RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 BCL11AQ9H165 835 aa22.7■■□□□ 1.22
CCDC188-202ENST00000444532 DDX4Q9NQI0 724 aaKnown RBP22.7■■□□□ 1.22
CCDC188-202ENST00000444532 PCDHB15Q9Y5E8 787 aa22.7■■□□□ 1.22
CCDC188-202ENST00000444532 DOCK2Q92608 1830 aa22.69■■□□□ 1.22
CCDC188-202ENST00000444532 IDH1O75874 414 aaKnown RBP22.69■■□□□ 1.22
CCDC188-202ENST00000444532 MAP3K12Q12852 859 aa22.69■■□□□ 1.22
CCDC188-202ENST00000444532 PICALMQ13492 652 aa22.69■■□□□ 1.22
CCDC188-202ENST00000444532 ZSCAN29Q8IWY8 852 aaPredicted RBP22.69■■□□□ 1.22
CCDC188-202ENST00000444532 OPTNQ96CV9 577 aa22.69■■□□□ 1.22
CCDC188-202ENST00000444532 ZNF112Q9UJU3 913 aa22.69■■□□□ 1.22
CCDC188-202ENST00000444532 GJA5P36382 358 aa22.68■■□□□ 1.22
CCDC188-202ENST00000444532 TNS4Q8IZW8 715 aa22.68■■□□□ 1.22
CCDC188-202ENST00000444532 ANTXR1Q9H6X2 564 aa22.68■■□□□ 1.22
CCDC188-202ENST00000444532 NDUFB9Q9Y6M9 179 aa22.68■■□□□ 1.22
CCDC188-202ENST00000444532 ATP5JP18859 108 aa22.67■■□□□ 1.22
CCDC188-202ENST00000444532 CYP7A1P22680 504 aa22.67■■□□□ 1.22
CCDC188-202ENST00000444532 AAMPQ13685 434 aa22.67■■□□□ 1.22
CCDC188-202ENST00000444532 SH3BP5LQ7L8J4 393 aa22.67■■□□□ 1.22
CCDC188-202ENST00000444532 TEX11Q8IYF3 940 aa22.67■■□□□ 1.22
CCDC188-202ENST00000444532 ZKSCAN4Q969J2 545 aaPredicted RBP22.67■■□□□ 1.22
CCDC188-202ENST00000444532 AATFQ9NY61 560 aaKnown RBP eCLIP22.67■■□□□ 1.22
CCDC188-202ENST00000444532 ATRNL1Q5VV63 1379 aa22.66■■□□□ 1.22
CCDC188-202ENST00000444532 DDTLA6NHG4 134 aaPredicted RBP22.66■■□□□ 1.22
CCDC188-202ENST00000444532 SMARCA5O60264 1052 aaPredicted RBP22.66■■□□□ 1.22
CCDC188-202ENST00000444532 ALDH1A1P00352 501 aa22.66■■□□□ 1.22
CCDC188-202ENST00000444532 MAP3K10Q02779 954 aa22.66■■□□□ 1.22
CCDC188-202ENST00000444532 ADGRA1Q86SQ6 560 aa22.66■■□□□ 1.22
CCDC188-202ENST00000444532 ERO1BQ86YB8 467 aa22.66■■□□□ 1.22
CCDC188-202ENST00000444532 CERS3Q8IU89 383 aa22.66■■□□□ 1.22
CCDC188-202ENST00000444532 SH3RF3Q8TEJ3 882 aaPredicted RBP22.66■■□□□ 1.22
CCDC188-202ENST00000444532 SNCAIPQ9Y6H5 919 aa22.66■■□□□ 1.22
CCDC188-202ENST00000444532 COL2A1P02458 1487 aaPredicted RBP22.66■■□□□ 1.22
CCDC188-202ENST00000444532 SPDYE5A6NIY4 337 aa22.65■■□□□ 1.22
CCDC188-202ENST00000444532 MAGEB6Q8N7X4 407 aa22.65■■□□□ 1.22
CCDC188-202ENST00000444532 OSBPL5Q9H0X9 879 aaPredicted RBP22.65■■□□□ 1.22
CCDC188-202ENST00000444532 TESPA1A2RU30 521 aaPredicted RBP22.64■■□□□ 1.21
CCDC188-202ENST00000444532 INPP5BP32019 993 aa22.64■■□□□ 1.21
CCDC188-202ENST00000444532 IFNL1Q8IU54 200 aa22.64■■□□□ 1.21
CCDC188-202ENST00000444532 CNKSR2Q8WXI2 1034 aa22.64■■□□□ 1.21
CCDC188-202ENST00000444532 DNAJC2Q99543 621 aaKnown RBP22.64■■□□□ 1.21
CCDC188-202ENST00000444532 CFHR5Q9BXR6 569 aa22.64■■□□□ 1.21
CCDC188-202ENST00000444532 FOCADQ5VW36 1801 aa22.64■■□□□ 1.21
CCDC188-202ENST00000444532 CASP8AP2Q9UKL3 1982 aa22.63■■□□□ 1.21
CCDC188-202ENST00000444532 CDK5RAP2Q96SN8 1893 aa22.63■■□□□ 1.21
CCDC188-202ENST00000444532 GOLIM4O00461 696 aa22.63■■□□□ 1.21
CCDC188-202ENST00000444532 GTF2A2P52657 109 aa22.63■■□□□ 1.21
CCDC188-202ENST00000444532 NOL9Q5SY16 702 aaKnown RBP22.63■■□□□ 1.21
CCDC188-202ENST00000444532 OTUD7BQ6GQQ9 843 aa22.63■■□□□ 1.21
CCDC188-202ENST00000444532 OTUD5Q96G74 571 aa22.63■■□□□ 1.21
CCDC188-202ENST00000444532 MS4A4AQ96JQ5 239 aa22.63■■□□□ 1.21
CCDC188-202ENST00000444532 BOLA2Q9H3K6 86 aa22.63■■□□□ 1.21
CCDC188-202ENST00000444532 PHF20L1A8MW92 1017 aa22.62■■□□□ 1.21
CCDC188-202ENST00000444532 TBC1D12O60347 775 aa22.62■■□□□ 1.21
CCDC188-202ENST00000444532 PPATQ06203 517 aa22.62■■□□□ 1.21
CCDC188-202ENST00000444532 IFFO2Q5TF58 517 aa22.62■■□□□ 1.21
CCDC188-202ENST00000444532 TGFBRAP1Q8WUH2 860 aa22.62■■□□□ 1.21
CCDC188-202ENST00000444532 HAUS7Q99871 368 aa22.62■■□□□ 1.21
CCDC188-202ENST00000444532 DHX36Q9H2U1 1008 aaKnown RBP22.62■■□□□ 1.21
CCDC188-202ENST00000444532 PAG1Q9NWQ8 432 aa22.62■■□□□ 1.21
CCDC188-202ENST00000444532 TBC1D8O95759 1140 aa22.61■■□□□ 1.21
CCDC188-202ENST00000444532 PPIL2Q13356 520 aa22.61■■□□□ 1.21
CCDC188-202ENST00000444532 NOM1Q5C9Z4 860 aaKnown RBP22.61■■□□□ 1.21
CCDC188-202ENST00000444532 SLC9C2Q5TAH2 1124 aa22.61■■□□□ 1.21
CCDC188-202ENST00000444532 GPATCH3Q96I76 525 aa22.61■■□□□ 1.21
CCDC188-202ENST00000444532 ECHDC1Q9NTX5 307 aa22.61■■□□□ 1.21
CCDC188-202ENST00000444532 DYNLL1P63167 89 aaKnown RBP22.6■■□□□ 1.21
CCDC188-202ENST00000444532 MIGA1Q8NAN2 632 aa22.6■■□□□ 1.21
CCDC188-202ENST00000444532 IGF2BP3O00425 579 aaKnown RBP eCLIP22.59■■□□□ 1.21
CCDC188-202ENST00000444532 CTNND1O60716 968 aaKnown RBP22.59■■□□□ 1.21
CCDC188-202ENST00000444532 PDE6AP16499 860 aa22.59■■□□□ 1.21
CCDC188-202ENST00000444532 HDAC1Q13547 482 aaPredicted RBP22.59■■□□□ 1.21
CCDC188-202ENST00000444532 PTPN18Q99952 460 aa22.59■■□□□ 1.21
CCDC188-202ENST00000444532 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.59■■□□□ 1.21
CCDC188-202ENST00000444532 PI4KBQ9UBF8 816 aa22.59■■□□□ 1.21
CCDC188-202ENST00000444532 FLT1P17948 1338 aa22.58■■□□□ 1.21
CCDC188-202ENST00000444532 CCL15-CCL14A0A0B4J2E2 113 aa22.58■■□□□ 1.21
CCDC188-202ENST00000444532 IRF6O14896 467 aa22.58■■□□□ 1.21
CCDC188-202ENST00000444532 CETPP11597 493 aa22.58■■□□□ 1.21
CCDC188-202ENST00000444532 SNAPC2Q13487 334 aa22.58■■□□□ 1.21
CCDC188-202ENST00000444532 CCL15Q16663 113 aa22.58■■□□□ 1.21
CCDC188-202ENST00000444532 MAPKAPK5Q8IW41 473 aa22.58■■□□□ 1.21
CCDC188-202ENST00000444532 SCYL3Q8IZE3 742 aa22.58■■□□□ 1.21
CCDC188-202ENST00000444532 EDC3Q96F86 508 aaKnown RBP22.58■■□□□ 1.21
CCDC188-202ENST00000444532 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.58■■□□□ 1.21
CCDC188-202ENST00000444532 HERC5Q9UII4 1024 aaKnown RBP22.58■■□□□ 1.21
CCDC188-202ENST00000444532 BRI3BPQ8WY22 251 aa22.57■■□□□ 1.2
CCDC188-202ENST00000444532 PICK1Q9NRD5 415 aa22.57■■□□□ 1.2
CCDC188-202ENST00000444532 SUPT16HQ9Y5B9 1047 aaKnown RBP22.57■■□□□ 1.2
CCDC188-202ENST00000444532 ZNF532Q9HCE3 1301 aa22.57■■□□□ 1.2
CCDC188-202ENST00000444532 MAGEB6P1A0A0J9YX57 407 aa22.56■■□□□ 1.2
CCDC188-202ENST00000444532 TCRBV5S4A2TA0A5A2 114 aa22.56■■□□□ 1.2
CCDC188-202ENST00000444532 GPR25O00155 361 aa22.56■■□□□ 1.2
CCDC188-202ENST00000444532 USP5P45974 858 aa22.56■■□□□ 1.2
CCDC188-202ENST00000444532 FOXP4Q8IVH2 680 aaPredicted RBP22.56■■□□□ 1.2
CCDC188-202ENST00000444532 GCC1Q96CN9 775 aa22.56■■□□□ 1.2
CCDC188-202ENST00000444532 RIOK1Q9BRS2 568 aaKnown RBP22.56■■□□□ 1.2
CCDC188-202ENST00000444532 KCNH4Q9UQ05 1017 aa22.56■■□□□ 1.2
CCDC188-202ENST00000444532 SLURP2P0DP57 97 aa22.55■■□□□ 1.2
CCDC188-202ENST00000444532 METTL16Q86W50 562 aaKnown RBP22.55■■□□□ 1.2
CCDC188-202ENST00000444532 ZBTB47Q9UFB7 747 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms