RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CDAN1Q8IWY9 1227 aa18.21■□□□□ 0.51
CSNK1E-210ENST00000442216 TEX11Q8IYF3 940 aa18.21■□□□□ 0.51
CSNK1E-210ENST00000442216 OTUD7AQ8TE49 926 aaPredicted RBP18.21■□□□□ 0.51
CSNK1E-210ENST00000442216 DDX4Q9NQI0 724 aaKnown RBP18.21■□□□□ 0.51
CSNK1E-210ENST00000442216 TCRBV5S4A2TA0A5A2 114 aa18.2■□□□□ 0.5
CSNK1E-210ENST00000442216 FAM155AB1AL88 458 aaPredicted RBP18.2■□□□□ 0.5
CSNK1E-210ENST00000442216 CENPBP07199 599 aaPredicted RBP18.2■□□□□ 0.5
CSNK1E-210ENST00000442216 ADD2P35612 726 aa18.2■□□□□ 0.5
CSNK1E-210ENST00000442216 PDE1AP54750 535 aa18.2■□□□□ 0.5
CSNK1E-210ENST00000442216 PRKG1Q13976 671 aa18.2■□□□□ 0.5
CSNK1E-210ENST00000442216 UBE3CQ15386 1083 aa18.2■□□□□ 0.5
CSNK1E-210ENST00000442216 B4GALNT3Q6L9W6 998 aa18.2■□□□□ 0.5
CSNK1E-210ENST00000442216 ANKRD13AQ8IZ07 590 aa18.2■□□□□ 0.5
CSNK1E-210ENST00000442216 KBTBD3Q8NAB2 608 aa18.2■□□□□ 0.5
CSNK1E-210ENST00000442216 SH3RF3Q8TEJ3 882 aaPredicted RBP18.2■□□□□ 0.5
CSNK1E-210ENST00000442216 LNPKQ9C0E8 428 aa18.2■□□□□ 0.5
CSNK1E-210ENST00000442216 ZNF532Q9HCE3 1301 aa18.2■□□□□ 0.5
CSNK1E-210ENST00000442216 CEP350Q5VT06 3117 aa18.19■□□□□ 0.5
CSNK1E-210ENST00000442216 PICALMQ13492 652 aa18.19■□□□□ 0.5
CSNK1E-210ENST00000442216 LRRFIP1Q32MZ4 808 aaKnown RBP18.19■□□□□ 0.5
CSNK1E-210ENST00000442216 TSHZ3Q63HK5 1081 aa18.19■□□□□ 0.5
CSNK1E-210ENST00000442216 RASAL3Q86YV0 1011 aa18.19■□□□□ 0.5
CSNK1E-210ENST00000442216 ZFPM1Q8IX07 1006 aa18.19■□□□□ 0.5
CSNK1E-210ENST00000442216 OSBPL5Q9H0X9 879 aaPredicted RBP18.19■□□□□ 0.5
CSNK1E-210ENST00000442216 MAGEB6P1A0A0J9YX57 407 aa18.18■□□□□ 0.5
CSNK1E-210ENST00000442216 MAP3K10Q02779 954 aa18.18■□□□□ 0.5
CSNK1E-210ENST00000442216 ZSCAN29Q8IWY8 852 aaPredicted RBP18.18■□□□□ 0.5
CSNK1E-210ENST00000442216 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.18■□□□□ 0.5
CSNK1E-210ENST00000442216 CSRNP1Q96S65 589 aa18.18■□□□□ 0.5
CSNK1E-210ENST00000442216 RIOK1Q9BRS2 568 aaKnown RBP18.18■□□□□ 0.5
CSNK1E-210ENST00000442216 ZNF341Q9BYN7 854 aa18.18■□□□□ 0.5
CSNK1E-210ENST00000442216 DHX36Q9H2U1 1008 aaKnown RBP18.18■□□□□ 0.5
CSNK1E-210ENST00000442216 OSBPL3Q9H4L5 887 aa18.18■□□□□ 0.5
CSNK1E-210ENST00000442216 FZD1Q9UP38 647 aa18.18■□□□□ 0.5
CSNK1E-210ENST00000442216 DDTLA6NHG4 134 aaPredicted RBP18.17■□□□□ 0.5
CSNK1E-210ENST00000442216 ZFYP08048 801 aaPredicted RBP18.17■□□□□ 0.5
CSNK1E-210ENST00000442216 DYNLL1P63167 89 aaKnown RBP18.17■□□□□ 0.5
CSNK1E-210ENST00000442216 MAP3K9P80192 1104 aa18.17■□□□□ 0.5
CSNK1E-210ENST00000442216 MAP2K1Q02750 393 aaPredicted RBP18.17■□□□□ 0.5
CSNK1E-210ENST00000442216 SH3BP5LQ7L8J4 393 aa18.17■□□□□ 0.5
CSNK1E-210ENST00000442216 TICAM2Q86XR7 235 aa18.17■□□□□ 0.5
CSNK1E-210ENST00000442216 REM2Q8IYK8 340 aaPredicted RBP18.17■□□□□ 0.5
CSNK1E-210ENST00000442216 MIGA1Q8NAN2 632 aa18.17■□□□□ 0.5
CSNK1E-210ENST00000442216 TGFBRAP1Q8WUH2 860 aa18.17■□□□□ 0.5
CSNK1E-210ENST00000442216 SLC10A4Q96EP9 437 aa18.17■□□□□ 0.5
CSNK1E-210ENST00000442216 NAV1Q8NEY1 1877 aa18.17■□□□□ 0.5
CSNK1E-210ENST00000442216 FLT1P17948 1338 aa18.17■□□□□ 0.5
CSNK1E-210ENST00000442216 SIPA1L1O43166 1804 aa18.16■□□□□ 0.5
CSNK1E-210ENST00000442216 TBC1D12O60347 775 aa18.16■□□□□ 0.5
CSNK1E-210ENST00000442216 GRM1Q13255 1194 aa18.16■□□□□ 0.5
CSNK1E-210ENST00000442216 ZNF112Q9UJU3 913 aa18.16■□□□□ 0.5
CSNK1E-210ENST00000442216 DDX60LQ5H9U9 1706 aaKnown RBP18.15■□□□□ 0.5
CSNK1E-210ENST00000442216 AOC2O75106 756 aa18.15■□□□□ 0.5
CSNK1E-210ENST00000442216 ZBTB48P10074 688 aaPredicted RBP18.15■□□□□ 0.5
CSNK1E-210ENST00000442216 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.15■□□□□ 0.5
CSNK1E-210ENST00000442216 MIGA2Q7L4E1 593 aa18.15■□□□□ 0.5
CSNK1E-210ENST00000442216 PLEKHM2Q8IWE5 1019 aa18.15■□□□□ 0.5
CSNK1E-210ENST00000442216 CRNKL1Q9BZJ0 848 aaKnown RBP18.15■□□□□ 0.5
CSNK1E-210ENST00000442216 CSADQ9Y600 493 aa18.15■□□□□ 0.5
CSNK1E-210ENST00000442216 RNF113AO15541 343 aaKnown RBP18.14■□□□□ 0.49
CSNK1E-210ENST00000442216 USP5P45974 858 aa18.14■□□□□ 0.49
CSNK1E-210ENST00000442216 MAPKAPK5Q8IW41 473 aa18.14■□□□□ 0.49
CSNK1E-210ENST00000442216 EVI5LQ96CN4 794 aa18.14■□□□□ 0.49
CSNK1E-210ENST00000442216 WRNIP1Q96S55 665 aa18.14■□□□□ 0.49
CSNK1E-210ENST00000442216 PI4KBQ9UBF8 816 aa18.14■□□□□ 0.49
CSNK1E-210ENST00000442216 ATAD5Q96QE3 1844 aa18.14■□□□□ 0.49
CSNK1E-210ENST00000442216 DOCK1Q14185 1865 aa18.14■□□□□ 0.49
CSNK1E-210ENST00000442216 VGLL4Q14135 290 aa18.13■□□□□ 0.49
CSNK1E-210ENST00000442216 SPRYD7Q5W111 196 aa18.13■□□□□ 0.49
CSNK1E-210ENST00000442216 APPBP2Q92624 585 aa18.13■□□□□ 0.49
CSNK1E-210ENST00000442216 CLMNQ96JQ2 1002 aa18.13■□□□□ 0.49
CSNK1E-210ENST00000442216 WBP1LQ9NX94 342 aa18.13■□□□□ 0.49
CSNK1E-210ENST00000442216 HERC5Q9UII4 1024 aaKnown RBP18.13■□□□□ 0.49
CSNK1E-210ENST00000442216 BAZ2AQ9UIF9 1905 aaKnown RBP18.13■□□□□ 0.49
CSNK1E-210ENST00000442216 NEFLP07196 543 aa18.12■□□□□ 0.49
CSNK1E-210ENST00000442216 KIF23Q02241 960 aaPredicted RBP18.12■□□□□ 0.49
CSNK1E-210ENST00000442216 NOL9Q5SY16 702 aaKnown RBP18.12■□□□□ 0.49
CSNK1E-210ENST00000442216 METTL16Q86W50 562 aaKnown RBP18.12■□□□□ 0.49
CSNK1E-210ENST00000442216 FOXP4Q8IVH2 680 aaPredicted RBP18.12■□□□□ 0.49
CSNK1E-210ENST00000442216 LCORLQ8N3X6 602 aa18.12■□□□□ 0.49
CSNK1E-210ENST00000442216 AIDAQ96BJ3 306 aa18.12■□□□□ 0.49
CSNK1E-210ENST00000442216 WNK4Q96J92 1243 aa18.12■□□□□ 0.49
CSNK1E-210ENST00000442216 FSD1Q9BTV5 496 aa18.12■□□□□ 0.49
CSNK1E-210ENST00000442216 PHF20L1A8MW92 1017 aa18.11■□□□□ 0.49
CSNK1E-210ENST00000442216 MBD4O95243 580 aa18.11■□□□□ 0.49
CSNK1E-210ENST00000442216 HLA-DOAP06340 250 aa18.11■□□□□ 0.49
CSNK1E-210ENST00000442216 ERO1BQ86YB8 467 aa18.11■□□□□ 0.49
CSNK1E-210ENST00000442216 ZIC5Q96T25 663 aa18.11■□□□□ 0.49
CSNK1E-210ENST00000442216 BEGAINQ9BUH8 593 aa18.11■□□□□ 0.49
CSNK1E-210ENST00000442216 PUS7LQ9H0K6 701 aaKnown RBP18.11■□□□□ 0.49
CSNK1E-210ENST00000442216 ELP3Q9H9T3 547 aa18.11■□□□□ 0.49
CSNK1E-210ENST00000442216 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.11■□□□□ 0.49
CSNK1E-210ENST00000442216 ATP8A2Q9NTI2 1148 aa18.11■□□□□ 0.49
CSNK1E-210ENST00000442216 SNCAIPQ9Y6H5 919 aa18.11■□□□□ 0.49
CSNK1E-210ENST00000442216 MYH8P13535 1937 aa18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 SPDYE5A6NIY4 337 aa18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 CA12O43570 354 aa18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 CTNND1O60716 968 aaKnown RBP18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 HSPA1AP0DMV8 641 aaKnown RBP18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 HSPA1BP0DMV9 641 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms