RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 RGS3P49796 1198 aa10.38□□□□□ -0.75
TOP3B-209ENST00000442653 RASGRF1Q13972 1273 aa10.38□□□□□ -0.75
TOP3B-209ENST00000442653 MTFR1Q15390 333 aa10.38□□□□□ -0.75
TOP3B-209ENST00000442653 CCDC102BQ68D86 513 aa10.38□□□□□ -0.75
TOP3B-209ENST00000442653 GPAT2Q6NUI2 795 aa10.38□□□□□ -0.75
TOP3B-209ENST00000442653 SH3BP5LQ7L8J4 393 aa10.38□□□□□ -0.75
TOP3B-209ENST00000442653 SHISA4Q96DD7 197 aa10.38□□□□□ -0.75
TOP3B-209ENST00000442653 COPRSQ9NQ92 184 aa10.38□□□□□ -0.75
TOP3B-209ENST00000442653 SRRDQ9UH36 339 aa10.38□□□□□ -0.75
TOP3B-209ENST00000442653 DENND2AQ9ULE3 1009 aa10.38□□□□□ -0.75
TOP3B-209ENST00000442653 A0A0C4DFX4 3053 aa10.37□□□□□ -0.75
TOP3B-209ENST00000442653 MYH2Q9UKX2 1941 aa10.37□□□□□ -0.75
TOP3B-209ENST00000442653 H0YGN5 161 aa10.37□□□□□ -0.75
TOP3B-209ENST00000442653 FXR1P51114 621 aaKnown RBP eCLIP10.37□□□□□ -0.75
TOP3B-209ENST00000442653 PRMT2P55345 433 aa10.37□□□□□ -0.75
TOP3B-209ENST00000442653 TIMM10P62072 90 aa10.37□□□□□ -0.75
TOP3B-209ENST00000442653 IDI2Q9BXS1 227 aa10.37□□□□□ -0.75
TOP3B-209ENST00000442653 COLQQ9Y215 455 aaPredicted RBP10.37□□□□□ -0.75
TOP3B-209ENST00000442653 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.37□□□□□ -0.75
TOP3B-209ENST00000442653 A0A0G2JLL6 359 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-209ENST00000442653 DDTLA6NHG4 134 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-209ENST00000442653 CXCL11O14625 94 aa10.36□□□□□ -0.75
TOP3B-209ENST00000442653 ENTPD3O75355 529 aa10.36□□□□□ -0.75
TOP3B-209ENST00000442653 FMNL1O95466 1100 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-209ENST00000442653 BCRP11274 1271 aa10.36□□□□□ -0.75
TOP3B-209ENST00000442653 PTPRAP18433 802 aa10.36□□□□□ -0.75
TOP3B-209ENST00000442653 PRKCZQ05513 592 aa10.36□□□□□ -0.75
TOP3B-209ENST00000442653 PRRT2Q7Z6L0 340 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-209ENST00000442653 DZIP1Q86YF9 867 aaKnown RBP10.36□□□□□ -0.75
TOP3B-209ENST00000442653 SCYL3Q8IZE3 742 aa10.36□□□□□ -0.75
TOP3B-209ENST00000442653 ZNF384Q8TF68 577 aa10.36□□□□□ -0.75
TOP3B-209ENST00000442653 PARK7Q99497 189 aaKnown RBP10.36□□□□□ -0.75
TOP3B-209ENST00000442653 API5Q9BZZ5 524 aaKnown RBP10.36□□□□□ -0.75
TOP3B-209ENST00000442653 DDX4Q9NQI0 724 aaKnown RBP10.36□□□□□ -0.75
TOP3B-209ENST00000442653 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-209ENST00000442653 ZHX2Q9Y6X8 837 aa10.36□□□□□ -0.75
TOP3B-209ENST00000442653 MYPNQ86TC9 1320 aa10.35□□□□□ -0.75
TOP3B-209ENST00000442653 PTPRFP10586 1907 aa10.35□□□□□ -0.75
TOP3B-209ENST00000442653 A0A1B0GUL7 405 aa10.35□□□□□ -0.75
TOP3B-209ENST00000442653 CT47B1P0C2W7 299 aaPredicted RBP10.35□□□□□ -0.75
TOP3B-209ENST00000442653 GRK4P32298 578 aa10.35□□□□□ -0.75
TOP3B-209ENST00000442653 MAP3K10Q02779 954 aa10.35□□□□□ -0.75
TOP3B-209ENST00000442653 TFCP2Q12800 502 aa10.35□□□□□ -0.75
TOP3B-209ENST00000442653 PI16Q6UXB8 463 aa10.35□□□□□ -0.75
TOP3B-209ENST00000442653 CCDC84Q86UT8 332 aaPredicted RBP10.35□□□□□ -0.75
TOP3B-209ENST00000442653 ZSCAN29Q8IWY8 852 aaPredicted RBP10.35□□□□□ -0.75
TOP3B-209ENST00000442653 ZGPATQ8N5A5 531 aaKnown RBP10.35□□□□□ -0.75
TOP3B-209ENST00000442653 RAET1EQ8TD07 263 aa10.35□□□□□ -0.75
TOP3B-209ENST00000442653 XAGE2Q96GT9 111 aa10.35□□□□□ -0.75
TOP3B-209ENST00000442653 PICK1Q9NRD5 415 aa10.35□□□□□ -0.75
TOP3B-209ENST00000442653 ABCF2Q9UG63 623 aa10.35□□□□□ -0.75
TOP3B-209ENST00000442653 AFG3L2Q9Y4W6 797 aa10.35□□□□□ -0.75
TOP3B-209ENST00000442653 MROH7-TTC4A0A0A0MT08 1334 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 PDS5AQ29RF7 1337 aaKnown RBP10.34□□□□□ -0.75
TOP3B-209ENST00000442653 COL6A3P12111 3177 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 SRGAP3O43295 1099 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 CCL5P13501 91 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 HOXD10P28358 340 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 BTDP43251 543 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 RARSP54136 660 aaKnown RBP10.34□□□□□ -0.75
TOP3B-209ENST00000442653 RHBDL3P58872 404 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 MECOMQ03112 1051 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 PICALMQ13492 652 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 UBE2Q1Q7Z7E8 422 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 FAM163AQ96GL9 167 aaPredicted RBP10.34□□□□□ -0.75
TOP3B-209ENST00000442653 GABRQQ9UN88 632 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 PHIPQ8WWQ0 1821 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 MGAMO43451 1857 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 DOCK1Q14185 1865 aa10.34□□□□□ -0.75
TOP3B-209ENST00000442653 GPR75-ASB3A0A0A6YYF3 556 aa10.33□□□□□ -0.76
TOP3B-209ENST00000442653 TRIM75PA6NK02 468 aa10.33□□□□□ -0.76
TOP3B-209ENST00000442653 FAM196BA6NMK8 535 aa10.33□□□□□ -0.76
TOP3B-209ENST00000442653 CTNND1O60716 968 aaKnown RBP10.33□□□□□ -0.76
TOP3B-209ENST00000442653 GJB1P08034 283 aa10.33□□□□□ -0.76
TOP3B-209ENST00000442653 GJA8P48165 433 aa10.33□□□□□ -0.76
TOP3B-209ENST00000442653 FCGRTP55899 365 aa10.33□□□□□ -0.76
TOP3B-209ENST00000442653 MTX1Q13505 466 aa10.33□□□□□ -0.76
TOP3B-209ENST00000442653 GADL1Q6ZQY3 521 aa10.33□□□□□ -0.76
TOP3B-209ENST00000442653 TBC1D9Q6ZT07 1266 aa10.33□□□□□ -0.76
TOP3B-209ENST00000442653 FASTKD5Q7L8L6 764 aaKnown RBP10.33□□□□□ -0.76
TOP3B-209ENST00000442653 HMG20BQ9P0W2 317 aa10.33□□□□□ -0.76
TOP3B-209ENST00000442653 HDAC5Q9UQL6 1122 aa10.33□□□□□ -0.76
TOP3B-209ENST00000442653 LAMA2P24043 3122 aaKnown RBP10.33□□□□□ -0.76
TOP3B-209ENST00000442653 DNAH12Q6ZR08 3092 aa10.32□□□□□ -0.76
TOP3B-209ENST00000442653 ELNP15502 786 aa10.32□□□□□ -0.76
TOP3B-209ENST00000442653 FLT3LGP49771 235 aa10.32□□□□□ -0.76
TOP3B-209ENST00000442653 MVPQ14764 893 aaKnown RBP10.32□□□□□ -0.76
TOP3B-209ENST00000442653 TREML2Q5T2D2 321 aa10.32□□□□□ -0.76
TOP3B-209ENST00000442653 SPTY2D1Q68D10 685 aaPredicted RBP10.32□□□□□ -0.76
TOP3B-209ENST00000442653 SLF2Q8IX21 1173 aa10.32□□□□□ -0.76
TOP3B-209ENST00000442653 RNF208Q9H0X6 261 aa10.32□□□□□ -0.76
TOP3B-209ENST00000442653 UNC93B1Q9H1C4 597 aa10.32□□□□□ -0.76
TOP3B-209ENST00000442653 BIN2Q9UBW5 565 aaPredicted RBP10.32□□□□□ -0.76
TOP3B-209ENST00000442653 TNNQ9UQP3 1299 aa10.32□□□□□ -0.76
TOP3B-209ENST00000442653 AKAP2Q9Y2D5 859 aa10.32□□□□□ -0.76
TOP3B-209ENST00000442653 SLC45A1Q9Y2W3 748 aa10.32□□□□□ -0.76
TOP3B-209ENST00000442653 GNAI3P08754 354 aa10.31□□□□□ -0.76
TOP3B-209ENST00000442653 TRIM27P14373 513 aa10.31□□□□□ -0.76
TOP3B-209ENST00000442653 RRP1BQ14684 758 aaKnown RBP10.31□□□□□ -0.76
TOP3B-209ENST00000442653 CHRDL2Q6WN34 429 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms