RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 ITSN1Q15811 1721 aa17.24■□□□□ 0.35
SCAP-207ENST00000441517 PIK3AP1Q6ZUJ8 805 aa17.23■□□□□ 0.35
SCAP-207ENST00000441517 PCCAP05165 728 aaPredicted RBP17.23■□□□□ 0.35
SCAP-207ENST00000441517 TSR1Q2NL82 804 aaKnown RBP17.23■□□□□ 0.35
SCAP-207ENST00000441517 RABL6Q3YEC7 729 aaPredicted RBP17.23■□□□□ 0.35
SCAP-207ENST00000441517 ARHGAP29Q52LW3 1261 aa17.23■□□□□ 0.35
SCAP-207ENST00000441517 CCDC94Q9BW85 323 aaPredicted RBP17.23■□□□□ 0.35
SCAP-207ENST00000441517 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
SCAP-207ENST00000441517 UQCRFS1P1P0C7P4 283 aa17.23■□□□□ 0.35
SCAP-207ENST00000441517 ANTXR2P58335 489 aa17.23■□□□□ 0.35
SCAP-207ENST00000441517 NOC3LQ8WTT2 800 aaKnown RBP17.23■□□□□ 0.35
SCAP-207ENST00000441517 CCDC12Q8WUD4 166 aaPredicted RBP17.23■□□□□ 0.35
SCAP-207ENST00000441517 MEGF6O75095 1541 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 GOLGA8HP0CJ92 632 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 FAM193AP78312 1265 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 LPIN2Q92539 896 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 CGNQ9P2M7 1197 aaKnown RBP17.22■□□□□ 0.35
SCAP-207ENST00000441517 PCDHB6Q9Y5E3 794 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 SPATA31A3Q5VYP0 1347 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 MAP3K15Q6ZN16 1313 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 USP42Q9H9J4 1324 aaKnown RBP17.22■□□□□ 0.35
SCAP-207ENST00000441517 PDIA4P13667 645 aaKnown RBP17.22■□□□□ 0.35
SCAP-207ENST00000441517 ADD2P35612 726 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 TDRD7Q8NHU6 1098 aaKnown RBP17.22■□□□□ 0.35
SCAP-207ENST00000441517 NKX2-3Q8TAU0 364 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 DPF2Q92785 391 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 ANKARQ7Z5J8 1434 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 RRAGBQ5VZM2 374 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 KRI1Q8N9T8 703 aaKnown RBP17.22■□□□□ 0.35
SCAP-207ENST00000441517 CARD6Q9BX69 1037 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 ELP1O95163 1332 aa17.22■□□□□ 0.35
SCAP-207ENST00000441517 AKNAD1Q5T1N1 836 aa17.21■□□□□ 0.35
SCAP-207ENST00000441517 NUP88Q99567 741 aaPredicted RBP17.21■□□□□ 0.35
SCAP-207ENST00000441517 FUCA2Q9BTY2 467 aa17.21■□□□□ 0.35
SCAP-207ENST00000441517 ZPR1O75312 459 aa17.21■□□□□ 0.35
SCAP-207ENST00000441517 EXOSC10Q01780 885 aaKnown RBP17.21■□□□□ 0.35
SCAP-207ENST00000441517 CHRNDQ07001 517 aa17.21■□□□□ 0.35
SCAP-207ENST00000441517 IKQ13123 557 aaPredicted RBP17.21■□□□□ 0.35
SCAP-207ENST00000441517 KIF4BQ2VIQ3 1234 aa17.21■□□□□ 0.35
SCAP-207ENST00000441517 ESR2Q92731 530 aa17.21■□□□□ 0.35
SCAP-207ENST00000441517 GPKOWQ92917 476 aaPredicted RBP eCLIP17.21■□□□□ 0.359e-6■■□□□ 14.5
SCAP-207ENST00000441517 EPSTI1Q96J88 318 aa17.21■□□□□ 0.35
SCAP-207ENST00000441517 DRC1Q96MC2 740 aa17.21■□□□□ 0.35
SCAP-207ENST00000441517 TRIM34Q9BYJ4 488 aa17.21■□□□□ 0.35
SCAP-207ENST00000441517 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.35
SCAP-207ENST00000441517 N4BP3O15049 544 aa17.21■□□□□ 0.35
SCAP-207ENST00000441517 MYL5Q02045 173 aa17.21■□□□□ 0.35
SCAP-207ENST00000441517 PICALMQ13492 652 aa17.21■□□□□ 0.35
SCAP-207ENST00000441517 HEATR3Q7Z4Q2 680 aa17.21■□□□□ 0.35
SCAP-207ENST00000441517 RGPD8O14715 1765 aaPredicted RBP17.21■□□□□ 0.34
SCAP-207ENST00000441517 AGLP35573 1532 aa17.2■□□□□ 0.34
SCAP-207ENST00000441517 PHACTR2O75167 634 aa17.2■□□□□ 0.34
SCAP-207ENST00000441517 FILIP1LQ4L180 1135 aa17.2■□□□□ 0.34
SCAP-207ENST00000441517 BRAPQ7Z569 592 aa17.2■□□□□ 0.34
SCAP-207ENST00000441517 SAMSN1Q9NSI8 373 aaKnown RBP17.2■□□□□ 0.34
SCAP-207ENST00000441517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCAP-207ENST00000441517 TNKSO95271 1327 aa17.19■□□□□ 0.34
SCAP-207ENST00000441517 TRIM75PA6NK02 468 aa17.19■□□□□ 0.34
SCAP-207ENST00000441517 IDEP14735 1019 aa17.19■□□□□ 0.34
SCAP-207ENST00000441517 ZNF654Q8IZM8 581 aa17.19■□□□□ 0.34
SCAP-207ENST00000441517 C6orf229H3BNL8 230 aa17.19■□□□□ 0.34
SCAP-207ENST00000441517 CRKLP46109 303 aaKnown RBP17.19■□□□□ 0.34
SCAP-207ENST00000441517 GDAP1L1Q96MZ0 367 aa17.19■□□□□ 0.34
SCAP-207ENST00000441517 CCDC196A0A1B0GTZ2 297 aa17.19■□□□□ 0.34
SCAP-207ENST00000441517 USPL1Q5W0Q7 1092 aa17.19■□□□□ 0.34
SCAP-207ENST00000441517 AMOTL1Q8IY63 956 aa17.19■□□□□ 0.34
SCAP-207ENST00000441517 CDC5LQ99459 802 aaKnown RBP17.19■□□□□ 0.34
SCAP-207ENST00000441517 RTEL1Q9NZ71 1219 aa17.19■□□□□ 0.34
SCAP-207ENST00000441517 SRP68Q9UHB9 627 aaKnown RBP17.19■□□□□ 0.34
SCAP-207ENST00000441517 PATL2C9JE40 543 aaKnown RBP17.18■□□□□ 0.34
SCAP-207ENST00000441517 MPHOSPH10O00566 681 aaKnown RBP17.18■□□□□ 0.34
SCAP-207ENST00000441517 RIMBP2O15034 1052 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 CBFA2T2O43439 604 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 GSDMDP57764 484 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 ANKRD20A12PQ8NF67 263 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 WASF1Q92558 559 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 KRT23Q9C075 422 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 PLEKHA4Q9H4M7 779 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 SLU7O95391 586 aaKnown RBP17.18■□□□□ 0.34
SCAP-207ENST00000441517 CYP2D6P10635 497 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 NLRP12P59046 1061 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 MCM6Q14566 821 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 SMARCC2Q8TAQ2 1214 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 STRBPQ96SI9 672 aaKnown RBP17.18■□□□□ 0.34
SCAP-207ENST00000441517 TANGO6Q9C0B7 1094 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 C1orf167Q5SNV9 1468 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 GNPATO15228 680 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 CASQ1P31415 396 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 MATR3P43243 847 aaKnown RBP eCLIP17.18■□□□□ 0.34
SCAP-207ENST00000441517 FMR1NBQ8N0W7 255 aaPredicted RBP17.18■□□□□ 0.34
SCAP-207ENST00000441517 ZNF710Q8N1W2 664 aa17.18■□□□□ 0.34
SCAP-207ENST00000441517 VIRMAQ69YN4 1812 aaKnown RBP17.17■□□□□ 0.34
SCAP-207ENST00000441517 IQCB1Q15051 598 aa17.17■□□□□ 0.34
SCAP-207ENST00000441517 DHX40Q8IX18 779 aaKnown RBP17.17■□□□□ 0.34
SCAP-207ENST00000441517 MB21D2Q8IYB1 491 aaPredicted RBP17.17■□□□□ 0.34
SCAP-207ENST00000441517 CARD10Q9BWT7 1032 aa17.17■□□□□ 0.34
SCAP-207ENST00000441517 PLEKHA8P1O95397 391 aa17.17■□□□□ 0.34
SCAP-207ENST00000441517 EIF5P55010 431 aaKnown RBP17.17■□□□□ 0.34
SCAP-207ENST00000441517 PPARAQ07869 468 aa17.17■□□□□ 0.34
SCAP-207ENST00000441517 ZNF444Q8N0Y2 327 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms