RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 FAM198AQ9UFP1 575 aa17.4■□□□□ 0.38
TNFRSF1A-204ENST00000440083 WDHD1O75717 1129 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1A-204ENST00000440083 ANAPC15P60006 121 aa17.39■□□□□ 0.37
TNFRSF1A-204ENST00000440083 PRKG1Q13976 671 aa17.39■□□□□ 0.37
TNFRSF1A-204ENST00000440083 SLC9C2Q5TAH2 1124 aa17.39■□□□□ 0.37
TNFRSF1A-204ENST00000440083 TEPSINQ96N21 525 aa17.39■□□□□ 0.37
TNFRSF1A-204ENST00000440083 DDX4Q9NQI0 724 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1A-204ENST00000440083 ABT1Q9ULW3 272 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1A-204ENST00000440083 TCRBV5S4A2TA0A5A2 114 aa17.38■□□□□ 0.37
TNFRSF1A-204ENST00000440083 NMIQ13287 307 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1A-204ENST00000440083 PICALMQ13492 652 aa17.38■□□□□ 0.37
TNFRSF1A-204ENST00000440083 TNFAIP1Q13829 316 aa17.38■□□□□ 0.37
TNFRSF1A-204ENST00000440083 GBA2Q9HCG7 927 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1A-204ENST00000440083 ZNF532Q9HCE3 1301 aa17.38■□□□□ 0.37
TNFRSF1A-204ENST00000440083 K7ELQ4 463 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1A-204ENST00000440083 FKBP1CQ5VVH2 108 aa17.37■□□□□ 0.37
TNFRSF1A-204ENST00000440083 TEX11Q8IYF3 940 aa17.37■□□□□ 0.37
TNFRSF1A-204ENST00000440083 MKRN1Q9UHC7 482 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-204ENST00000440083 PPP2R3BQ9Y5P8 575 aa17.37■□□□□ 0.37
TNFRSF1A-204ENST00000440083 PAPPA2Q9BXP8 1791 aa17.37■□□□□ 0.37
TNFRSF1A-204ENST00000440083 CDK5RAP2Q96SN8 1893 aa17.37■□□□□ 0.37
TNFRSF1A-204ENST00000440083 HSP90AA1P07900 732 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-204ENST00000440083 ADD2P35612 726 aa17.36■□□□□ 0.37
TNFRSF1A-204ENST00000440083 TNNI2P48788 182 aa17.36■□□□□ 0.37
TNFRSF1A-204ENST00000440083 LRRFIP1Q32MZ4 808 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-204ENST00000440083 FAM83AQ86UY5 434 aa17.36■□□□□ 0.37
TNFRSF1A-204ENST00000440083 KBTBD3Q8NAB2 608 aa17.36■□□□□ 0.37
TNFRSF1A-204ENST00000440083 NOL10Q9BSC4 688 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-204ENST00000440083 LSG1Q9H089 658 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-204ENST00000440083 IL25Q9H293 177 aa17.36■□□□□ 0.37
TNFRSF1A-204ENST00000440083 SLKQ9H2G2 1235 aaPredicted RBP17.36■□□□□ 0.37
TNFRSF1A-204ENST00000440083 TLL2Q9Y6L7 1015 aa17.36■□□□□ 0.37
TNFRSF1A-204ENST00000440083 UBE2Q2LH0YL09 131 aa17.35■□□□□ 0.37
TNFRSF1A-204ENST00000440083 HSPA4P34932 840 aa17.35■□□□□ 0.37
TNFRSF1A-204ENST00000440083 PPP4CP60510 307 aa17.35■□□□□ 0.37
TNFRSF1A-204ENST00000440083 TTLL12Q14166 644 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF1A-204ENST00000440083 SH3BP5LQ7L8J4 393 aa17.35■□□□□ 0.37
TNFRSF1A-204ENST00000440083 SAPCD2Q86UD0 394 aa17.35■□□□□ 0.37
TNFRSF1A-204ENST00000440083 TICAM2Q86XR7 235 aa17.35■□□□□ 0.37
TNFRSF1A-204ENST00000440083 FAM151AQ8WW52 585 aa17.35■□□□□ 0.37
TNFRSF1A-204ENST00000440083 IDI2Q9BXS1 227 aa17.35■□□□□ 0.37
TNFRSF1A-204ENST00000440083 CEP350Q5VT06 3117 aa17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 BAG3O95817 575 aa17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 SLURP2P0DP57 97 aa17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 HUNKP57058 714 aa17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 CCDC171Q6TFL3 1326 aa17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 MAPKAPK5Q8IW41 473 aa17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 LCORLQ8N3X6 602 aa17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 C2orf69Q8N8R5 385 aa17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 IL27Q8NEV9 243 aa17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 TGFBRAP1Q8WUH2 860 aa17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 FAM227BQ96M60 508 aa17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 RIOK1Q9BRS2 568 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 RPAP1Q9BWH6 1393 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.34■□□□□ 0.37
TNFRSF1A-204ENST00000440083 FOCADQ5VW36 1801 aa17.33■□□□□ 0.37
TNFRSF1A-204ENST00000440083 A0A0D9SFI3 127 aa17.33■□□□□ 0.36
TNFRSF1A-204ENST00000440083 MAGEB6P1A0A0J9YX57 407 aa17.33■□□□□ 0.36
TNFRSF1A-204ENST00000440083 IGSF3O75054 1194 aa17.33■□□□□ 0.36
TNFRSF1A-204ENST00000440083 NF2P35240 595 aa17.33■□□□□ 0.36
TNFRSF1A-204ENST00000440083 SUPT20HL1Q3ZLR7 823 aa17.33■□□□□ 0.36
TNFRSF1A-204ENST00000440083 PAXIP1Q6ZW49 1069 aaPredicted RBP17.33■□□□□ 0.36
TNFRSF1A-204ENST00000440083 SPRYD3Q8NCJ5 442 aa17.33■□□□□ 0.36
TNFRSF1A-204ENST00000440083 ARMT1Q9H993 441 aa17.33■□□□□ 0.36
TNFRSF1A-204ENST00000440083 ANGEL1Q9UNK9 670 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1A-204ENST00000440083 OTOFQ9HC10 1997 aa17.33■□□□□ 0.36
TNFRSF1A-204ENST00000440083 DDTLA6NHG4 134 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-204ENST00000440083 RASSF10A6NK89 507 aa17.32■□□□□ 0.36
TNFRSF1A-204ENST00000440083 ENTPD3O75355 529 aa17.32■□□□□ 0.36
TNFRSF1A-204ENST00000440083 MBD4O95243 580 aa17.32■□□□□ 0.36
TNFRSF1A-204ENST00000440083 PLCG2P16885 1265 aa17.32■□□□□ 0.36
TNFRSF1A-204ENST00000440083 MCM2P49736 904 aa17.32■□□□□ 0.36
TNFRSF1A-204ENST00000440083 GRM1Q13255 1194 aa17.32■□□□□ 0.36
TNFRSF1A-204ENST00000440083 DNAJC5GQ8N7S2 189 aa17.32■□□□□ 0.36
TNFRSF1A-204ENST00000440083 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-204ENST00000440083 SAP30BPQ9UHR5 308 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-204ENST00000440083 PALD1Q9ULE6 856 aa17.32■□□□□ 0.36
TNFRSF1A-204ENST00000440083 FLT1P17948 1338 aa17.31■□□□□ 0.36
TNFRSF1A-204ENST00000440083 RNF113AO15541 343 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1A-204ENST00000440083 UBE3CQ15386 1083 aa17.31■□□□□ 0.36
TNFRSF1A-204ENST00000440083 SLC4A8Q2Y0W8 1093 aa17.31■□□□□ 0.36
TNFRSF1A-204ENST00000440083 CYP4F22Q6NT55 531 aa17.31■□□□□ 0.36
TNFRSF1A-204ENST00000440083 MIGA2Q7L4E1 593 aa17.31■□□□□ 0.36
TNFRSF1A-204ENST00000440083 ZSCAN29Q8IWY8 852 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-204ENST00000440083 IL17RAQ96F46 866 aa17.31■□□□□ 0.36
TNFRSF1A-204ENST00000440083 PUS7LQ9H0K6 701 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1A-204ENST00000440083 OSBPL5Q9H0X9 879 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-204ENST00000440083 ATRNL1Q5VV63 1379 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 M0R2C6 588 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 PRKAB2O43741 272 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 USP2O75604 605 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 CD2BP2O95400 341 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 VEGFBP49765 207 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 NEK4P51957 841 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 FKBP1BP68106 108 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 NBR1Q14596 966 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 MCMDC2Q4G0Z9 681 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 IFFO2Q5TF58 517 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 ZSCAN25Q6NSZ9 544 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 OSBP2Q969R2 916 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms