RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 HHIPL1Q96JK4 782 aa14.45□□□□□ -0.1
RFC4-208ENST00000447345 ERC2O15083 957 aa14.44□□□□□ -0.1
RFC4-208ENST00000447345 MKRN3Q13064 507 aaKnown RBP14.44□□□□□ -0.1
RFC4-208ENST00000447345 MIGA2Q7L4E1 593 aa14.44□□□□□ -0.1
RFC4-208ENST00000447345 CHD1LQ86WJ1 897 aa14.44□□□□□ -0.1
RFC4-208ENST00000447345 RASAL3Q86YV0 1011 aa14.44□□□□□ -0.1
RFC4-208ENST00000447345 CLMNQ96JQ2 1002 aa14.44□□□□□ -0.1
RFC4-208ENST00000447345 IDI2Q9BXS1 227 aa14.44□□□□□ -0.1
RFC4-208ENST00000447345 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.44□□□□□ -0.17e-9■■□□□ 11.5
RFC4-208ENST00000447345 ENTPD3O75355 529 aa14.43□□□□□ -0.1
RFC4-208ENST00000447345 USP2O75604 605 aaPredicted RBP14.43□□□□□ -0.1
RFC4-208ENST00000447345 GLRX3O76003 335 aaKnown RBP14.43□□□□□ -0.1
RFC4-208ENST00000447345 CENPBP07199 599 aaPredicted RBP14.43□□□□□ -0.1
RFC4-208ENST00000447345 PLCG2P16885 1265 aa14.43□□□□□ -0.1
RFC4-208ENST00000447345 ADD2P35612 726 aa14.43□□□□□ -0.1
RFC4-208ENST00000447345 IREB2P48200 963 aaKnown RBP14.43□□□□□ -0.1
RFC4-208ENST00000447345 NUCB1Q02818 461 aa14.43□□□□□ -0.1
RFC4-208ENST00000447345 SLC4A8Q2Y0W8 1093 aa14.43□□□□□ -0.1
RFC4-208ENST00000447345 SH3BP5LQ7L8J4 393 aa14.43□□□□□ -0.1
RFC4-208ENST00000447345 MAPKAPK5Q8IW41 473 aa14.43□□□□□ -0.1
RFC4-208ENST00000447345 TGFBRAP1Q8WUH2 860 aa14.43□□□□□ -0.1
RFC4-208ENST00000447345 CSRNP1Q96S65 589 aa14.43□□□□□ -0.1
RFC4-208ENST00000447345 FLT1P17948 1338 aa14.42□□□□□ -0.1
RFC4-208ENST00000447345 MAGEB6P1A0A0J9YX57 407 aa14.42□□□□□ -0.1
RFC4-208ENST00000447345 TCRBV5S4A2TA0A5A2 114 aa14.42□□□□□ -0.1
RFC4-208ENST00000447345 DDTLA6NHG4 134 aaPredicted RBP14.42□□□□□ -0.1
RFC4-208ENST00000447345 FAM155AB1AL88 458 aaPredicted RBP14.42□□□□□ -0.1
RFC4-208ENST00000447345 IGSF3O75054 1194 aa14.42□□□□□ -0.1
RFC4-208ENST00000447345 SLC10A3P09131 477 aa14.42□□□□□ -0.1
RFC4-208ENST00000447345 SLURP2P0DP57 97 aa14.42□□□□□ -0.1
RFC4-208ENST00000447345 PDE1AP54750 535 aa14.42□□□□□ -0.1
RFC4-208ENST00000447345 PPP4CP60510 307 aa14.42□□□□□ -0.1
RFC4-208ENST00000447345 DCAF15Q66K64 600 aa14.42□□□□□ -0.1
RFC4-208ENST00000447345 JMYQ8N9B5 988 aa14.42□□□□□ -0.1
RFC4-208ENST00000447345 ZIC5Q96T25 663 aa14.42□□□□□ -0.1
RFC4-208ENST00000447345 OSBPL5Q9H0X9 879 aaPredicted RBP14.42□□□□□ -0.1
RFC4-208ENST00000447345 FAM196BA6NMK8 535 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 NEFLP07196 543 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 USP5P45974 858 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 MAP3K11Q16584 847 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 LDLRAD1Q5T700 205 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 LCORLQ8N3X6 602 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 KBTBD3Q8NAB2 608 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 CCDC102AQ96A19 550 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 HOOK2Q96ED9 719 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 WRNIP1Q96S55 665 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 FSD1Q9BTV5 496 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 ARMT1Q9H993 441 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 ELP3Q9H9T3 547 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 SAP30BPQ9UHR5 308 aaKnown RBP14.41□□□□□ -0.1
RFC4-208ENST00000447345 COL2A1P02458 1487 aaPredicted RBP14.41□□□□□ -0.1
RFC4-208ENST00000447345 PHIPQ8WWQ0 1821 aa14.41□□□□□ -0.1
RFC4-208ENST00000447345 ATRNL1Q5VV63 1379 aa14.4□□□□□ -0.1
RFC4-208ENST00000447345 MBD4O95243 580 aa14.4□□□□□ -0.1
RFC4-208ENST00000447345 NOGQ13253 232 aa14.4□□□□□ -0.1
RFC4-208ENST00000447345 VGLL4Q14135 290 aa14.4□□□□□ -0.1
RFC4-208ENST00000447345 ZSCAN25Q6NSZ9 544 aa14.4□□□□□ -0.1
RFC4-208ENST00000447345 ANKRD13AQ8IZ07 590 aa14.4□□□□□ -0.1
RFC4-208ENST00000447345 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.4□□□□□ -0.1
RFC4-208ENST00000447345 RIOK1Q9BRS2 568 aaKnown RBP14.4□□□□□ -0.1
RFC4-208ENST00000447345 ZNF341Q9BYN7 854 aa14.4□□□□□ -0.1
RFC4-208ENST00000447345 PTPRFP10586 1907 aa14.4□□□□□ -0.1
RFC4-208ENST00000447345 HSPA1AP0DMV8 641 aaKnown RBP14.39□□□□□ -0.11
RFC4-208ENST00000447345 HSPA1BP0DMV9 641 aaKnown RBP14.39□□□□□ -0.11
RFC4-208ENST00000447345 INPP5BP32019 993 aa14.39□□□□□ -0.11
RFC4-208ENST00000447345 KIF23Q02241 960 aaPredicted RBP14.39□□□□□ -0.11
RFC4-208ENST00000447345 TMED8Q6PL24 325 aaPredicted RBP14.39□□□□□ -0.11
RFC4-208ENST00000447345 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.39□□□□□ -0.11
RFC4-208ENST00000447345 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
RFC4-208ENST00000447345 ZKSCAN4Q969J2 545 aaPredicted RBP14.39□□□□□ -0.11
RFC4-208ENST00000447345 SLC10A4Q96EP9 437 aa14.39□□□□□ -0.11
RFC4-208ENST00000447345 STAP2Q9UGK3 403 aa14.39□□□□□ -0.11
RFC4-208ENST00000447345 CSADQ9Y600 493 aa14.39□□□□□ -0.11
RFC4-208ENST00000447345 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
RFC4-208ENST00000447345 MAP3K9P80192 1104 aa14.38□□□□□ -0.11
RFC4-208ENST00000447345 UBE3CQ15386 1083 aa14.38□□□□□ -0.11
RFC4-208ENST00000447345 CERS3Q8IU89 383 aa14.38□□□□□ -0.11
RFC4-208ENST00000447345 PLEKHM2Q8IWE5 1019 aa14.38□□□□□ -0.11
RFC4-208ENST00000447345 SDR42E1Q8WUS8 393 aa14.38□□□□□ -0.11
RFC4-208ENST00000447345 WNK4Q96J92 1243 aa14.38□□□□□ -0.11
RFC4-208ENST00000447345 CRNKL1Q9BZJ0 848 aaKnown RBP14.38□□□□□ -0.11
RFC4-208ENST00000447345 PALD1Q9ULE6 856 aa14.38□□□□□ -0.11
RFC4-208ENST00000447345 TRIM6-TRIM34B2RNG4 842 aa14.37□□□□□ -0.11
RFC4-208ENST00000447345 PRKAB2O43741 272 aa14.37□□□□□ -0.11
RFC4-208ENST00000447345 PDE4AP27815 886 aa14.37□□□□□ -0.11
RFC4-208ENST00000447345 MAP2K2P36507 400 aa14.37□□□□□ -0.11
RFC4-208ENST00000447345 AIDAQ96BJ3 306 aa14.37□□□□□ -0.11
RFC4-208ENST00000447345 OPTNQ96CV9 577 aa14.37□□□□□ -0.11
RFC4-208ENST00000447345 OTUD5Q96G74 571 aa14.37□□□□□ -0.11
RFC4-208ENST00000447345 PUS7LQ9H0K6 701 aaKnown RBP14.37□□□□□ -0.11
RFC4-208ENST00000447345 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.37□□□□□ -0.11
RFC4-208ENST00000447345 SNCAIPQ9Y6H5 919 aa14.37□□□□□ -0.11
RFC4-208ENST00000447345 M0R2C6 588 aa14.36□□□□□ -0.11
RFC4-208ENST00000447345 RNF113AO15541 343 aaKnown RBP14.36□□□□□ -0.11
RFC4-208ENST00000447345 GJA5P36382 358 aa14.36□□□□□ -0.11
RFC4-208ENST00000447345 MAP2K1Q02750 393 aaPredicted RBP14.36□□□□□ -0.11
RFC4-208ENST00000447345 SPRYD7Q5W111 196 aa14.36□□□□□ -0.11
RFC4-208ENST00000447345 CRACR2BQ8N4Y2 399 aaPredicted RBP14.36□□□□□ -0.11
RFC4-208ENST00000447345 APPBP2Q92624 585 aa14.36□□□□□ -0.11
RFC4-208ENST00000447345 RILPL2Q969X0 211 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms