RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 COA7Q96BR5 231 aa11.62□□□□□ -0.55
ABCF1-203ENST00000441867 ZNF594Q96JF6 807 aaPredicted RBP11.62□□□□□ -0.55
ABCF1-203ENST00000441867 MROH5Q6ZUA9 1318 aa11.61□□□□□ -0.55
ABCF1-203ENST00000441867 CENPBP07199 599 aaPredicted RBP11.61□□□□□ -0.55
ABCF1-203ENST00000441867 BCAMP50895 628 aa11.61□□□□□ -0.55
ABCF1-203ENST00000441867 POTEDQ86YR6 584 aa11.61□□□□□ -0.55
ABCF1-203ENST00000441867 SMCR8Q8TEV9 937 aaPredicted RBP11.61□□□□□ -0.55
ABCF1-203ENST00000441867 TSR2Q969E8 191 aaKnown RBP11.61□□□□□ -0.55
ABCF1-203ENST00000441867 UBE2OQ9C0C9 1292 aaKnown RBP11.61□□□□□ -0.55
ABCF1-203ENST00000441867 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.61□□□□□ -0.551e-8■■□□□ 13
ABCF1-203ENST00000441867 PICK1Q9NRD5 415 aa11.61□□□□□ -0.55
ABCF1-203ENST00000441867 ZMYND8Q9ULU4 1186 aaPredicted RBP11.61□□□□□ -0.55
ABCF1-203ENST00000441867 SPTBN5Q9NRC6 3674 aaKnown RBP11.61□□□□□ -0.55
ABCF1-203ENST00000441867 A0A0G2JLL6 359 aaPredicted RBP11.6□□□□□ -0.55
ABCF1-203ENST00000441867 MAGEA10P43363 369 aaPredicted RBP11.6□□□□□ -0.55
ABCF1-203ENST00000441867 FAM109BQ6ICB4 259 aaPredicted RBP11.6□□□□□ -0.55
ABCF1-203ENST00000441867 PRRT2Q7Z6L0 340 aaPredicted RBP11.6□□□□□ -0.55
ABCF1-203ENST00000441867 TAOK2Q9UL54 1235 aa11.6□□□□□ -0.55
ABCF1-203ENST00000441867 IQSEC3Q9UPP2 1182 aaPredicted RBP11.6□□□□□ -0.55
ABCF1-203ENST00000441867 RPTORQ8N122 1335 aa11.6□□□□□ -0.55
ABCF1-203ENST00000441867 ZSWIM8A7E2V4 1837 aa11.59□□□□□ -0.55
ABCF1-203ENST00000441867 GRM8O00222 908 aa11.59□□□□□ -0.55
ABCF1-203ENST00000441867 HMGCRP04035 888 aa11.59□□□□□ -0.55
ABCF1-203ENST00000441867 EPHA10Q5JZY3 1008 aa11.59□□□□□ -0.55
ABCF1-203ENST00000441867 BEND3Q5T5X7 828 aa11.59□□□□□ -0.55
ABCF1-203ENST00000441867 DIS3LQ8TF46 1054 aaKnown RBP11.59□□□□□ -0.55
ABCF1-203ENST00000441867 C11orf49Q9H6J7 331 aa11.59□□□□□ -0.55
ABCF1-203ENST00000441867 HMX1Q9NP08 348 aaPredicted RBP11.59□□□□□ -0.55
ABCF1-203ENST00000441867 C9orf78Q9NZ63 289 aaPredicted RBP11.59□□□□□ -0.55
ABCF1-203ENST00000441867 ZHX2Q9Y6X8 837 aa11.59□□□□□ -0.55
ABCF1-203ENST00000441867 ARAP2Q8WZ64 1704 aa11.59□□□□□ -0.55
ABCF1-203ENST00000441867 GADL1Q6ZQY3 521 aa11.58□□□□□ -0.56
ABCF1-203ENST00000441867 SCYL3Q8IZE3 742 aa11.58□□□□□ -0.56
ABCF1-203ENST00000441867 WDR66Q8TBY9 1149 aa11.58□□□□□ -0.56
ABCF1-203ENST00000441867 PNMA3Q9UL41 463 aa11.58□□□□□ -0.56
ABCF1-203ENST00000441867 LAMA2P24043 3122 aaKnown RBP11.58□□□□□ -0.56
ABCF1-203ENST00000441867 SYN1P17600 705 aa11.57□□□□□ -0.56
ABCF1-203ENST00000441867 TCP10Q12799 353 aa11.57□□□□□ -0.56
ABCF1-203ENST00000441867 FAM110CQ1W6H9 321 aa11.57□□□□□ -0.56
ABCF1-203ENST00000441867 WWC1Q8IX03 1113 aa11.57□□□□□ -0.56
ABCF1-203ENST00000441867 PUS3Q9BZE2 481 aaKnown RBP11.57□□□□□ -0.56
ABCF1-203ENST00000441867 AFG3L2Q9Y4W6 797 aa11.57□□□□□ -0.56
ABCF1-203ENST00000441867 KIF16BQ96L93 1317 aa11.57□□□□□ -0.56
ABCF1-203ENST00000441867 POTEB2H3BUK9 544 aa11.56□□□□□ -0.56
ABCF1-203ENST00000441867 ALDH1L1O75891 902 aa11.56□□□□□ -0.56
ABCF1-203ENST00000441867 PDE8BO95263 885 aa11.56□□□□□ -0.56
ABCF1-203ENST00000441867 IFIT1P09914 478 aaKnown RBP11.56□□□□□ -0.56
ABCF1-203ENST00000441867 PTPRAP18433 802 aa11.56□□□□□ -0.56
ABCF1-203ENST00000441867 METTL24Q5JXM2 366 aa11.56□□□□□ -0.56
ABCF1-203ENST00000441867 CDC42EP5Q6NZY7 148 aa11.56□□□□□ -0.56
ABCF1-203ENST00000441867 WDR63Q8IWG1 891 aa11.56□□□□□ -0.56
ABCF1-203ENST00000441867 TRMT2AQ8IZ69 625 aaKnown RBP11.56□□□□□ -0.56
ABCF1-203ENST00000441867 OGDHLQ9ULD0 1010 aa11.56□□□□□ -0.56
ABCF1-203ENST00000441867 AGTPBP1Q9UPW5 1226 aa11.56□□□□□ -0.56
ABCF1-203ENST00000441867 LRRFIP2Q9Y608 721 aaKnown RBP11.56□□□□□ -0.56
ABCF1-203ENST00000441867 IL16Q14005 1332 aa11.56□□□□□ -0.56
ABCF1-203ENST00000441867 PHF20L1A8MW92 1017 aa11.55□□□□□ -0.56
ABCF1-203ENST00000441867 CTNND1O60716 968 aaKnown RBP11.55□□□□□ -0.56
ABCF1-203ENST00000441867 GCLCP48506 637 aaPredicted RBP11.55□□□□□ -0.56
ABCF1-203ENST00000441867 NFIAQ12857 509 aa11.55□□□□□ -0.56
ABCF1-203ENST00000441867 ANKRD13CQ8N6S4 541 aa11.55□□□□□ -0.56
ABCF1-203ENST00000441867 USP40Q9NVE5 1235 aa11.55□□□□□ -0.56
ABCF1-203ENST00000441867 DAGLAQ9Y4D2 1042 aa11.55□□□□□ -0.56
ABCF1-203ENST00000441867 F6X3S4 739 aa11.54□□□□□ -0.56
ABCF1-203ENST00000441867 ENTPD3O75355 529 aa11.54□□□□□ -0.56
ABCF1-203ENST00000441867 PLA2G5P39877 138 aa11.54□□□□□ -0.56
ABCF1-203ENST00000441867 MAP3K10Q02779 954 aa11.54□□□□□ -0.56
ABCF1-203ENST00000441867 PABPC4Q13310 644 aaKnown RBP eCLIP11.54□□□□□ -0.56
ABCF1-203ENST00000441867 PUM3Q15397 648 aaKnown RBP11.54□□□□□ -0.56
ABCF1-203ENST00000441867 FAM122AQ96E09 287 aa11.54□□□□□ -0.56
ABCF1-203ENST00000441867 GUCD1Q96NT3 240 aa11.54□□□□□ -0.56
ABCF1-203ENST00000441867 FAM198AQ9UFP1 575 aa11.54□□□□□ -0.56
ABCF1-203ENST00000441867 TRIM75PA6NK02 468 aa11.53□□□□□ -0.56
ABCF1-203ENST00000441867 VAMP4O75379 141 aa11.53□□□□□ -0.56
ABCF1-203ENST00000441867 SLFN5Q08AF3 891 aa11.53□□□□□ -0.56
ABCF1-203ENST00000441867 TRMT44Q8IYL2 757 aaKnown RBP11.53□□□□□ -0.56
ABCF1-203ENST00000441867 VGLL2Q8N8G2 317 aa11.53□□□□□ -0.56
ABCF1-203ENST00000441867 PROCA1Q8NCQ7 364 aaPredicted RBP11.53□□□□□ -0.56
ABCF1-203ENST00000441867 SYMPKQ92797 1274 aaKnown RBP11.53□□□□□ -0.56
ABCF1-203ENST00000441867 FAM161BQ96MY7 647 aa11.53□□□□□ -0.56
ABCF1-203ENST00000441867 LBHD1Q9BQE6 289 aaPredicted RBP11.53□□□□□ -0.56
ABCF1-203ENST00000441867 SRCIN1Q9C0H9 1055 aa11.53□□□□□ -0.56
ABCF1-203ENST00000441867 GJD2Q9UKL4 321 aa11.53□□□□□ -0.56
ABCF1-203ENST00000441867 SALL2Q9Y467 1007 aaPredicted RBP11.53□□□□□ -0.56
ABCF1-203ENST00000441867 COL6A1P12109 1028 aa11.52□□□□□ -0.57
ABCF1-203ENST00000441867 DIXDC1Q155Q3 683 aa11.52□□□□□ -0.57
ABCF1-203ENST00000441867 RABL6Q3YEC7 729 aaPredicted RBP11.52□□□□□ -0.57
ABCF1-203ENST00000441867 ZNF697Q5TEC3 545 aa11.52□□□□□ -0.57
ABCF1-203ENST00000441867 ZSCAN29Q8IWY8 852 aaPredicted RBP11.52□□□□□ -0.57
ABCF1-203ENST00000441867 IDI2Q9BXS1 227 aa11.52□□□□□ -0.57
ABCF1-203ENST00000441867 ATRNL1Q5VV63 1379 aa11.52□□□□□ -0.57
ABCF1-203ENST00000441867 E9PSI1 815 aa11.51□□□□□ -0.57
ABCF1-203ENST00000441867 LDHBP07195 334 aaKnown RBP11.51□□□□□ -0.57
ABCF1-203ENST00000441867 XRCC5P13010 732 aaKnown RBP11.51□□□□□ -0.57
ABCF1-203ENST00000441867 RGS3P49796 1198 aa11.51□□□□□ -0.57
ABCF1-203ENST00000441867 LRRC24Q50LG9 513 aa11.51□□□□□ -0.57
ABCF1-203ENST00000441867 MAP3K21Q5TCX8 1036 aa11.51□□□□□ -0.57
ABCF1-203ENST00000441867 CDCA7LQ96GN5 454 aa11.51□□□□□ -0.57
ABCF1-203ENST00000441867 KAZALD1Q96I82 304 aa11.51□□□□□ -0.57
ABCF1-203ENST00000441867 SUCLG2Q96I99 432 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms