RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 UBL7Q96S82 380 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-206ENST00000447024 ZMIZ1Q9ULJ6 1067 aa11.01□□□□□ -0.65
SMARCE1-206ENST00000447024 SBNO1A3KN83 1393 aa11.01□□□□□ -0.65
SMARCE1-206ENST00000447024 GPRASP1Q5JY77 1395 aa11.01□□□□□ -0.65
SMARCE1-206ENST00000447024 TONSLQ96HA7 1378 aa11.01□□□□□ -0.65
SMARCE1-206ENST00000447024 COL22A1Q8NFW1 1626 aaPredicted RBP11□□□□□ -0.65
SMARCE1-206ENST00000447024 TMEM132AQ24JP5 1023 aa11□□□□□ -0.65
SMARCE1-206ENST00000447024 DDX17Q92841 729 aaKnown RBP11□□□□□ -0.65
SMARCE1-206ENST00000447024 RGS17Q9UGC6 210 aaPredicted RBP11□□□□□ -0.65
SMARCE1-206ENST00000447024 TIMELESSQ9UNS1 1208 aa11□□□□□ -0.65
SMARCE1-206ENST00000447024 SPATA31A3Q5VYP0 1347 aa11□□□□□ -0.65
SMARCE1-206ENST00000447024 CENPJQ9HC77 1338 aaPredicted RBP11□□□□□ -0.65
SMARCE1-206ENST00000447024 LRP6O75581 1613 aa10.99□□□□□ -0.65
SMARCE1-206ENST00000447024 TNFRSF10BO14763 440 aa10.99□□□□□ -0.65
SMARCE1-206ENST00000447024 IGLV1-40P01703 118 aa10.99□□□□□ -0.65
SMARCE1-206ENST00000447024 TXNDC11Q6PKC3 985 aa10.99□□□□□ -0.65
SMARCE1-206ENST00000447024 KRT28Q7Z3Y7 464 aa10.99□□□□□ -0.65
SMARCE1-206ENST00000447024 LACRTQ9GZZ8 138 aa10.99□□□□□ -0.65
SMARCE1-206ENST00000447024 ARHGEF10O15013 1369 aa10.99□□□□□ -0.65
SMARCE1-206ENST00000447024 ROCK2O75116 1388 aaKnown RBP10.99□□□□□ -0.65
SMARCE1-206ENST00000447024 TRPM1Q7Z4N2 1603 aa10.98□□□□□ -0.65
SMARCE1-206ENST00000447024 GSC2O15499 205 aa10.98□□□□□ -0.65
SMARCE1-206ENST00000447024 HYAL2Q12891 473 aa10.98□□□□□ -0.65
SMARCE1-206ENST00000447024 CEP135Q66GS9 1140 aa10.98□□□□□ -0.65
SMARCE1-206ENST00000447024 ACAD11Q709F0 780 aa10.98□□□□□ -0.65
SMARCE1-206ENST00000447024 PIK3R5Q8WYR1 880 aa10.98□□□□□ -0.65
SMARCE1-206ENST00000447024 COL26A1Q96A83 441 aa10.98□□□□□ -0.65
SMARCE1-206ENST00000447024 HIRIP3Q9BW71 556 aaPredicted RBP10.98□□□□□ -0.65
SMARCE1-206ENST00000447024 FAM13BQ9NYF5 915 aa10.98□□□□□ -0.65
SMARCE1-206ENST00000447024 RGPD8O14715 1765 aaPredicted RBP10.98□□□□□ -0.65
SMARCE1-206ENST00000447024 CD68P34810 354 aaPredicted RBP10.97□□□□□ -0.65
SMARCE1-206ENST00000447024 ARMC10Q8N2F6 343 aa10.97□□□□□ -0.65
SMARCE1-206ENST00000447024 NUDT16Q96DE0 195 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-206ENST00000447024 SPACA7Q96KW9 195 aa10.97□□□□□ -0.65
SMARCE1-206ENST00000447024 MKNK1Q9BUB5 465 aa10.97□□□□□ -0.65
SMARCE1-206ENST00000447024 KCNK4Q9NYG8 393 aa10.97□□□□□ -0.65
SMARCE1-206ENST00000447024 STOML1Q9UBI4 398 aa10.97□□□□□ -0.65
SMARCE1-206ENST00000447024 BRD4O60885 1362 aaPredicted RBP10.97□□□□□ -0.65
SMARCE1-206ENST00000447024 USP32Q8NFA0 1604 aa10.97□□□□□ -0.65
SMARCE1-206ENST00000447024 ITSN1Q15811 1721 aa10.97□□□□□ -0.65
SMARCE1-206ENST00000447024 ATP7BP35670 1465 aa10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 TNS3Q68CZ2 1445 aa10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 SBNO2Q9Y2G9 1366 aa10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 PRR36Q9H6K5 1346 aa10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 TM4SF5O14894 197 aa10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 SMNDC1O75940 238 aaKnown RBP eCLIP10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 MED26O95402 600 aa10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 TGFB1P01137 390 aa10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 ELOAQ14241 798 aaKnown RBP10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 ADAMTSL4Q6UY14 1074 aa10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 CAPN12Q6ZSI9 719 aa10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 STK32AQ8WU08 396 aa10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 CDK19Q9BWU1 502 aa10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 GOLGA2P5Q9HBQ8 144 aa10.96□□□□□ -0.65
SMARCE1-206ENST00000447024 RALGAPBQ86X10 1494 aa10.95□□□□□ -0.66
SMARCE1-206ENST00000447024 EVC2Q86UK5 1308 aa10.95□□□□□ -0.66
SMARCE1-206ENST00000447024 KIAA1324LA8MWY0 1029 aaPredicted RBP10.95□□□□□ -0.66
SMARCE1-206ENST00000447024 DHX15O43143 795 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-206ENST00000447024 CDC27P30260 824 aa10.95□□□□□ -0.66
SMARCE1-206ENST00000447024 ZAP70P43403 619 aa10.95□□□□□ -0.66
SMARCE1-206ENST00000447024 NGDNQ8NEJ9 315 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-206ENST00000447024 CEP41Q9BYV8 373 aa10.95□□□□□ -0.66
SMARCE1-206ENST00000447024 RASSF4Q9H2L5 321 aa10.95□□□□□ -0.66
SMARCE1-206ENST00000447024 CXXC1Q9P0U4 656 aaPredicted RBP10.95□□□□□ -0.66
SMARCE1-206ENST00000447024 CDK12Q9NYV4 1490 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-206ENST00000447024 POLR3AO14802 1390 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-206ENST00000447024 AFF2P51816 1311 aa10.94□□□□□ -0.66
SMARCE1-206ENST00000447024 KIF4AO95239 1232 aa10.94□□□□□ -0.66
SMARCE1-206ENST00000447024 CDC25BP30305 580 aa10.94□□□□□ -0.66
SMARCE1-206ENST00000447024 NBPF8Q3BBV2 869 aa10.94□□□□□ -0.66
SMARCE1-206ENST00000447024 PMFBP1Q8TBY8 1022 aa10.94□□□□□ -0.66
SMARCE1-206ENST00000447024 CARD10Q9BWT7 1032 aa10.94□□□□□ -0.66
SMARCE1-206ENST00000447024 COBLO75128 1261 aa10.93□□□□□ -0.66
SMARCE1-206ENST00000447024 SCNN1AP37088 669 aa10.93□□□□□ -0.66
SMARCE1-206ENST00000447024 XPCQ01831 940 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-206ENST00000447024 NAA30Q147X3 362 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-206ENST00000447024 TTC39BQ5VTQ0 682 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-206ENST00000447024 GPR152Q8TDT2 470 aa10.93□□□□□ -0.66
SMARCE1-206ENST00000447024 PUS7Q96PZ0 661 aaKnown RBP10.93□□□□□ -0.66
SMARCE1-206ENST00000447024 CARD11Q9BXL7 1154 aa10.93□□□□□ -0.66
SMARCE1-206ENST00000447024 FNDC3AQ9Y2H6 1198 aaKnown RBP10.93□□□□□ -0.66
SMARCE1-206ENST00000447024 QRICH2Q9H0J4 1663 aa10.92□□□□□ -0.66
SMARCE1-206ENST00000447024 RXRBP28702 533 aa10.92□□□□□ -0.66
SMARCE1-206ENST00000447024 SRPK2P78362 688 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-206ENST00000447024 UVSSAQ2YD98 709 aa10.92□□□□□ -0.66
SMARCE1-206ENST00000447024 ZDHHC13Q8IUH4 622 aa10.92□□□□□ -0.66
SMARCE1-206ENST00000447024 UTP4Q969X6 686 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-206ENST00000447024 C8orf37Q96NL8 207 aa10.92□□□□□ -0.66
SMARCE1-206ENST00000447024 TOPAZ1Q8N9V7 1692 aa10.92□□□□□ -0.66
SMARCE1-206ENST00000447024 FSCN2O14926 492 aa10.91□□□□□ -0.66
SMARCE1-206ENST00000447024 CYP2E1P05181 493 aaPredicted RBP10.91□□□□□ -0.66
SMARCE1-206ENST00000447024 EPHA1P21709 976 aa10.91□□□□□ -0.66
SMARCE1-206ENST00000447024 RBM6P78332 1123 aaKnown RBP10.91□□□□□ -0.66
SMARCE1-206ENST00000447024 KIAA1211Q6ZU35 1233 aa10.91□□□□□ -0.66
SMARCE1-206ENST00000447024 FAM46AQ96IP4 442 aaKnown RBP10.91□□□□□ -0.66
SMARCE1-206ENST00000447024 ABI2Q9NYB9 513 aaPredicted RBP10.91□□□□□ -0.66
SMARCE1-206ENST00000447024 TRPC5Q9UL62 973 aaPredicted RBP10.91□□□□□ -0.66
SMARCE1-206ENST00000447024 TRPM3Q9HCF6 1732 aaPredicted RBP10.91□□□□□ -0.66
SMARCE1-206ENST00000447024 MARF1Q9Y4F3 1742 aaKnown RBP10.91□□□□□ -0.66
SMARCE1-206ENST00000447024 ACEP12821 1306 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms