RNA–Protein interactions for RNA: ENST00000447463.5

HDAC7-215, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-215ENST00000447463 RFX7Q2KHR2 1363 aa16.34■□□□□ 0.21
HDAC7-215ENST00000447463 CCER2I3L3R5 266 aa16.33■□□□□ 0.2
HDAC7-215ENST00000447463 MYCP01106 439 aaPredicted RBP16.33■□□□□ 0.2
HDAC7-215ENST00000447463 HOXD10P28358 340 aa16.33■□□□□ 0.2
HDAC7-215ENST00000447463 PSMC4P43686 418 aa16.33■□□□□ 0.2
HDAC7-215ENST00000447463 PARK7Q99497 189 aaKnown RBP16.33■□□□□ 0.2
HDAC7-215ENST00000447463 SRRDQ9UH36 339 aa16.33■□□□□ 0.2
HDAC7-215ENST00000447463 MROH7-TTC4A0A0A0MT08 1334 aa16.32■□□□□ 0.2
HDAC7-215ENST00000447463 IPO8O15397 1037 aaKnown RBP16.32■□□□□ 0.2
HDAC7-215ENST00000447463 ECM2O94769 699 aaPredicted RBP16.32■□□□□ 0.2
HDAC7-215ENST00000447463 FMNL1O95466 1100 aaPredicted RBP16.32■□□□□ 0.2
HDAC7-215ENST00000447463 CTGFP29279 349 aa16.32■□□□□ 0.2
HDAC7-215ENST00000447463 BTDP43251 543 aa16.32■□□□□ 0.2
HDAC7-215ENST00000447463 MAP3K10Q02779 954 aa16.32■□□□□ 0.2
HDAC7-215ENST00000447463 SH3BP5LQ7L8J4 393 aa16.32■□□□□ 0.2
HDAC7-215ENST00000447463 FASTKD5Q7L8L6 764 aaKnown RBP16.32■□□□□ 0.2
HDAC7-215ENST00000447463 SCYL3Q8IZE3 742 aa16.32■□□□□ 0.2
HDAC7-215ENST00000447463 ZHX2Q9Y6X8 837 aa16.32■□□□□ 0.2
HDAC7-215ENST00000447463 A0A0G2JLL6 359 aaPredicted RBP16.31■□□□□ 0.2
HDAC7-215ENST00000447463 DDTLA6NHG4 134 aaPredicted RBP16.31■□□□□ 0.2
HDAC7-215ENST00000447463 PTPRAP18433 802 aa16.31■□□□□ 0.2
HDAC7-215ENST00000447463 OSBPP22059 807 aa16.31■□□□□ 0.2
HDAC7-215ENST00000447463 MECOMQ03112 1051 aa16.31■□□□□ 0.2
HDAC7-215ENST00000447463 PICALMQ13492 652 aa16.31■□□□□ 0.2
HDAC7-215ENST00000447463 GPAT2Q6NUI2 795 aa16.31■□□□□ 0.2
HDAC7-215ENST00000447463 ERICH6Q7L0X2 663 aa16.31■□□□□ 0.2
HDAC7-215ENST00000447463 PRRT2Q7Z6L0 340 aaPredicted RBP16.31■□□□□ 0.2
HDAC7-215ENST00000447463 RAET1EQ8TD07 263 aa16.31■□□□□ 0.2
HDAC7-215ENST00000447463 NEUROD6Q96NK8 337 aa16.31■□□□□ 0.2
HDAC7-215ENST00000447463 DDX4Q9NQI0 724 aaKnown RBP16.31■□□□□ 0.2
HDAC7-215ENST00000447463 AFG3L2Q9Y4W6 797 aa16.31■□□□□ 0.2
HDAC7-215ENST00000447463 PTPRFP10586 1907 aa16.31■□□□□ 0.2
HDAC7-215ENST00000447463 DOCK1Q14185 1865 aa16.31■□□□□ 0.2
HDAC7-215ENST00000447463 GPR75-ASB3A0A0A6YYF3 556 aa16.3■□□□□ 0.2
HDAC7-215ENST00000447463 CTNND1O60716 968 aaKnown RBP16.3■□□□□ 0.2
HDAC7-215ENST00000447463 GNAI2P04899 355 aa16.3■□□□□ 0.2
HDAC7-215ENST00000447463 CYP2C8P10632 490 aa16.3■□□□□ 0.2
HDAC7-215ENST00000447463 TRIM27P14373 513 aa16.3■□□□□ 0.2
HDAC7-215ENST00000447463 HABP4Q5JVS0 413 aaKnown RBP16.3■□□□□ 0.2
HDAC7-215ENST00000447463 GORABQ5T7V8 394 aa16.3■□□□□ 0.2
HDAC7-215ENST00000447463 MGAMO43451 1857 aa16.29■□□□□ 0.2
HDAC7-215ENST00000447463 RANBP2P49792 3224 aaKnown RBP16.29■□□□□ 0.2
HDAC7-215ENST00000447463 PHIPQ8WWQ0 1821 aa16.29■□□□□ 0.2
HDAC7-215ENST00000447463 MYPNQ86TC9 1320 aa16.29■□□□□ 0.2
HDAC7-215ENST00000447463 BCRP11274 1271 aa16.29■□□□□ 0.2
HDAC7-215ENST00000447463 GRK4P32298 578 aa16.29■□□□□ 0.2
HDAC7-215ENST00000447463 GSTO1P78417 241 aa16.29■□□□□ 0.2
HDAC7-215ENST00000447463 ATF7IPQ6VMQ6 1270 aa16.29■□□□□ 0.2
HDAC7-215ENST00000447463 GADL1Q6ZQY3 521 aa16.29■□□□□ 0.2
HDAC7-215ENST00000447463 SPATA5Q8NB90 893 aa16.29■□□□□ 0.2
HDAC7-215ENST00000447463 ZNF384Q8TF68 577 aa16.29■□□□□ 0.2
HDAC7-215ENST00000447463 HMG20BQ9P0W2 317 aa16.29■□□□□ 0.2
HDAC7-215ENST00000447463 SLC45A1Q9Y2W3 748 aa16.29■□□□□ 0.2
HDAC7-215ENST00000447463 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-215ENST00000447463 NPM3O75607 178 aaKnown RBP16.28■□□□□ 0.2
HDAC7-215ENST00000447463 MAP4K4O95819 1239 aaPredicted RBP16.28■□□□□ 0.2
HDAC7-215ENST00000447463 FCGRTP55899 365 aa16.28■□□□□ 0.2
HDAC7-215ENST00000447463 RHBDL3P58872 404 aa16.28■□□□□ 0.2
HDAC7-215ENST00000447463 MTFR1Q15390 333 aa16.28■□□□□ 0.2
HDAC7-215ENST00000447463 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
HDAC7-215ENST00000447463 NSUN4Q96CB9 384 aaKnown RBP16.28■□□□□ 0.2
HDAC7-215ENST00000447463 SZT2Q5T011 3432 aa16.27■□□□□ 0.2
HDAC7-215ENST00000447463 PNMA6EA0A0J9YXQ4 647 aa16.27■□□□□ 0.2
HDAC7-215ENST00000447463 TRIM75PA6NK02 468 aa16.27■□□□□ 0.2
HDAC7-215ENST00000447463 TBC1D12O60347 775 aa16.27■□□□□ 0.2
HDAC7-215ENST00000447463 LDHCP07864 332 aa16.27■□□□□ 0.2
HDAC7-215ENST00000447463 SLURP2P0DP57 97 aa16.27■□□□□ 0.2
HDAC7-215ENST00000447463 ARID4AP29374 1257 aaPredicted RBP16.27■□□□□ 0.2
HDAC7-215ENST00000447463 G3BP1Q13283 466 aaKnown RBP eCLIP16.27■□□□□ 0.2
HDAC7-215ENST00000447463 PI16Q6UXB8 463 aa16.27■□□□□ 0.2
HDAC7-215ENST00000447463 BCAR3O75815 825 aa16.26■□□□□ 0.19
HDAC7-215ENST00000447463 PRKCZQ05513 592 aa16.26■□□□□ 0.19
HDAC7-215ENST00000447463 TBC1D9Q6ZT07 1266 aa16.26■□□□□ 0.19
HDAC7-215ENST00000447463 NKX2-3Q8TAU0 364 aa16.26■□□□□ 0.19
HDAC7-215ENST00000447463 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.26■□□□□ 0.19
HDAC7-215ENST00000447463 RAI14Q9P0K7 980 aa16.26■□□□□ 0.19
HDAC7-215ENST00000447463 BIN2Q9UBW5 565 aaPredicted RBP16.26■□□□□ 0.19
HDAC7-215ENST00000447463 TNNQ9UQP3 1299 aa16.26■□□□□ 0.19
HDAC7-215ENST00000447463 COL2A1P02458 1487 aaPredicted RBP16.26■□□□□ 0.19
HDAC7-215ENST00000447463 CCL5P13501 91 aa16.25■□□□□ 0.19
HDAC7-215ENST00000447463 MCAMP43121 646 aa16.25■□□□□ 0.19
HDAC7-215ENST00000447463 UBXN2AP68543 259 aa16.25■□□□□ 0.19
HDAC7-215ENST00000447463 SLAIN1Q8ND83 568 aa16.25■□□□□ 0.19
HDAC7-215ENST00000447463 SMCR8Q8TEV9 937 aaPredicted RBP16.25■□□□□ 0.19
HDAC7-215ENST00000447463 CLUAP1Q96AJ1 413 aa16.25■□□□□ 0.19
HDAC7-215ENST00000447463 SHISA4Q96DD7 197 aa16.25■□□□□ 0.19
HDAC7-215ENST00000447463 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.25■□□□□ 0.19
HDAC7-215ENST00000447463 AGTPBP1Q9UPW5 1226 aa16.25■□□□□ 0.19
HDAC7-215ENST00000447463 GJB1P08034 283 aa16.24■□□□□ 0.19
HDAC7-215ENST00000447463 UQCRFS1P1P0C7P4 283 aa16.24■□□□□ 0.19
HDAC7-215ENST00000447463 OSBPL5Q9H0X9 879 aaPredicted RBP16.24■□□□□ 0.19
HDAC7-215ENST00000447463 LRP2BPQ9P2M1 347 aa16.24■□□□□ 0.19
HDAC7-215ENST00000447463 GABRQQ9UN88 632 aa16.24■□□□□ 0.19
HDAC7-215ENST00000447463 FAM196BA6NMK8 535 aa16.23■□□□□ 0.19
HDAC7-215ENST00000447463 GJA8P48165 433 aa16.23■□□□□ 0.19
HDAC7-215ENST00000447463 CCDC84Q86UT8 332 aaPredicted RBP16.23■□□□□ 0.19
HDAC7-215ENST00000447463 TEX11Q8IYF3 940 aa16.23■□□□□ 0.19
HDAC7-215ENST00000447463 TBC1D2Q9BYX2 928 aa16.23■□□□□ 0.19
HDAC7-215ENST00000447463 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
HDAC7-215ENST00000447463 PNMA3Q9UL41 463 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms