RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 Q9H521 79 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 MGEA5O60502 916 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 PPP1R42Q7Z4L9 355 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 EIF1ADQ8N9N8 165 aaKnown RBP3.27□□□□□ -1.89
CHD9-203ENST00000447540 DMAP1Q9NPF5 467 aaPredicted RBP3.27□□□□□ -1.89
CHD9-203ENST00000447540 MYOM2P54296 1465 aa3.27□□□□□ -1.89
CHD9-203ENST00000447540 CALB2P22676 271 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 ZBTB41Q5SVQ8 909 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 CCDC129Q6ZRS4 1044 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 CPLX4Q7Z7G2 160 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 TMTC1Q8IUR5 882 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 BPIFA3Q9BQP9 254 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 SCAF8Q9UPN6 1271 aaKnown RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 EIF2AK4Q9P2K8 1649 aaKnown RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 TOP2BQ02880 1626 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 SH3BP5O60239 455 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 NNTQ13423 1086 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 CYLC2Q14093 348 aaPredicted RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 NAIF1Q69YI7 327 aaPredicted RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 TAOK3Q9H2K8 898 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 TRPC6Q9Y210 931 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.26□□□□□ -1.89
CHD9-203ENST00000447540 ST20-MTHFSA0A0A6YYL1 179 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 ALDH1L1O75891 902 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 RARSP54136 660 aaKnown RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 TSC22D1Q15714 1073 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 LONRF3Q496Y0 759 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 PEX5LQ8IYB4 626 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 ATP11CQ8NB49 1132 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 EPSTI1Q96J88 318 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 MPP4Q96JB8 637 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 RAB21Q9UL25 225 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 ATP6V0A2Q9Y487 856 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 KIAA0232Q92628 1395 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 PHBP35232 272 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 SYCP2LQ5T4T6 812 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 ERMNQ8TAM6 284 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 DDX25Q9UHL0 483 aaKnown RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 TRIM35Q9UPQ4 493 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 KRT86O43790 486 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 SERPINC1P01008 464 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 TPP2P29144 1249 aaPredicted RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 CCDC6Q16204 474 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 RASIP1Q5U651 963 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 CWC27Q6UX04 472 aaKnown RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 PACS2Q86VP3 889 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 IFT20Q8IY31 132 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 TRMT2AQ8IZ69 625 aaKnown RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 PLCB1Q9NQ66 1216 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 FHOD1Q9Y613 1164 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 RTL1A6NKG5 1358 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 EIF4G3O43432 1585 aaKnown RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 IKBKBO14920 756 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 CAND2O75155 1236 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 MTRF1O75570 445 aaKnown RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 CASP14P31944 242 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 MAP3K12Q12852 859 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 CCDC178Q5BJE1 867 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 ANKRD13BQ86YJ7 626 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 MSANTD4Q8NCY6 345 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 MAIP1Q8WWC4 291 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 PLEKHG4BQ96PX9 1271 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 ATXN10Q9UBB4 475 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 NSD2O96028 1365 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 SYNMO15061 1565 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 EIF3HO15372 352 aaKnown RBP eCLIP3.26□□□□□ -1.892e-6■■■■■ 27
CHD9-203ENST00000447540 IDH3BO43837 385 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 GHRP10912 638 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 ACADSP16219 412 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 FLT3P36888 993 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 TMCO4Q5TGY1 634 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 NBPF14Q5TI25 921 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 NUTM2DQ5VT03 806 aaPredicted RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 NUTM2AQ8IVF1 878 aaPredicted RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 CLASRPQ8N2M8 674 aaKnown RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 HAUS1Q96CS2 278 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 TSGA10Q9BZW7 698 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 FAM204AQ9H8W3 233 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 ZBTB40Q9NUA8 1239 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 H7C1W4 665 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 DIAPH1O60610 1272 aaKnown RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 LMNB1P20700 586 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 GUCY1B3Q02153 619 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 LBRQ14739 615 aaKnown RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 HMG20BQ9P0W2 317 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 ZFATQ9P243 1243 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 KIF14Q15058 1648 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 FAM135BQ49AJ0 1406 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 MSH6P52701 1360 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 KIF4AO95239 1232 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 FAM107AO95990 144 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 ATICP31939 592 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 PPP4R3AQ6IN85 833 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 TMED8Q6PL24 325 aaPredicted RBP3.26□□□□□ -1.89
CHD9-203ENST00000447540 PAGR1Q9BTK6 254 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 LNPKQ9C0E8 428 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 PCDH18Q9HCL0 1135 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 TBCCD1Q9NVR7 557 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 UBAP1Q9NZ09 502 aa3.26□□□□□ -1.89
CHD9-203ENST00000447540 ZNF521Q96K83 1311 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms