RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 TBC1D12O60347 775 aa20.1■□□□□ 0.81
CTDSP1-204ENST00000443891 POLA2Q14181 598 aa20.1■□□□□ 0.81
CTDSP1-204ENST00000443891 FASTKD5Q7L8L6 764 aaKnown RBP20.1■□□□□ 0.81
CTDSP1-204ENST00000443891 ZSCAN29Q8IWY8 852 aaPredicted RBP20.1■□□□□ 0.81
CTDSP1-204ENST00000443891 TMEM106CQ9BVX2 250 aa20.1■□□□□ 0.81
CTDSP1-204ENST00000443891 PDHXO00330 501 aa20.09■□□□□ 0.81
CTDSP1-204ENST00000443891 CTNND1O60716 968 aaKnown RBP20.09■□□□□ 0.81
CTDSP1-204ENST00000443891 HOXD10P28358 340 aa20.09■□□□□ 0.81
CTDSP1-204ENST00000443891 SLC9C1Q4G0N8 1177 aa20.09■□□□□ 0.81
CTDSP1-204ENST00000443891 ZFPM1Q8IX07 1006 aa20.09■□□□□ 0.81
CTDSP1-204ENST00000443891 TMEM57Q8N5G2 664 aa20.09■□□□□ 0.81
CTDSP1-204ENST00000443891 SSH3Q8TE77 659 aa20.09■□□□□ 0.81
CTDSP1-204ENST00000443891 NSUN4Q96CB9 384 aaKnown RBP20.09■□□□□ 0.81
CTDSP1-204ENST00000443891 ZNF333Q96JL9 665 aa20.09■□□□□ 0.81
CTDSP1-204ENST00000443891 SLC45A1Q9Y2W3 748 aa20.09■□□□□ 0.81
CTDSP1-204ENST00000443891 COL2A1P02458 1487 aaPredicted RBP20.08■□□□□ 0.81
CTDSP1-204ENST00000443891 RHBDL3P58872 404 aa20.08■□□□□ 0.81
CTDSP1-204ENST00000443891 ATP8B2P98198 1209 aa20.08■□□□□ 0.81
CTDSP1-204ENST00000443891 CAP1Q01518 475 aa20.08■□□□□ 0.81
CTDSP1-204ENST00000443891 PARK7Q99497 189 aaKnown RBP20.08■□□□□ 0.81
CTDSP1-204ENST00000443891 TNRC18O15417 2968 aaPredicted RBP20.08■□□□□ 0.8
CTDSP1-204ENST00000443891 MYH2Q9UKX2 1941 aa20.08■□□□□ 0.8
CTDSP1-204ENST00000443891 PTPRAP18433 802 aa20.07■□□□□ 0.8
CTDSP1-204ENST00000443891 HNRNPUQ00839 825 aaKnown RBP eCLIP20.07■□□□□ 0.8
CTDSP1-204ENST00000443891 MOGSQ13724 837 aa20.07■□□□□ 0.8
CTDSP1-204ENST00000443891 CCDC158Q5M9N0 1113 aa20.07■□□□□ 0.8
CTDSP1-204ENST00000443891 SH3BP5LQ7L8J4 393 aa20.07■□□□□ 0.8
CTDSP1-204ENST00000443891 FTSJ3Q8IY81 847 aaKnown RBP20.07■□□□□ 0.8
CTDSP1-204ENST00000443891 ZNF512BQ96KM6 892 aaPredicted RBP20.07■□□□□ 0.8
CTDSP1-204ENST00000443891 TBC1D2Q9BYX2 928 aa20.07■□□□□ 0.8
CTDSP1-204ENST00000443891 DDX4Q9NQI0 724 aaKnown RBP20.07■□□□□ 0.8
CTDSP1-204ENST00000443891 TNNQ9UQP3 1299 aa20.07■□□□□ 0.8
CTDSP1-204ENST00000443891 PTCH2Q9Y6C5 1203 aa20.07■□□□□ 0.8
CTDSP1-204ENST00000443891 ADGRA2Q96PE1 1338 aa20.06■□□□□ 0.8
CTDSP1-204ENST00000443891 A0A0G2JLL6 359 aaPredicted RBP20.06■□□□□ 0.8
CTDSP1-204ENST00000443891 DDTLA6NHG4 134 aaPredicted RBP20.06■□□□□ 0.8
CTDSP1-204ENST00000443891 PRRT2Q7Z6L0 340 aaPredicted RBP20.06■□□□□ 0.8
CTDSP1-204ENST00000443891 LRP2BPQ9P2M1 347 aa20.06■□□□□ 0.8
CTDSP1-204ENST00000443891 AFG3L2Q9Y4W6 797 aa20.06■□□□□ 0.8
CTDSP1-204ENST00000443891 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.06■□□□□ 0.8
CTDSP1-204ENST00000443891 ZHX2Q9Y6X8 837 aa20.06■□□□□ 0.8
CTDSP1-204ENST00000443891 POTEFA5A3E0 1075 aa20.05■□□□□ 0.8
CTDSP1-204ENST00000443891 PLCG2P16885 1265 aa20.05■□□□□ 0.8
CTDSP1-204ENST00000443891 MCAMP43121 646 aa20.05■□□□□ 0.8
CTDSP1-204ENST00000443891 PICALMQ13492 652 aa20.05■□□□□ 0.8
CTDSP1-204ENST00000443891 TNNI3KQ59H18 835 aa20.05■□□□□ 0.8
CTDSP1-204ENST00000443891 ZNF384Q8TF68 577 aa20.05■□□□□ 0.8
CTDSP1-204ENST00000443891 NOL10Q9BSC4 688 aaKnown RBP20.05■□□□□ 0.8
CTDSP1-204ENST00000443891 OSBPL5Q9H0X9 879 aaPredicted RBP20.05■□□□□ 0.8
CTDSP1-204ENST00000443891 RAI14Q9P0K7 980 aa20.05■□□□□ 0.8
CTDSP1-204ENST00000443891 NOP58Q9Y2X3 529 aaKnown RBP20.05■□□□□ 0.8
CTDSP1-204ENST00000443891 FPGT-TNNI3KV9GXZ4 949 aa20.05■□□□□ 0.8
CTDSP1-204ENST00000443891 AK9Q5TCS8 1911 aa20.05■□□□□ 0.8
CTDSP1-204ENST00000443891 RBBP6Q7Z6E9 1792 aaKnown RBP20.05■□□□□ 0.8
CTDSP1-204ENST00000443891 BAG3O95817 575 aa20.04■□□□□ 0.8
CTDSP1-204ENST00000443891 OS9Q13438 667 aaPredicted RBP20.04■□□□□ 0.8
CTDSP1-204ENST00000443891 GPAT2Q6NUI2 795 aa20.04■□□□□ 0.8
CTDSP1-204ENST00000443891 GCC1Q96CN9 775 aa20.04■□□□□ 0.8
CTDSP1-204ENST00000443891 SRRDQ9UH36 339 aa20.04■□□□□ 0.8
CTDSP1-204ENST00000443891 DOCK2Q92608 1830 aa20.04■□□□□ 0.8
CTDSP1-204ENST00000443891 ZBTB7BO15156 539 aaPredicted RBP20.03■□□□□ 0.8
CTDSP1-204ENST00000443891 BCRP11274 1271 aa20.03■□□□□ 0.8
CTDSP1-204ENST00000443891 PSMC4P43686 418 aa20.03■□□□□ 0.8
CTDSP1-204ENST00000443891 TTC39AQ5SRH9 613 aa20.03■□□□□ 0.8
CTDSP1-204ENST00000443891 TMED8Q6PL24 325 aaPredicted RBP20.03■□□□□ 0.8
CTDSP1-204ENST00000443891 DHX36Q9H2U1 1008 aaKnown RBP20.03■□□□□ 0.8
CTDSP1-204ENST00000443891 CPA4Q9UI42 421 aa20.03■□□□□ 0.8
CTDSP1-204ENST00000443891 HERC5Q9UII4 1024 aaKnown RBP20.03■□□□□ 0.8
CTDSP1-204ENST00000443891 HTTP42858 3142 aa20.02■□□□□ 0.8
CTDSP1-204ENST00000443891 SURF6O75683 361 aaKnown RBP20.02■□□□□ 0.8
CTDSP1-204ENST00000443891 PPP4CP60510 307 aa20.02■□□□□ 0.8
CTDSP1-204ENST00000443891 PI16Q6UXB8 463 aa20.02■□□□□ 0.8
CTDSP1-204ENST00000443891 TBC1D9Q6ZT07 1266 aa20.02■□□□□ 0.8
CTDSP1-204ENST00000443891 ARHGAP39Q9C0H5 1083 aa20.02■□□□□ 0.8
CTDSP1-204ENST00000443891 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.02■□□□□ 0.85e-6■□□□□ 10.3
CTDSP1-204ENST00000443891 MS4A1P11836 297 aa20.01■□□□□ 0.79
CTDSP1-204ENST00000443891 FCGRTP55899 365 aa20.01■□□□□ 0.79
CTDSP1-204ENST00000443891 SLC4A8Q2Y0W8 1093 aa20.01■□□□□ 0.79
CTDSP1-204ENST00000443891 DIEXFQ68CQ4 756 aaKnown RBP20.01■□□□□ 0.79
CTDSP1-204ENST00000443891 NAA16Q6N069 864 aaPredicted RBP20.01■□□□□ 0.79
CTDSP1-204ENST00000443891 CERS3Q8IU89 383 aa20.01■□□□□ 0.79
CTDSP1-204ENST00000443891 ITPRIPQ8IWB1 547 aa20.01■□□□□ 0.79
CTDSP1-204ENST00000443891 MIER1Q8N108 512 aa20.01■□□□□ 0.79
CTDSP1-204ENST00000443891 ZBED9Q6R2W3 1325 aa20.01■□□□□ 0.79
CTDSP1-204ENST00000443891 FMNL1O95466 1100 aaPredicted RBP20■□□□□ 0.79
CTDSP1-204ENST00000443891 CAPN2P17655 700 aa20■□□□□ 0.79
CTDSP1-204ENST00000443891 EN2P19622 333 aaPredicted RBP20■□□□□ 0.79
CTDSP1-204ENST00000443891 TEX11Q8IYF3 940 aa20■□□□□ 0.79
CTDSP1-204ENST00000443891 PROCA1Q8NCQ7 364 aaPredicted RBP20■□□□□ 0.79
CTDSP1-204ENST00000443891 TRIM47Q96LD4 638 aa20■□□□□ 0.79
CTDSP1-204ENST00000443891 PI4KBQ9UBF8 816 aa20■□□□□ 0.79
CTDSP1-204ENST00000443891 OSBPP22059 807 aa19.99■□□□□ 0.79
CTDSP1-204ENST00000443891 GADL1Q6ZQY3 521 aa19.99■□□□□ 0.79
CTDSP1-204ENST00000443891 RAET1EQ8TD07 263 aa19.99■□□□□ 0.79
CTDSP1-204ENST00000443891 DBNDD2Q9BQY9 259 aa19.99■□□□□ 0.79
CTDSP1-204ENST00000443891 GINM1Q9NU53 330 aa19.99■□□□□ 0.79
CTDSP1-204ENST00000443891 PNMA3Q9UL41 463 aa19.99■□□□□ 0.79
CTDSP1-204ENST00000443891 AGTPBP1Q9UPW5 1226 aa19.99■□□□□ 0.79
CTDSP1-204ENST00000443891 KIAA0100Q14667 2235 aaKnown RBP19.99■□□□□ 0.79
CTDSP1-204ENST00000443891 CAP2P40123 477 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms