RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SELPP16109 830 aa6.75□□□□□ -1.33
HMGB1P16-201ENST00000447155 MCM4P33991 863 aa6.75□□□□□ -1.33
HMGB1P16-201ENST00000447155 GTF2F1P35269 517 aaKnown RBP eCLIP6.75□□□□□ -1.33
HMGB1P16-201ENST00000447155 WIPI1Q5MNZ9 446 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P16-201ENST00000447155 DHX38Q92620 1227 aaKnown RBP6.75□□□□□ -1.33
HMGB1P16-201ENST00000447155 PLPPR2Q96GM1 343 aa6.75□□□□□ -1.33
HMGB1P16-201ENST00000447155 WDR18Q9BV38 432 aa6.75□□□□□ -1.33
HMGB1P16-201ENST00000447155 TMPRSS13Q9BYE2 586 aa6.75□□□□□ -1.33
HMGB1P16-201ENST00000447155 BRMS1Q9HCU9 246 aa6.75□□□□□ -1.33
HMGB1P16-201ENST00000447155 ADAMTS8Q9UP79 889 aa6.75□□□□□ -1.33
HMGB1P16-201ENST00000447155 TACC3Q9Y6A5 838 aa6.75□□□□□ -1.33
HMGB1P16-201ENST00000447155 FAM229AH3BQW9 127 aa6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 GFRA2O00451 464 aa6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 CDK8P49336 464 aa6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 INSM1Q01101 510 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 INPP5AQ14642 412 aa6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 ZC3H12AQ5D1E8 599 aaKnown RBP6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 LRFN4Q6PJG9 635 aa6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 KIAA1211Q6ZU35 1233 aa6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 ACAD11Q709F0 780 aa6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 ELMO3Q96BJ8 720 aa6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 SRRTQ9BXP5 876 aaKnown RBP6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 RNF208Q9H0X6 261 aa6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 EHMT1Q9H9B1 1298 aa6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 RAD18Q9NS91 495 aa6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 POLR3KQ9Y2Y1 108 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 PCDHGC5Q9Y5F6 944 aa6.74□□□□□ -1.33
HMGB1P16-201ENST00000447155 STK10O94804 968 aaKnown RBP6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 ATE1O95260 518 aa6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 SPATA31C1P0DKV0 1188 aa6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 IMPDH2P12268 514 aa6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 ID3Q02535 119 aa6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 CYFIP1Q7L576 1253 aa6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 CPLX3Q8WVH0 158 aa6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 SCARF2Q96GP6 870 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 FERD3LQ96RJ6 166 aa6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 HIRIP3Q9BW71 556 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 SUGCTQ9HAC7 445 aa6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 CYP4F12Q9HCS2 524 aa6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 CNTNAP5Q8WYK1 1306 aa6.73□□□□□ -1.33
HMGB1P16-201ENST00000447155 DCDC2CA8MYV0 355 aa6.72□□□□□ -1.33
HMGB1P16-201ENST00000447155 ERVK-24P63145 666 aa6.72□□□□□ -1.33
HMGB1P16-201ENST00000447155 CLCQ05315 142 aa6.72□□□□□ -1.33
HMGB1P16-201ENST00000447155 RBL2Q08999 1139 aa6.72□□□□□ -1.33
HMGB1P16-201ENST00000447155 AKAP4Q5JQC9 854 aa6.72□□□□□ -1.33
HMGB1P16-201ENST00000447155 NUTM2GQ5VZR2 741 aa6.72□□□□□ -1.33
HMGB1P16-201ENST00000447155 GK5Q6ZS86 529 aa6.72□□□□□ -1.33
HMGB1P16-201ENST00000447155 TMEM130Q8N3G9 435 aa6.72□□□□□ -1.33
HMGB1P16-201ENST00000447155 SMG8Q8ND04 991 aaKnown RBP6.72□□□□□ -1.33
HMGB1P16-201ENST00000447155 ZNRF3Q9ULT6 936 aa6.72□□□□□ -1.33
HMGB1P16-201ENST00000447155 PPT2Q9UMR5 302 aa6.72□□□□□ -1.33
HMGB1P16-201ENST00000447155 PRR36Q9H6K5 1346 aa6.72□□□□□ -1.33
HMGB1P16-201ENST00000447155 TMPRSS2O15393 492 aa6.71□□□□□ -1.34
HMGB1P16-201ENST00000447155 EIF6P56537 245 aaKnown RBP6.71□□□□□ -1.34
HMGB1P16-201ENST00000447155 PDE4BQ07343 736 aa6.71□□□□□ -1.34
HMGB1P16-201ENST00000447155 SOGA3Q5TF21 947 aa6.71□□□□□ -1.34
HMGB1P16-201ENST00000447155 CCDC81Q6ZN84 652 aa6.71□□□□□ -1.34
HMGB1P16-201ENST00000447155 CRBNQ96SW2 442 aa6.71□□□□□ -1.34
HMGB1P16-201ENST00000447155 DNAJC2Q99543 621 aaKnown RBP6.71□□□□□ -1.34
HMGB1P16-201ENST00000447155 ZNF408Q9H9D4 720 aa6.71□□□□□ -1.34
HMGB1P16-201ENST00000447155 CRIM1Q9NZV1 1036 aa6.71□□□□□ -1.34
HMGB1P16-201ENST00000447155 PPP1R9AQ9ULJ8 1098 aa6.71□□□□□ -1.34
HMGB1P16-201ENST00000447155 PCDHB14Q9Y5E9 798 aa6.71□□□□□ -1.34
HMGB1P16-201ENST00000447155 F8W735 103 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 GRIN3BO60391 1043 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 HTR3BO95264 441 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 ADH5P11766 374 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 RING1Q06587 406 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 GRIK4Q16099 956 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 FBXW10Q5XX13 1052 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 ANKRD34AQ69YU3 496 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 SHISA2Q6UWI4 295 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 C12orf40Q86WS4 652 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 CKAP2LQ8IYA6 745 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 OR6P1Q8NGX9 317 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 LENG1Q96BZ8 264 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 SHDQ96IW2 340 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 NACC1Q96RE7 527 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 ATXN3LQ9H3M9 355 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 HIF3AQ9Y2N7 669 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 CSADQ9Y600 493 aa6.7□□□□□ -1.34
HMGB1P16-201ENST00000447155 C9orf172C9J069 976 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 FANCGO15287 622 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 TIAF1O95411 115 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 ETFBP38117 255 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 GIPRP48546 466 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 NRG1Q02297 640 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 SOX4Q06945 474 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 MLECQ14165 292 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 LRRFIP1Q32MZ4 808 aaKnown RBP6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 PPM1JQ5JR12 505 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 FDX2Q6P4F2 183 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 ALYREFQ86V81 257 aaKnown RBP6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 RBBP8NLQ8NC74 664 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 ANAPC16Q96DE5 110 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 WNT10AQ9GZT5 417 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 AKTIPQ9H8T0 292 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 PICK1Q9NRD5 415 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 REV1Q9UBZ9 1251 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 832.1 ms