RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 WDR66Q8TBY9 1149 aa15.43■□□□□ 0.06
ACTN4-204ENST00000440400 GPHNQ9NQX3 736 aaPredicted RBP15.43■□□□□ 0.06
ACTN4-204ENST00000440400 TMEM63CQ9P1W3 806 aa15.43■□□□□ 0.06
ACTN4-204ENST00000440400 KIF3AQ9Y496 699 aa15.43■□□□□ 0.06
ACTN4-204ENST00000440400 ADD1P35611 737 aaKnown RBP15.42■□□□□ 0.06
ACTN4-204ENST00000440400 PPARAQ07869 468 aa15.42■□□□□ 0.06
ACTN4-204ENST00000440400 TRDNQ13061 729 aa15.42■□□□□ 0.06
ACTN4-204ENST00000440400 UTP14CQ5TAP6 766 aaKnown RBP15.42■□□□□ 0.06
ACTN4-204ENST00000440400 TMEM51Q9NW97 253 aa15.42■□□□□ 0.06
ACTN4-204ENST00000440400 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.42■□□□□ 0.06
ACTN4-204ENST00000440400 PPP4CP60510 307 aa15.42■□□□□ 0.06
ACTN4-204ENST00000440400 ZNF804AQ7Z570 1209 aa15.42■□□□□ 0.06
ACTN4-204ENST00000440400 VPS37DQ86XT2 251 aa15.42■□□□□ 0.06
ACTN4-204ENST00000440400 RNF41Q9H4P4 317 aaPredicted RBP15.42■□□□□ 0.06
ACTN4-204ENST00000440400 DHX16O60231 1041 aaKnown RBP15.42■□□□□ 0.06
ACTN4-204ENST00000440400 NCLP19338 710 aaKnown RBP15.42■□□□□ 0.06
ACTN4-204ENST00000440400 CHST3Q7LGC8 479 aa15.42■□□□□ 0.06
ACTN4-204ENST00000440400 RAI14Q9P0K7 980 aa15.42■□□□□ 0.06
ACTN4-204ENST00000440400 FAM205AQ6ZU69 1335 aa15.41■□□□□ 0.06
ACTN4-204ENST00000440400 DYNC1I1O14576 645 aa15.41■□□□□ 0.06
ACTN4-204ENST00000440400 GADD45BO75293 160 aaPredicted RBP15.41■□□□□ 0.06
ACTN4-204ENST00000440400 CERS3Q8IU89 383 aa15.41■□□□□ 0.06
ACTN4-204ENST00000440400 ATP8A2Q9NTI2 1148 aa15.41■□□□□ 0.06
ACTN4-204ENST00000440400 TFCP2L1Q9NZI6 479 aa15.41■□□□□ 0.06
ACTN4-204ENST00000440400 ZSWIM5Q9P217 1185 aa15.41■□□□□ 0.06
ACTN4-204ENST00000440400 KLF18A0A0U1RQI7 1052 aa15.41■□□□□ 0.06
ACTN4-204ENST00000440400 DNM1Q05193 864 aaKnown RBP15.41■□□□□ 0.06
ACTN4-204ENST00000440400 NTRK3Q16288 839 aa15.41■□□□□ 0.06
ACTN4-204ENST00000440400 FOXD4L5Q5VV16 416 aaPredicted RBP15.41■□□□□ 0.06
ACTN4-204ENST00000440400 APOA5Q6Q788 366 aa15.41■□□□□ 0.06
ACTN4-204ENST00000440400 SLC51AQ86UW1 340 aa15.41■□□□□ 0.06
ACTN4-204ENST00000440400 FOXD4L4Q8WXT5 416 aaPredicted RBP15.41■□□□□ 0.06
ACTN4-204ENST00000440400 FAM217BQ9NTX9 383 aaPredicted RBP15.41■□□□□ 0.06
ACTN4-204ENST00000440400 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.41■□□□□ 0.06
ACTN4-204ENST00000440400 B4E1Z4 1266 aa15.4■□□□□ 0.06
ACTN4-204ENST00000440400 ORC4O43929 436 aa15.4■□□□□ 0.06
ACTN4-204ENST00000440400 SEC23AQ15436 765 aa15.4■□□□□ 0.06
ACTN4-204ENST00000440400 ZNF830Q96NB3 372 aaPredicted RBP15.4■□□□□ 0.06
ACTN4-204ENST00000440400 ATP6V0A2Q9Y487 856 aa15.4■□□□□ 0.06
ACTN4-204ENST00000440400 SRGNP10124 158 aa15.4■□□□□ 0.06
ACTN4-204ENST00000440400 CTDSPL2Q05D32 466 aa15.4■□□□□ 0.06
ACTN4-204ENST00000440400 MIGA1Q8NAN2 632 aa15.4■□□□□ 0.06
ACTN4-204ENST00000440400 FAM163AQ96GL9 167 aaPredicted RBP15.4■□□□□ 0.06
ACTN4-204ENST00000440400 IQSEC3Q9UPP2 1182 aaPredicted RBP15.4■□□□□ 0.06
ACTN4-204ENST00000440400 APBA3O96018 575 aa15.4■□□□□ 0.06
ACTN4-204ENST00000440400 APPP05067 770 aa15.4■□□□□ 0.06
ACTN4-204ENST00000440400 CTR9Q6PD62 1173 aa15.4■□□□□ 0.06
ACTN4-204ENST00000440400 MFSD6Q6ZSS7 791 aa15.4■□□□□ 0.06
ACTN4-204ENST00000440400 MTERF4Q7Z6M4 381 aaKnown RBP15.4■□□□□ 0.06
ACTN4-204ENST00000440400 KRT85P78386 507 aa15.39■□□□□ 0.05
ACTN4-204ENST00000440400 CAVIN1Q6NZI2 390 aaKnown RBP15.39■□□□□ 0.05
ACTN4-204ENST00000440400 ILDR1Q86SU0 546 aaPredicted RBP15.39■□□□□ 0.05
ACTN4-204ENST00000440400 TBC1D16Q8TBP0 767 aa15.39■□□□□ 0.05
ACTN4-204ENST00000440400 NCOA5Q9HCD5 579 aaKnown RBP15.39■□□□□ 0.05
ACTN4-204ENST00000440400 GGA1Q9UJY5 639 aa15.39■□□□□ 0.05
ACTN4-204ENST00000440400 VPS37CA5D8V6 355 aaPredicted RBP15.39■□□□□ 0.05
ACTN4-204ENST00000440400 GOLGA8BA8MQT2 603 aa15.39■□□□□ 0.05
ACTN4-204ENST00000440400 NPR1P16066 1061 aa15.39■□□□□ 0.05
ACTN4-204ENST00000440400 PRDX5P30044 214 aa15.39■□□□□ 0.05
ACTN4-204ENST00000440400 DYNLL1P63167 89 aaKnown RBP15.39■□□□□ 0.05
ACTN4-204ENST00000440400 SCAND2PQ9GZW5 306 aaPredicted RBP15.39■□□□□ 0.05
ACTN4-204ENST00000440400 ABCF2Q9UG63 623 aa15.39■□□□□ 0.05
ACTN4-204ENST00000440400 C10orf71Q711Q0 1435 aa15.39■□□□□ 0.05
ACTN4-204ENST00000440400 TDO2P48775 406 aa15.38■□□□□ 0.05
ACTN4-204ENST00000440400 CD209Q9NNX6 404 aa15.38■□□□□ 0.05
ACTN4-204ENST00000440400 GAKO14976 1311 aa15.38■□□□□ 0.05
ACTN4-204ENST00000440400 PPEF1O14829 653 aaPredicted RBP15.38■□□□□ 0.05
ACTN4-204ENST00000440400 GSTO1P78417 241 aa15.38■□□□□ 0.05
ACTN4-204ENST00000440400 LRSAM1Q6UWE0 723 aa15.38■□□□□ 0.05
ACTN4-204ENST00000440400 TMTC2Q8N394 836 aa15.38■□□□□ 0.05
ACTN4-204ENST00000440400 CAMKK2Q96RR4 588 aa15.38■□□□□ 0.05
ACTN4-204ENST00000440400 ANKIB1Q9P2G1 1089 aa15.38■□□□□ 0.05
ACTN4-204ENST00000440400 ARPP21Q9UBL0 812 aaPredicted RBP15.38■□□□□ 0.05
ACTN4-204ENST00000440400 POLLQ9UGP5 575 aa15.38■□□□□ 0.05
ACTN4-204ENST00000440400 SPDYE4A6NLX3 237 aa15.38■□□□□ 0.05
ACTN4-204ENST00000440400 TTC6Q86TZ1 520 aa15.38■□□□□ 0.05
ACTN4-204ENST00000440400 SENP2Q9HC62 589 aa15.38■□□□□ 0.05
ACTN4-204ENST00000440400 DCP1AQ9NPI6 582 aaPredicted RBP15.38■□□□□ 0.05
ACTN4-204ENST00000440400 SUGT1Q9Y2Z0 365 aa15.38■□□□□ 0.05
ACTN4-204ENST00000440400 GREB1LQ9C091 1923 aaPredicted RBP15.38■□□□□ 0.05
ACTN4-204ENST00000440400 CCT2P78371 535 aaKnown RBP15.37■□□□□ 0.05
ACTN4-204ENST00000440400 MPNDQ8N594 471 aa15.37■□□□□ 0.05
ACTN4-204ENST00000440400 SDR42E1Q8WUS8 393 aa15.37■□□□□ 0.05
ACTN4-204ENST00000440400 SYAP1Q96A49 352 aaPredicted RBP15.37■□□□□ 0.05
ACTN4-204ENST00000440400 CRNKL1Q9BZJ0 848 aaKnown RBP15.37■□□□□ 0.05
ACTN4-204ENST00000440400 NOL7Q9UMY1 257 aaKnown RBP15.37■□□□□ 0.05
ACTN4-204ENST00000440400 PPP2R5BQ15173 497 aa15.37■□□□□ 0.05
ACTN4-204ENST00000440400 MROH7-TTC4A0A0A0MT08 1334 aa15.37■□□□□ 0.05
ACTN4-204ENST00000440400 CDKL5O76039 1030 aa15.36■□□□□ 0.05
ACTN4-204ENST00000440400 PDE6BP35913 854 aa15.36■□□□□ 0.05
ACTN4-204ENST00000440400 RTFDC1Q9BY42 306 aaPredicted RBP15.36■□□□□ 0.05
ACTN4-204ENST00000440400 RBM27Q9P2N5 1060 aaKnown RBP15.36■□□□□ 0.05
ACTN4-204ENST00000440400 KDM4AO75164 1064 aa15.36■□□□□ 0.05
ACTN4-204ENST00000440400 LETM1O95202 739 aaPredicted RBP15.36■□□□□ 0.05
ACTN4-204ENST00000440400 TMEM67Q5HYA8 995 aa15.36■□□□□ 0.05
ACTN4-204ENST00000440400 FAM184AQ8NB25 1140 aa15.36■□□□□ 0.05
ACTN4-204ENST00000440400 IPO4Q8TEX9 1081 aaKnown RBP15.36■□□□□ 0.05
ACTN4-204ENST00000440400 LEO1Q8WVC0 666 aaPredicted RBP15.36■□□□□ 0.05
ACTN4-204ENST00000440400 INCENPQ9NQS7 918 aa15.36■□□□□ 0.05
ACTN4-204ENST00000440400 MYH1P12882 1939 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms