RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 NOC4LQ9BVI4 516 aaKnown RBP9.03□□□□□ -0.96
RIF1-205ENST00000444746 PTPRTO14522 1441 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 ADKP55263 362 aaKnown RBP9.03□□□□□ -0.96
RIF1-205ENST00000444746 PLCB3Q01970 1234 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 FAM160A1Q05DH4 1040 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 GSTA5Q7RTV2 222 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 VPS18Q9P253 973 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 CYP2D7A0A087X1C5 515 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 CETN2P41208 172 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 SYNE4Q8N205 404 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 KBTBD3Q8NAB2 608 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 RASGRP4Q8TDF6 673 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 KIFC2Q96AC6 838 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 INCENPQ9NQS7 918 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 CLIC4Q9Y696 253 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 COMMD10Q9Y6G5 202 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 M0R2C6 588 aa9.02□□□□□ -0.96
RIF1-205ENST00000444746 LARGE1O95461 756 aa9.02□□□□□ -0.96
RIF1-205ENST00000444746 MTX1Q13505 466 aa9.02□□□□□ -0.96
RIF1-205ENST00000444746 NKX1-1Q15270 411 aaPredicted RBP9.02□□□□□ -0.96
RIF1-205ENST00000444746 JDP2Q8WYK2 163 aa9.02□□□□□ -0.96
RIF1-205ENST00000444746 ANKRD2Q9GZV1 360 aa9.02□□□□□ -0.96
RIF1-205ENST00000444746 KDM6BO15054 1643 aa9.02□□□□□ -0.96
RIF1-205ENST00000444746 FANCCQ00597 558 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 TTC38Q5R3I4 469 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 NSMFQ6X4W1 530 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 KIAA0825Q8IV33 1275 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 TBC1D5Q92609 795 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 CCDC42Q96M95 316 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 GBP3Q9H0R5 595 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 CETN1Q12798 172 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 TAB3Q8N5C8 712 aaPredicted RBP9.02□□□□□ -0.97
RIF1-205ENST00000444746 NEK11Q8NG66 645 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 GPHNQ9NQX3 736 aaPredicted RBP9.02□□□□□ -0.97
RIF1-205ENST00000444746 USP40Q9NVE5 1235 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 ADAMTS12P58397 1594 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 CYLC1P35663 651 aaPredicted RBP9.02□□□□□ -0.97
RIF1-205ENST00000444746 CACNB1Q02641 598 aaPredicted RBP9.02□□□□□ -0.97
RIF1-205ENST00000444746 DESP17661 470 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 PPARAQ07869 468 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 KIAA0753Q2KHM9 967 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 PUS7Q96PZ0 661 aaKnown RBP9.02□□□□□ -0.97
RIF1-205ENST00000444746 EDC4Q6P2E9 1401 aaKnown RBP9.02□□□□□ -0.97
RIF1-205ENST00000444746 GNAT2P19087 354 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 HOOK3Q86VS8 718 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 IGSF22Q8N9C0 903 aa9.02□□□□□ -0.97
RIF1-205ENST00000444746 KIF2AO00139 706 aaPredicted RBP9.01□□□□□ -0.97
RIF1-205ENST00000444746 NEMFO60524 1076 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 GAS2L3Q86XJ1 694 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 LARGE2Q8N3Y3 721 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 ZFYVE9O95405 1425 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 CLRN2A0PK11 232 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 HSF2BPO75031 334 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 NR1I2O75469 434 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 TCIRG1Q13488 830 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 SV2BQ7L1I2 683 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 TMEM87AQ8NBN3 555 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 LPIN2Q92539 896 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 CARD6Q9BX69 1037 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 CLSTN2Q9H4D0 955 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 ZBTB1Q9Y2K1 713 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 RIOK3O14730 519 aaKnown RBP9.01□□□□□ -0.97
RIF1-205ENST00000444746 CTSWP56202 376 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 SMC1AQ14683 1233 aaKnown RBP9.01□□□□□ -0.97
RIF1-205ENST00000444746 MAP9Q49MG5 647 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 GRAMD1CQ8IYS0 662 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 ZEB2O60315 1214 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 ZNF202O95125 648 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 USP28Q96RU2 1077 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 ANGEL1Q9UNK9 670 aaKnown RBP9.01□□□□□ -0.97
RIF1-205ENST00000444746 TEX14Q8IWB6 1497 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 PDIA4P13667 645 aaKnown RBP9.01□□□□□ -0.97
RIF1-205ENST00000444746 CHRNDQ07001 517 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 CCDC122Q5T0U0 273 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 GPATCH11Q8N954 259 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 BAG1Q99933 345 aaPredicted RBP9.01□□□□□ -0.97
RIF1-205ENST00000444746 DESI2Q9BSY9 194 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 SRP68Q9UHB9 627 aaKnown RBP9.01□□□□□ -0.97
RIF1-205ENST00000444746 PRR36Q9H6K5 1346 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 CCDC175P0C221 793 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 HSPA4P34932 840 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 CLCN1P35523 988 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 BIRC3Q13489 604 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 GPT2Q8TD30 523 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 SNX29Q8TEQ0 813 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 GNAQP50148 359 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 ATRIPQ8WXE1 791 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 SLF1Q9BQI6 1058 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 USTQ9Y2C2 406 aa9.01□□□□□ -0.97
RIF1-205ENST00000444746 ZMYM4Q5VZL5 1548 aa9□□□□□ -0.97
RIF1-205ENST00000444746 CSPG5O95196 566 aa9□□□□□ -0.97
RIF1-205ENST00000444746 MYL5Q02045 173 aa9□□□□□ -0.97
RIF1-205ENST00000444746 CCDC114Q96M63 670 aa9□□□□□ -0.97
RIF1-205ENST00000444746 TECP42680 631 aa9□□□□□ -0.97
RIF1-205ENST00000444746 EAPPQ56P03 285 aaPredicted RBP9□□□□□ -0.97
RIF1-205ENST00000444746 NLRC4Q9NPP4 1024 aa9□□□□□ -0.97
RIF1-205ENST00000444746 GJB4Q9NTQ9 266 aa9□□□□□ -0.97
RIF1-205ENST00000444746 WDR70Q9NW82 654 aa9□□□□□ -0.97
RIF1-205ENST00000444746 RAD50Q92878 1312 aa9□□□□□ -0.97
RIF1-205ENST00000444746 EIF4G3O43432 1585 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms