RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 SLF2Q8IX21 1173 aa17.16■□□□□ 0.34
LINC00299-202ENST00000442956 ARPP21Q9UBL0 812 aaPredicted RBP17.16■□□□□ 0.34
LINC00299-202ENST00000442956 SLX4Q8IY92 1834 aa17.16■□□□□ 0.34
LINC00299-202ENST00000442956 GPR75-ASB3A0A0A6YYF3 556 aa17.16■□□□□ 0.34
LINC00299-202ENST00000442956 PTPDC1A2A3K4 754 aa17.16■□□□□ 0.34
LINC00299-202ENST00000442956 PDIA4P13667 645 aaKnown RBP17.16■□□□□ 0.34
LINC00299-202ENST00000442956 FOXD4L6Q3SYB3 417 aaPredicted RBP17.16■□□□□ 0.34
LINC00299-202ENST00000442956 FOXD4L3Q6VB84 417 aaPredicted RBP17.16■□□□□ 0.34
LINC00299-202ENST00000442956 RAB11FIP4Q86YS3 637 aa17.16■□□□□ 0.34
LINC00299-202ENST00000442956 FAM163AQ96GL9 167 aaPredicted RBP17.16■□□□□ 0.34
LINC00299-202ENST00000442956 DBNDD1Q9H9R9 158 aa17.16■□□□□ 0.34
LINC00299-202ENST00000442956 LY9Q9HBG7 655 aa17.16■□□□□ 0.34
LINC00299-202ENST00000442956 SENP2Q9HC62 589 aa17.16■□□□□ 0.34
LINC00299-202ENST00000442956 MCM9Q9NXL9 1143 aa17.16■□□□□ 0.34
LINC00299-202ENST00000442956 ZBTB7AO95365 584 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 F13A1P00488 732 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 SBK1Q52WX2 424 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 CC2D2BQ6DHV5 1058 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 PODNQ7Z5L7 613 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 CERS3Q8IU89 383 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 CERS5Q8N5B7 392 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 ESR2Q92731 530 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 MKRN1Q9UHC7 482 aaKnown RBP17.15■□□□□ 0.34
LINC00299-202ENST00000442956 SUGT1Q9Y2Z0 365 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 C21orf2O43822 256 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 CYP2D6P10635 497 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 PCP11498 1178 aaKnown RBP17.15■□□□□ 0.34
LINC00299-202ENST00000442956 LIFRP42702 1097 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 HMGN5P82970 282 aaKnown RBP17.15■□□□□ 0.34
LINC00299-202ENST00000442956 EVX2Q03828 476 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 SART3Q15020 963 aaKnown RBP17.15■□□□□ 0.34
LINC00299-202ENST00000442956 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 SGMS1Q86VZ5 419 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 FAM184AQ8NB25 1140 aa17.15■□□□□ 0.34
LINC00299-202ENST00000442956 GAKO14976 1311 aa17.14■□□□□ 0.34
LINC00299-202ENST00000442956 DHX16O60231 1041 aaKnown RBP17.14■□□□□ 0.33
LINC00299-202ENST00000442956 FGRP09769 529 aa17.14■□□□□ 0.33
LINC00299-202ENST00000442956 APOA5Q6Q788 366 aa17.14■□□□□ 0.33
LINC00299-202ENST00000442956 TTLL6Q8N841 843 aa17.14■□□□□ 0.33
LINC00299-202ENST00000442956 TGFBRAP1Q8WUH2 860 aa17.14■□□□□ 0.33
LINC00299-202ENST00000442956 ZKSCAN3Q9BRR0 538 aa17.14■□□□□ 0.33
LINC00299-202ENST00000442956 MXD3Q9BW11 206 aa17.14■□□□□ 0.33
LINC00299-202ENST00000442956 PRDM1O75626 825 aa17.14■□□□□ 0.33
LINC00299-202ENST00000442956 USP17L8P0C7I0 530 aa17.14■□□□□ 0.33
LINC00299-202ENST00000442956 CDC37L1Q7L3B6 337 aa17.14■□□□□ 0.33
LINC00299-202ENST00000442956 KIAA1551Q9HCM1 1747 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 F8W031 263 aaPredicted RBP17.13■□□□□ 0.33
LINC00299-202ENST00000442956 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 SLC3A2P08195 630 aaKnown RBP17.13■□□□□ 0.33
LINC00299-202ENST00000442956 DPEP1P16444 411 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 PLCG2P16885 1265 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 UBAC1Q9BSL1 405 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 MTA3Q9BTC8 594 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 KCNQ5Q9NR82 932 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 ERICH2A1L162 156 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 SLC4A8Q2Y0W8 1093 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 TEX11Q8IYF3 940 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 LMBRD1Q9NUN5 540 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 TTF2Q9UNY4 1162 aaKnown RBP17.13■□□□□ 0.33
LINC00299-202ENST00000442956 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
LINC00299-202ENST00000442956 DAGLAQ9Y4D2 1042 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 ATP6V1DQ9Y5K8 247 aa17.13■□□□□ 0.33
LINC00299-202ENST00000442956 CHD4Q14839 1912 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 BAZ2AQ9UIF9 1905 aaKnown RBP17.12■□□□□ 0.33
LINC00299-202ENST00000442956 CCDC69A6NI79 296 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 CPLX1O14810 134 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 ZBTB43O43298 467 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 ECE2O60344 883 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 RANBP6O60518 1105 aaKnown RBP17.12■□□□□ 0.33
LINC00299-202ENST00000442956 PRPF40AO75400 957 aaKnown RBP17.12■□□□□ 0.33
LINC00299-202ENST00000442956 RXRAP19793 462 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 KCNA3P22001 575 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 METAP2P50579 478 aaKnown RBP eCLIP17.12■□□□□ 0.33
LINC00299-202ENST00000442956 RHBDL3P58872 404 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 WTAPQ15007 396 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 AOC3Q16853 763 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 SKOR2Q2VWA4 1001 aaPredicted RBP17.12■□□□□ 0.33
LINC00299-202ENST00000442956 MICU3Q86XE3 530 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 MAPKAPK5Q8IW41 473 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
LINC00299-202ENST00000442956 KIF3AQ9Y496 699 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 SLC12A7Q9Y666 1083 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 ORC4O43929 436 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 SUPT20HQ8NEM7 779 aa17.12■□□□□ 0.33
LINC00299-202ENST00000442956 KIAA2012Q0VF49 1180 aa17.11■□□□□ 0.33
LINC00299-202ENST00000442956 H3BQV1 296 aa17.1■□□□□ 0.33
LINC00299-202ENST00000442956 PDE4BQ07343 736 aa17.1■□□□□ 0.33
LINC00299-202ENST00000442956 CCDC93Q567U6 631 aa17.1■□□□□ 0.33
LINC00299-202ENST00000442956 IFFO2Q5TF58 517 aa17.1■□□□□ 0.33
LINC00299-202ENST00000442956 STRIP1Q5VSL9 837 aa17.1■□□□□ 0.33
LINC00299-202ENST00000442956 FERMT3Q86UX7 667 aa17.1■□□□□ 0.33
LINC00299-202ENST00000442956 AMOTL1Q8IY63 956 aa17.1■□□□□ 0.33
LINC00299-202ENST00000442956 TMTC2Q8N394 836 aa17.1■□□□□ 0.33
LINC00299-202ENST00000442956 MYL10Q9BUA6 226 aa17.1■□□□□ 0.33
LINC00299-202ENST00000442956 TNKSO95271 1327 aa17.1■□□□□ 0.33
LINC00299-202ENST00000442956 MYH2Q9UKX2 1941 aa17.1■□□□□ 0.33
LINC00299-202ENST00000442956 ADD1P35611 737 aaKnown RBP17.1■□□□□ 0.33
LINC00299-202ENST00000442956 SYNE3Q6ZMZ3 975 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms