q13976 671 aa13.9□□□□□ -0.18
LINC00408-201ENST00000447784 SLFNL1Q499Z3 407 aa13.9□□□□□ -0.18
LINC00408-201ENST00000447784 MCMDC2Q4G0Z9 681 aa13.9□□□□□ -0.18
LINC00408-201ENST00000447784 CWC27Q6UX04 472 aaKnown RBP13.9□□□□□ -0.18
LINC00408-201ENST00000447784 SH3RF3Q8TEJ3 882 aaPredicted RBP13.9□□□□□ -0.18
LINC00408-201ENST00000447784 OSBP2Q969R2 916 aa13.9□□□□□ -0.18
LINC00408-201ENST00000447784 CSRNP1Q96S65 589 aa13.9□□□□□ -0.18
LINC00408-201ENST00000447784 ARMT1Q9H993 441 aa13.9□□□□□ -0.18
LINC00408-201ENST00000447784 POLR2AP24928 1970 aaKnown RBP13.9□□□□□ -0.18
LINC00408-201ENST00000447784 USP2O75604 605 aaPredicted RBP13.89□□□□□ -0.19
LINC00408-201ENST00000447784 CHGBP05060 677 aa13.89□□□□□ -0.19
LINC00408-201ENST00000447784 APPP05067 770 aa13.89□□□□□ -0.19
LINC00408-201ENST00000447784 GNAT2P19087 354 aa13.89□□□□□ -0.19
LINC00408-201ENST00000447784 CHMLP26374 656 aa13.89□□□□□ -0.19
LINC00408-201ENST00000447784 IREB2P48200 963 aaKnown RBP13.89□□□□□ -0.19
LINC00408-201ENST00000447784 HOOK2Q96ED9 719 aa13.89□□□□□ -0.19
LINC00408-201ENST00000447784 FAM227BQ96M60 508 aa13.89□□□□□ -0.19
LINC00408-201ENST00000447784 TMEM39BQ9GZU3 492 aa13.89□□□□□ -0.19
LINC00408-201ENST00000447784 PUS7LQ9H0K6 701 aaKnown RBP13.89□□□□□ -0.19
LINC00408-201ENST00000447784 SAGE1Q9NXZ1 904 aa13.89□□□□□ -0.19
LINC00408-201ENST00000447784 SLC4A4Q9Y6R1 1079 aa13.89□□□□□ -0.19
LINC00408-201ENST00000447784 RPAP1Q9BWH6 1393 aaPredicted RBP13.88□□□□□ -0.19
LINC00408-201ENST00000447784 GPAA1O43292 621 aa13.88□□□□□ -0.19
LINC00408-201ENST00000447784 CACNB3P54284 484 aa13.88□□□□□ -0.19
LINC00408-201ENST00000447784 RHBDL3P58872 404 aa13.88□□□□□ -0.19
LINC00408-201ENST00000447784 PICALMQ13492 652 aa13.88□□□□□ -0.19
LINC00408-201ENST00000447784 KIAA1211Q6ZU35 1233 aa13.88□□□□□ -0.19
LINC00408-201ENST00000447784 ANKRD13AQ8IZ07 590 aa13.88□□□□□ -0.19
LINC00408-201ENST00000447784 LCORLQ8N3X6 602 aa13.88□□□□□ -0.19
LINC00408-201ENST00000447784 FAM151AQ8WW52 585 aa13.88□□□□□ -0.19
LINC00408-201ENST00000447784 SLC10A4Q96EP9 437 aa13.88□□□□□ -0.19
LINC00408-201ENST00000447784 STRBPQ96SI9 672 aaKnown RBP13.88□□□□□ -0.19
LINC00408-201ENST00000447784 RIOK1Q9BRS2 568 aaKnown RBP13.88□□□□□ -0.19
LINC00408-201ENST00000447784 NACAP1Q9BZK3 213 aa13.88□□□□□ -0.19
LINC00408-201ENST00000447784 FZD1Q9UP38 647 aa13.88□□□□□ -0.19
LINC00408-201ENST00000447784 A0A0D9SFI3 127 aa13.87□□□□□ -0.19
LINC00408-201ENST00000447784 M0R2C6 588 aa13.87□□□□□ -0.19
LINC00408-201ENST00000447784 ENTPD3O75355 529 aa13.87□□□□□ -0.19
LINC00408-201ENST00000447784 TM4SF4P48230 202 aa13.87□□□□□ -0.19
LINC00408-201ENST00000447784 TCP10Q12799 353 aa13.87□□□□□ -0.19
LINC00408-201ENST00000447784 SPRYD7Q5W111 196 aa13.87□□□□□ -0.19
LINC00408-201ENST00000447784 ZSCAN29Q8IWY8 852 aaPredicted RBP13.87□□□□□ -0.19
LINC00408-201ENST00000447784 CDAN1Q8IWY9 1227 aa13.87□□□□□ -0.19
LINC00408-201ENST00000447784 AMOTL1Q8IY63 956 aa13.87□□□□□ -0.19
LINC00408-201ENST00000447784 TGFBRAP1Q8WUH2 860 aa13.87□□□□□ -0.19
LINC00408-201ENST00000447784 SEC62Q99442 399 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms