RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 FAM84BQ96KN1 310 aaPredicted RBP9.2□□□□□ -0.94
APP-209ENST00000440126 DNAJC25Q9H1X3 360 aa9.2□□□□□ -0.94
APP-209ENST00000440126 LRRC4BQ9NT99 713 aa9.2□□□□□ -0.94
APP-209ENST00000440126 AATFQ9NY61 560 aaKnown RBP eCLIP9.2□□□□□ -0.94
APP-209ENST00000440126 RTCBQ9Y3I0 505 aaKnown RBP9.2□□□□□ -0.94
APP-209ENST00000440126 GOLGA8AA7E2F4 631 aa9.19□□□□□ -0.94
APP-209ENST00000440126 SH2B2O14492 632 aaPredicted RBP9.19□□□□□ -0.94
APP-209ENST00000440126 CYP2D6P10635 497 aa9.19□□□□□ -0.94
APP-209ENST00000440126 HSPA1LP34931 641 aa9.19□□□□□ -0.94
APP-209ENST00000440126 TYRO3Q06418 890 aa9.19□□□□□ -0.94
APP-209ENST00000440126 NFIXQ14938 502 aa9.19□□□□□ -0.94
APP-209ENST00000440126 APOA5Q6Q788 366 aa9.19□□□□□ -0.94
APP-209ENST00000440126 FUCA2Q9BTY2 467 aa9.19□□□□□ -0.94
APP-209ENST00000440126 SLC26A6Q9BXS9 759 aa9.19□□□□□ -0.94
APP-209ENST00000440126 UTRNP46939 3433 aa9.19□□□□□ -0.94
APP-209ENST00000440126 RANBP6O60518 1105 aaKnown RBP9.19□□□□□ -0.94
APP-209ENST00000440126 NMT2O60551 498 aa9.19□□□□□ -0.94
APP-209ENST00000440126 RFC4P35249 363 aa9.19□□□□□ -0.94
APP-209ENST00000440126 RPS8P62241 208 aaKnown RBP9.19□□□□□ -0.94
APP-209ENST00000440126 HMGN5P82970 282 aaKnown RBP9.19□□□□□ -0.94
APP-209ENST00000440126 FSIP1Q8NA03 581 aa9.19□□□□□ -0.94
APP-209ENST00000440126 PDLIM2Q96JY6 352 aa9.19□□□□□ -0.94
APP-209ENST00000440126 NLRP3Q96P20 1036 aa9.19□□□□□ -0.94
APP-209ENST00000440126 ALG1Q9BT22 464 aa9.19□□□□□ -0.94
APP-209ENST00000440126 KCNJ14Q9UNX9 436 aa9.19□□□□□ -0.94
APP-209ENST00000440126 MRVI1Q9Y6F6 885 aa9.19□□□□□ -0.94
APP-209ENST00000440126 AFF2P51816 1311 aa9.19□□□□□ -0.94
APP-209ENST00000440126 ZBTB43O43298 467 aa9.18□□□□□ -0.94
APP-209ENST00000440126 GRIK5Q16478 980 aa9.18□□□□□ -0.94
APP-209ENST00000440126 SPECC1Q5M775 1068 aa9.18□□□□□ -0.94
APP-209ENST00000440126 MFSD6Q6ZSS7 791 aa9.18□□□□□ -0.94
APP-209ENST00000440126 IGDCC4Q8TDY8 1250 aa9.18□□□□□ -0.94
APP-209ENST00000440126 LLPHQ9BRT6 129 aaKnown RBP9.18□□□□□ -0.94
APP-209ENST00000440126 LY9Q9HBG7 655 aa9.18□□□□□ -0.94
APP-209ENST00000440126 MAGEB6P1A0A0J9YX57 407 aa9.18□□□□□ -0.94
APP-209ENST00000440126 BIN1O00499 593 aa9.18□□□□□ -0.94
APP-209ENST00000440126 SF3A1Q15459 793 aaKnown RBP9.18□□□□□ -0.94
APP-209ENST00000440126 SEPT12Q8IYM1 358 aa9.18□□□□□ -0.94
APP-209ENST00000440126 ANKIB1Q9P2G1 1089 aa9.18□□□□□ -0.94
APP-209ENST00000440126 NARFQ9UHQ1 456 aa9.18□□□□□ -0.94
APP-209ENST00000440126 RPS6KA4O75676 772 aa9.18□□□□□ -0.94
APP-209ENST00000440126 GNL2Q13823 731 aaKnown RBP9.18□□□□□ -0.94
APP-209ENST00000440126 STK38Q15208 465 aa9.18□□□□□ -0.94
APP-209ENST00000440126 CAVIN4Q5BKX8 364 aa9.18□□□□□ -0.94
APP-209ENST00000440126 FAM47AQ5JRC9 791 aa9.18□□□□□ -0.94
APP-209ENST00000440126 AKNAD1Q5T1N1 836 aa9.18□□□□□ -0.94
APP-209ENST00000440126 NAA16Q6N069 864 aaPredicted RBP9.18□□□□□ -0.94
APP-209ENST00000440126 ZNF512BQ96KM6 892 aaPredicted RBP9.18□□□□□ -0.94
APP-209ENST00000440126 FAM217BQ9NTX9 383 aaPredicted RBP9.18□□□□□ -0.94
APP-209ENST00000440126 PCDHA7Q9UN72 937 aa9.18□□□□□ -0.94
APP-209ENST00000440126 SLC12A7Q9Y666 1083 aa9.18□□□□□ -0.94
APP-209ENST00000440126 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.18□□□□□ -0.94
APP-209ENST00000440126 MYH2Q9UKX2 1941 aa9.17□□□□□ -0.94
APP-209ENST00000440126 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.17□□□□□ -0.94
APP-209ENST00000440126 LOC102724159A0A0B4J2E5 919 aa9.17□□□□□ -0.94
APP-209ENST00000440126 CCDC69A6NI79 296 aa9.17□□□□□ -0.94
APP-209ENST00000440126 ZNF500O60304 480 aaPredicted RBP9.17□□□□□ -0.94
APP-209ENST00000440126 TRIM37O94972 964 aa9.17□□□□□ -0.94
APP-209ENST00000440126 CCDC192P0DO97 292 aa9.17□□□□□ -0.94
APP-209ENST00000440126 PPARAQ07869 468 aa9.17□□□□□ -0.94
APP-209ENST00000440126 PWP2Q15269 919 aaKnown RBP9.17□□□□□ -0.94
APP-209ENST00000440126 C11orf57Q6ZUT1 292 aaPredicted RBP9.17□□□□□ -0.94
APP-209ENST00000440126 FBXO18Q8NFZ0 1043 aa9.17□□□□□ -0.94
APP-209ENST00000440126 AK7Q96M32 723 aa9.17□□□□□ -0.94
APP-209ENST00000440126 ZSCAN16Q9H4T2 348 aaPredicted RBP9.17□□□□□ -0.94
APP-209ENST00000440126 BTAF1O14981 1849 aa9.17□□□□□ -0.94
APP-209ENST00000440126 MYH13Q9UKX3 1938 aa9.17□□□□□ -0.94
APP-209ENST00000440126 SF3B3Q15393 1217 aaKnown RBP9.17□□□□□ -0.94
APP-209ENST00000440126 DIXDC1Q155Q3 683 aa9.17□□□□□ -0.94
APP-209ENST00000440126 KRT40Q6A162 431 aa9.17□□□□□ -0.94
APP-209ENST00000440126 SASS6Q6UVJ0 657 aa9.17□□□□□ -0.94
APP-209ENST00000440126 OLFM4Q6UX06 510 aa9.17□□□□□ -0.94
APP-209ENST00000440126 CLEC4GQ6UXB4 293 aa9.17□□□□□ -0.94
APP-209ENST00000440126 GJD4Q96KN9 370 aaPredicted RBP9.17□□□□□ -0.94
APP-209ENST00000440126 CLIC6Q96NY7 704 aa9.17□□□□□ -0.94
APP-209ENST00000440126 TRIM34Q9BYJ4 488 aa9.17□□□□□ -0.94
APP-209ENST00000440126 CLSTN2Q9H4D0 955 aa9.17□□□□□ -0.94
APP-209ENST00000440126 CBX8Q9HC52 389 aa9.17□□□□□ -0.94
APP-209ENST00000440126 BSDC1Q9NW68 430 aaPredicted RBP9.17□□□□□ -0.94
APP-209ENST00000440126 CFAP45Q9UL16 551 aa9.17□□□□□ -0.94
APP-209ENST00000440126 LRP5O75197 1615 aa9.16□□□□□ -0.94
APP-209ENST00000440126 ELP1O95163 1332 aa9.16□□□□□ -0.94
APP-209ENST00000440126 USP17L12C9JPN9 530 aa9.16□□□□□ -0.94
APP-209ENST00000440126 USP17L21D6R901 530 aa9.16□□□□□ -0.94
APP-209ENST00000440126 MECOMQ03112 1051 aa9.16□□□□□ -0.94
APP-209ENST00000440126 AXDND1Q5T1B0 1012 aaPredicted RBP9.16□□□□□ -0.94
APP-209ENST00000440126 TPTE2Q6XPS3 522 aa9.16□□□□□ -0.94
APP-209ENST00000440126 TICAM2Q86XR7 235 aa9.16□□□□□ -0.94
APP-209ENST00000440126 FNBP4Q8N3X1 1017 aaPredicted RBP9.16□□□□□ -0.94
APP-209ENST00000440126 ZNF622Q969S3 477 aaKnown RBP eCLIP9.16□□□□□ -0.94
APP-209ENST00000440126 CICQ96RK0 1608 aaPredicted RBP9.16□□□□□ -0.94
APP-209ENST00000440126 ZMYM6O95789 1325 aa9.16□□□□□ -0.94
APP-209ENST00000440126 IARSP41252 1262 aaKnown RBP9.16□□□□□ -0.94
APP-209ENST00000440126 NDUFA8P51970 172 aa9.16□□□□□ -0.94
APP-209ENST00000440126 KIF23Q02241 960 aaPredicted RBP9.16□□□□□ -0.94
APP-209ENST00000440126 TRAPPC3LQ5T215 181 aa9.16□□□□□ -0.94
APP-209ENST00000440126 MYSM1Q5VVJ2 828 aa9.16□□□□□ -0.94
APP-209ENST00000440126 TRERF1Q96PN7 1200 aa9.16□□□□□ -0.94
APP-209ENST00000440126 NACAP1Q9BZK3 213 aa9.16□□□□□ -0.94
APP-209ENST00000440126 COL5A3P25940 1745 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms