RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 IGFBP4P22692 258 aa13.17□□□□□ -0.3
HDAC8-215ENST00000444609 HDLBPQ00341 1268 aaKnown RBP13.17□□□□□ -0.3
HDAC8-215ENST00000444609 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
HDAC8-215ENST00000444609 TRMT44Q8IYL2 757 aaKnown RBP13.17□□□□□ -0.3
HDAC8-215ENST00000444609 TMOD2Q9NZR1 351 aa13.17□□□□□ -0.3
HDAC8-215ENST00000444609 LTBP2Q14767 1821 aa13.17□□□□□ -0.3
HDAC8-215ENST00000444609 RPAP1Q9BWH6 1393 aaPredicted RBP13.17□□□□□ -0.3
HDAC8-215ENST00000444609 TRIM43BA6NCK2 446 aa13.16□□□□□ -0.3
HDAC8-215ENST00000444609 PRR33A8MZF0 331 aa13.16□□□□□ -0.3
HDAC8-215ENST00000444609 ITGA6P23229 1130 aa13.16□□□□□ -0.3
HDAC8-215ENST00000444609 GCLCP48506 637 aaPredicted RBP13.16□□□□□ -0.3
HDAC8-215ENST00000444609 SH3RF1Q7Z6J0 888 aa13.16□□□□□ -0.3
HDAC8-215ENST00000444609 PIAS4Q8N2W9 510 aaPredicted RBP13.16□□□□□ -0.3
HDAC8-215ENST00000444609 TRIM43Q96BQ3 446 aaPredicted RBP13.16□□□□□ -0.3
HDAC8-215ENST00000444609 PDLIM7Q9NR12 457 aa13.16□□□□□ -0.3
HDAC8-215ENST00000444609 AGTPBP1Q9UPW5 1226 aa13.16□□□□□ -0.3
HDAC8-215ENST00000444609 DOCK3Q8IZD9 2030 aa13.16□□□□□ -0.3
HDAC8-215ENST00000444609 MAST2Q6P0Q8 1798 aa13.15□□□□□ -0.3
HDAC8-215ENST00000444609 DNM1LO00429 736 aa13.15□□□□□ -0.3
HDAC8-215ENST00000444609 PTPRAP18433 802 aa13.15□□□□□ -0.3
HDAC8-215ENST00000444609 GRIK5Q16478 980 aa13.15□□□□□ -0.3
HDAC8-215ENST00000444609 SLC39A5Q6ZMH5 540 aa13.15□□□□□ -0.3
HDAC8-215ENST00000444609 TDRD7Q8NHU6 1098 aaKnown RBP13.15□□□□□ -0.3
HDAC8-215ENST00000444609 TIMELESSQ9UNS1 1208 aa13.15□□□□□ -0.3
HDAC8-215ENST00000444609 HOXB7P09629 217 aa13.14□□□□□ -0.31
HDAC8-215ENST00000444609 ZKSCAN1P17029 563 aaPredicted RBP13.14□□□□□ -0.31
HDAC8-215ENST00000444609 ITGB8P26012 769 aa13.14□□□□□ -0.31
HDAC8-215ENST00000444609 APOBEC3HQ6NTF7 200 aaKnown RBP13.14□□□□□ -0.31
HDAC8-215ENST00000444609 FAM151AQ8WW52 585 aa13.14□□□□□ -0.31
HDAC8-215ENST00000444609 FBXL18Q96ME1 805 aa13.14□□□□□ -0.31
HDAC8-215ENST00000444609 ZDHHC15Q96MV8 337 aa13.14□□□□□ -0.31
HDAC8-215ENST00000444609 NUDT12Q9BQG2 462 aa13.14□□□□□ -0.31
HDAC8-215ENST00000444609 METTL22Q9BUU2 404 aaPredicted RBP13.14□□□□□ -0.31
HDAC8-215ENST00000444609 KCNH6Q9H252 994 aa13.14□□□□□ -0.31
HDAC8-215ENST00000444609 PNMA3Q9UL41 463 aa13.14□□□□□ -0.31
HDAC8-215ENST00000444609 TCF20Q9UGU0 1960 aaKnown RBP13.14□□□□□ -0.31
HDAC8-215ENST00000444609 ERC2O15083 957 aa13.13□□□□□ -0.31
HDAC8-215ENST00000444609 TLL1O43897 1013 aa13.13□□□□□ -0.31
HDAC8-215ENST00000444609 PBX2P40425 430 aa13.13□□□□□ -0.31
HDAC8-215ENST00000444609 SNX17Q15036 470 aa13.13□□□□□ -0.31
HDAC8-215ENST00000444609 TRIM60Q495X7 471 aa13.13□□□□□ -0.31
HDAC8-215ENST00000444609 SCYL3Q8IZE3 742 aa13.13□□□□□ -0.31
HDAC8-215ENST00000444609 SOCS4Q8WXH5 440 aa13.13□□□□□ -0.31
HDAC8-215ENST00000444609 LPAR1Q92633 364 aa13.13□□□□□ -0.31
HDAC8-215ENST00000444609 TEKT1Q969V4 418 aa13.13□□□□□ -0.31
HDAC8-215ENST00000444609 MRIQ9BWK5 157 aa13.13□□□□□ -0.31
HDAC8-215ENST00000444609 PBX4Q9BYU1 374 aa13.13□□□□□ -0.31
HDAC8-215ENST00000444609 PHAXQ9H814 394 aaKnown RBP13.13□□□□□ -0.31
HDAC8-215ENST00000444609 PICK1Q9NRD5 415 aa13.13□□□□□ -0.31
HDAC8-215ENST00000444609 DAGLAQ9Y4D2 1042 aa13.13□□□□□ -0.31
HDAC8-215ENST00000444609 PHF20L1A8MW92 1017 aa13.12□□□□□ -0.31
HDAC8-215ENST00000444609 CHL1O00533 1208 aa13.12□□□□□ -0.31
HDAC8-215ENST00000444609 ST18O60284 1047 aa13.12□□□□□ -0.31
HDAC8-215ENST00000444609 CCL14Q16627 93 aa13.12□□□□□ -0.31
HDAC8-215ENST00000444609 TREML2Q5T2D2 321 aa13.12□□□□□ -0.31
HDAC8-215ENST00000444609 USP6NLQ92738 828 aa13.12□□□□□ -0.31
HDAC8-215ENST00000444609 DDX20Q9UHI6 824 aaKnown RBP13.12□□□□□ -0.31
HDAC8-215ENST00000444609 PPP2R1AP30153 589 aa13.11□□□□□ -0.31
HDAC8-215ENST00000444609 MORF4L1Q9UBU8 362 aa13.11□□□□□ -0.31
HDAC8-215ENST00000444609 DLG5Q8TDM6 1919 aa13.11□□□□□ -0.31
HDAC8-215ENST00000444609 TRIM75PA6NK02 468 aa13.1□□□□□ -0.31
HDAC8-215ENST00000444609 IGKV5-2P06315 115 aa13.1□□□□□ -0.31
HDAC8-215ENST00000444609 CSF1RP07333 972 aa13.1□□□□□ -0.31
HDAC8-215ENST00000444609 C1orf53Q5VUE5 145 aa13.1□□□□□ -0.31
HDAC8-215ENST00000444609 HERVK_113Q902F9 699 aa13.1□□□□□ -0.31
HDAC8-215ENST00000444609 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-215ENST00000444609 TACC3Q9Y6A5 838 aa13.1□□□□□ -0.31
HDAC8-215ENST00000444609 GRXCR1A8MXD5 290 aa13.09□□□□□ -0.31
HDAC8-215ENST00000444609 MSCO60682 206 aa13.09□□□□□ -0.31
HDAC8-215ENST00000444609 RIPK4P57078 832 aa13.09□□□□□ -0.31
HDAC8-215ENST00000444609 FPGSQ05932 587 aa13.09□□□□□ -0.31
HDAC8-215ENST00000444609 CCDC129Q6ZRS4 1044 aa13.09□□□□□ -0.31
HDAC8-215ENST00000444609 PLA2G12BQ9BX93 195 aa13.09□□□□□ -0.31
HDAC8-215ENST00000444609 SPEF2Q9C093 1822 aa13.09□□□□□ -0.31
HDAC8-215ENST00000444609 H7C1W4 665 aa13.08□□□□□ -0.32
HDAC8-215ENST00000444609 HIBADHP31937 336 aaKnown RBP13.08□□□□□ -0.32
HDAC8-215ENST00000444609 TCP10Q12799 353 aa13.08□□□□□ -0.32
HDAC8-215ENST00000444609 GJC2Q5T442 439 aaPredicted RBP13.08□□□□□ -0.32
HDAC8-215ENST00000444609 PROCA1Q8NCQ7 364 aaPredicted RBP13.08□□□□□ -0.32
HDAC8-215ENST00000444609 ARRDC4Q8NCT1 418 aa13.08□□□□□ -0.32
HDAC8-215ENST00000444609 FAM84BQ96KN1 310 aaPredicted RBP13.08□□□□□ -0.32
HDAC8-215ENST00000444609 UIMC1Q96RL1 719 aa13.08□□□□□ -0.32
HDAC8-215ENST00000444609 CD320Q9NPF0 282 aa13.08□□□□□ -0.32
HDAC8-215ENST00000444609 MAPK8IP3Q9UPT6 1336 aa13.08□□□□□ -0.32
HDAC8-215ENST00000444609 ANKRD18BA2A2Z9 1011 aa13.07□□□□□ -0.32
HDAC8-215ENST00000444609 KIAA0355O15063 1070 aa13.07□□□□□ -0.32
HDAC8-215ENST00000444609 RGS2P41220 211 aa13.07□□□□□ -0.32
HDAC8-215ENST00000444609 GYG1P46976 350 aa13.07□□□□□ -0.32
HDAC8-215ENST00000444609 TLE2Q04725 743 aa13.07□□□□□ -0.32
HDAC8-215ENST00000444609 SKIV2LQ15477 1246 aaKnown RBP13.07□□□□□ -0.32
HDAC8-215ENST00000444609 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
HDAC8-215ENST00000444609 MICALL1Q8N3F8 863 aa13.07□□□□□ -0.32
HDAC8-215ENST00000444609 ASCC2Q9H1I8 757 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-215ENST00000444609 PNNQ9H307 717 aaKnown RBP13.07□□□□□ -0.32
HDAC8-215ENST00000444609 PLXNB2O15031 1838 aa13.06□□□□□ -0.32
HDAC8-215ENST00000444609 RAG1P15918 1043 aa13.06□□□□□ -0.32
HDAC8-215ENST00000444609 PABPC4Q13310 644 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDAC8-215ENST00000444609 MORN1Q5T089 497 aa13.06□□□□□ -0.32
HDAC8-215ENST00000444609 RASIP1Q5U651 963 aa13.06□□□□□ -0.32
HDAC8-215ENST00000444609 MFSD14CQ5VZR4 134 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms