RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 EPS15P42566 896 aa12.13□□□□□ -0.47
TOP3B-210ENST00000444502 HEATR3Q7Z4Q2 680 aa12.13□□□□□ -0.47
TOP3B-210ENST00000444502 CNNM3Q8NE01 707 aa12.13□□□□□ -0.47
TOP3B-210ENST00000444502 SDR42E1Q8WUS8 393 aa12.13□□□□□ -0.47
TOP3B-210ENST00000444502 FTOQ9C0B1 505 aaKnown RBP eCLIP12.13□□□□□ -0.47
TOP3B-210ENST00000444502 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.13□□□□□ -0.47
TOP3B-210ENST00000444502 M0R2C6 588 aa12.13□□□□□ -0.47
TOP3B-210ENST00000444502 IPO7O95373 1038 aaKnown RBP12.13□□□□□ -0.47
TOP3B-210ENST00000444502 ZMYM1Q5SVZ6 1142 aa12.13□□□□□ -0.47
TOP3B-210ENST00000444502 CNNM2Q9H8M5 875 aa12.13□□□□□ -0.47
TOP3B-210ENST00000444502 ZNF408Q9H9D4 720 aa12.13□□□□□ -0.47
TOP3B-210ENST00000444502 RSPH14Q9UHP6 348 aa12.13□□□□□ -0.47
TOP3B-210ENST00000444502 PTGS1P23219 599 aa12.13□□□□□ -0.47
TOP3B-210ENST00000444502 KRT222Q8N1A0 295 aa12.13□□□□□ -0.47
TOP3B-210ENST00000444502 AOPEPQ8N6M6 819 aa12.13□□□□□ -0.47
TOP3B-210ENST00000444502 NR1I2O75469 434 aa12.12□□□□□ -0.47
TOP3B-210ENST00000444502 ADD1P35611 737 aaKnown RBP12.12□□□□□ -0.47
TOP3B-210ENST00000444502 USP28Q96RU2 1077 aa12.12□□□□□ -0.47
TOP3B-210ENST00000444502 TGFBRAP1Q8WUH2 860 aa12.12□□□□□ -0.47
TOP3B-210ENST00000444502 TTF2Q9UNY4 1162 aaKnown RBP12.12□□□□□ -0.47
TOP3B-210ENST00000444502 SYKP43405 635 aa12.12□□□□□ -0.47
TOP3B-210ENST00000444502 CEP89Q96ST8 783 aa12.12□□□□□ -0.47
TOP3B-210ENST00000444502 PUS7LQ9H0K6 701 aaKnown RBP12.12□□□□□ -0.47
TOP3B-210ENST00000444502 TSPYL1Q9H0U9 437 aa12.12□□□□□ -0.47
TOP3B-210ENST00000444502 PXDNQ92626 1479 aa12.12□□□□□ -0.47
TOP3B-210ENST00000444502 SOS2Q07890 1332 aaPredicted RBP12.12□□□□□ -0.47
TOP3B-210ENST00000444502 A0A087WWV3 80 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 GNAT2P19087 354 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 TOB2Q14106 344 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-210ENST00000444502 WDR66Q8TBY9 1149 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 hCG_1642624A0A1W2PR95 340 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 CYP19A1P11511 503 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-210ENST00000444502 EN1Q05925 392 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-210ENST00000444502 ZNF710Q8N1W2 664 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 ANGEL1Q9UNK9 670 aaKnown RBP12.11□□□□□ -0.47
TOP3B-210ENST00000444502 REREQ9P2R6 1566 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 ZBTB7AO95365 584 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 PLCG2P16885 1265 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 ALDH1B1P30837 517 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 PDE6BP35913 854 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 RBM6P78332 1123 aaKnown RBP12.11□□□□□ -0.47
TOP3B-210ENST00000444502 KCNG4Q8TDN1 519 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 TEX2Q8IWB9 1127 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 TTLL11Q8NHH1 800 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 LLPHQ9BRT6 129 aaKnown RBP12.11□□□□□ -0.47
TOP3B-210ENST00000444502 CBX8Q9HC52 389 aa12.11□□□□□ -0.47
TOP3B-210ENST00000444502 PFKFB2O60825 505 aa12.1□□□□□ -0.47
TOP3B-210ENST00000444502 PDE6AP16499 860 aa12.1□□□□□ -0.47
TOP3B-210ENST00000444502 PDIA3P30101 505 aaKnown RBP12.1□□□□□ -0.47
TOP3B-210ENST00000444502 FOXO4P98177 505 aa12.1□□□□□ -0.47
TOP3B-210ENST00000444502 CLEC17AQ6ZS10 378 aa12.1□□□□□ -0.47
TOP3B-210ENST00000444502 TMC6Q7Z403 805 aa12.1□□□□□ -0.47
TOP3B-210ENST00000444502 ARHGEF1Q92888 912 aaKnown RBP12.1□□□□□ -0.47
TOP3B-210ENST00000444502 DBNDD1Q9H9R9 158 aa12.1□□□□□ -0.47
TOP3B-210ENST00000444502 SMTNL1A8MU46 457 aa12.1□□□□□ -0.47
TOP3B-210ENST00000444502 USP17L12C9JPN9 530 aa12.1□□□□□ -0.47
TOP3B-210ENST00000444502 USP17L21D6R901 530 aa12.1□□□□□ -0.47
TOP3B-210ENST00000444502 CMTR1Q8N1G2 835 aaKnown RBP12.1□□□□□ -0.47
TOP3B-210ENST00000444502 AK9Q5TCS8 1911 aa12.1□□□□□ -0.47
TOP3B-210ENST00000444502 LMOD1P29536 600 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-210ENST00000444502 FLAD1Q8NFF5 587 aa12.1□□□□□ -0.47
TOP3B-210ENST00000444502 ZNF804BA4D1E1 1349 aa12.1□□□□□ -0.47
TOP3B-210ENST00000444502 NCOA3Q9Y6Q9 1424 aa12.09□□□□□ -0.47
TOP3B-210ENST00000444502 RPS6KA4O75676 772 aa12.09□□□□□ -0.47
TOP3B-210ENST00000444502 TXNRD1Q16881 649 aa12.09□□□□□ -0.47
TOP3B-210ENST00000444502 FAM47AQ5JRC9 791 aa12.09□□□□□ -0.47
TOP3B-210ENST00000444502 SPECC1Q5M775 1068 aa12.09□□□□□ -0.47
TOP3B-210ENST00000444502 CLSTN2Q9H4D0 955 aa12.09□□□□□ -0.47
TOP3B-210ENST00000444502 ARHGAP23Q9P227 1491 aa12.09□□□□□ -0.47
TOP3B-210ENST00000444502 SFPQP23246 707 aaKnown RBP eCLIP12.09□□□□□ -0.47
TOP3B-210ENST00000444502 GABPB1Q06547 395 aaPredicted RBP12.09□□□□□ -0.47
TOP3B-210ENST00000444502 NSUN7Q8NE18 718 aaKnown RBP12.09□□□□□ -0.47
TOP3B-210ENST00000444502 GJB4Q9NTQ9 266 aa12.09□□□□□ -0.47
TOP3B-210ENST00000444502 FER1L4A9Z1Z3 1794 aa12.09□□□□□ -0.47
TOP3B-210ENST00000444502 NAP1L1P55209 391 aaKnown RBP12.09□□□□□ -0.47
TOP3B-210ENST00000444502 SCARF1Q14162 830 aa12.09□□□□□ -0.47
TOP3B-210ENST00000444502 ATG9AQ7Z3C6 839 aa12.09□□□□□ -0.47
TOP3B-210ENST00000444502 GPR108Q9NPR9 543 aa12.09□□□□□ -0.47
TOP3B-210ENST00000444502 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
TOP3B-210ENST00000444502 IDEP14735 1019 aa12.08□□□□□ -0.47
TOP3B-210ENST00000444502 GPS2Q13227 327 aa12.08□□□□□ -0.47
TOP3B-210ENST00000444502 TBC1D9BQ66K14 1250 aa12.08□□□□□ -0.47
TOP3B-210ENST00000444502 TMTC2Q8N394 836 aa12.08□□□□□ -0.47
TOP3B-210ENST00000444502 CUL5Q93034 780 aa12.08□□□□□ -0.47
TOP3B-210ENST00000444502 TANGO6Q9C0B7 1094 aa12.08□□□□□ -0.47
TOP3B-210ENST00000444502 UBA5Q9GZZ9 404 aa12.08□□□□□ -0.47
TOP3B-210ENST00000444502 PLS1Q14651 629 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 CNPY4Q8N129 248 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 GPCPD1Q9NPB8 672 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 CEP131Q9UPN4 1083 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 SPATA31A1Q5TZJ5 1347 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 ANKRD26Q9UPS8 1709 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 CIAO1O76071 339 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 NAPAP54920 295 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 FAM160A1Q05DH4 1040 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 GPR162Q16538 588 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 RABL6Q3YEC7 729 aaPredicted RBP12.08□□□□□ -0.48
TOP3B-210ENST00000444502 NIM1KQ8IY84 436 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 MNS1Q8NEH6 495 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 SLIT1O75093 1534 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms