RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 POLR2DO15514 142 aaKnown RBP16.43■□□□□ 0.22
PCNX1-202ENST00000439984 ADAM21Q9UKJ8 722 aa16.43■□□□□ 0.22
PCNX1-202ENST00000439984 KRT71Q3SY84 523 aa16.43■□□□□ 0.22
PCNX1-202ENST00000439984 MTMR6Q9Y217 621 aa16.43■□□□□ 0.22
PCNX1-202ENST00000439984 PSDA5PKW4 1024 aaPredicted RBP16.43■□□□□ 0.22
PCNX1-202ENST00000439984 GIGYF1O75420 1035 aaPredicted RBP16.43■□□□□ 0.22
PCNX1-202ENST00000439984 ALDH3A1P30838 453 aa16.43■□□□□ 0.22
PCNX1-202ENST00000439984 NPC1L1Q9UHC9 1359 aa16.43■□□□□ 0.22
PCNX1-202ENST00000439984 MPRIPQ6WCQ1 1025 aa16.43■□□□□ 0.22
PCNX1-202ENST00000439984 GJC1P36383 396 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 RTN1Q16799 776 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 ATL3Q6DD88 541 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 TADA2BQ86TJ2 420 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 PPFIA4O75335 1185 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 CIB2O75838 187 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 ATP5J2-PTCD1G3V325 749 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 PTCD1O75127 700 aaKnown RBP16.42■□□□□ 0.22
PCNX1-202ENST00000439984 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.42■□□□□ 0.22
PCNX1-202ENST00000439984 MORC2Q9Y6X9 1032 aaPredicted RBP16.42■□□□□ 0.22
PCNX1-202ENST00000439984 KIF3CO14782 793 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 WTAPQ15007 396 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 SRGAP1Q7Z6B7 1085 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 STAG1Q8WVM7 1258 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
PCNX1-202ENST00000439984 USP19O94966 1318 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 MAGI2Q86UL8 1455 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 TBC1D8BQ0IIM8 1120 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 GSTA5Q7RTV2 222 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 CCDC26Q8TAB7 109 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 TCP11Q8WWU5 503 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 MCUR1Q96AQ8 359 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 PHACTR3Q96KR7 559 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 MAP3K12Q12852 859 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 LMBR1Q8WVP7 490 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 VAT1LQ9HCJ6 419 aa16.42■□□□□ 0.22
PCNX1-202ENST00000439984 LRRD1A4D1F6 860 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 PFDN1O60925 122 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 HIP1RO75146 1068 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 SPATS2Q86XZ4 545 aaKnown RBP16.41■□□□□ 0.22
PCNX1-202ENST00000439984 LRRC45Q96CN5 670 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 NCKAP5LQ9HCH0 1330 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 TATP17735 454 aaPredicted RBP16.41■□□□□ 0.22
PCNX1-202ENST00000439984 BEND3Q5T5X7 828 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 TMCO4Q5TGY1 634 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 GKAP1Q5VSY0 366 aaPredicted RBP16.41■□□□□ 0.22
PCNX1-202ENST00000439984 SGSM2O43147 1006 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 C11orf57Q6ZUT1 292 aaPredicted RBP16.41■□□□□ 0.22
PCNX1-202ENST00000439984 ZNF365Q70YC5 407 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 UBE3BQ7Z3V4 1068 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 ANKLE2Q86XL3 938 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 CCDC63Q8NA47 563 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 TDRD7Q8NHU6 1098 aaKnown RBP16.41■□□□□ 0.22
PCNX1-202ENST00000439984 MKNK2Q9HBH9 465 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 MRFAP1Q9Y605 127 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 TTC41PQ6P2S7 1318 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 FAM227BQ96M60 508 aa16.41■□□□□ 0.22
PCNX1-202ENST00000439984 CNPY4Q8N129 248 aa16.4■□□□□ 0.22
PCNX1-202ENST00000439984 CEP120Q8N960 986 aa16.4■□□□□ 0.22
PCNX1-202ENST00000439984 RNF41Q9H4P4 317 aaPredicted RBP16.4■□□□□ 0.22
PCNX1-202ENST00000439984 WWC2Q6AWC2 1192 aa16.4■□□□□ 0.22
PCNX1-202ENST00000439984 KIAA1468Q9P260 1216 aa16.4■□□□□ 0.22
PCNX1-202ENST00000439984 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
PCNX1-202ENST00000439984 KSR1Q8IVT5 923 aa16.4■□□□□ 0.22
PCNX1-202ENST00000439984 RPUSD2Q8IZ73 545 aaKnown RBP16.4■□□□□ 0.22
PCNX1-202ENST00000439984 NOC4LQ9BVI4 516 aaKnown RBP16.4■□□□□ 0.22
PCNX1-202ENST00000439984 STRN4Q9NRL3 753 aa16.4■□□□□ 0.22
PCNX1-202ENST00000439984 PPIP5K1Q6PFW1 1433 aa16.4■□□□□ 0.22
PCNX1-202ENST00000439984 MCM7P33993 719 aa16.4■□□□□ 0.22
PCNX1-202ENST00000439984 CTNNA1P35221 906 aaKnown RBP16.4■□□□□ 0.22
PCNX1-202ENST00000439984 RFC1P35251 1148 aaPredicted RBP16.4■□□□□ 0.22
PCNX1-202ENST00000439984 CHPF2Q9P2E5 772 aa16.4■□□□□ 0.22
PCNX1-202ENST00000439984 UTP11Q9Y3A2 253 aaKnown RBP16.39■□□□□ 0.22
PCNX1-202ENST00000439984 ERCC3P19447 782 aa16.39■□□□□ 0.21
PCNX1-202ENST00000439984 RASIP1Q5U651 963 aa16.39■□□□□ 0.21
PCNX1-202ENST00000439984 TRMT1LQ7Z2T5 733 aaKnown RBP16.39■□□□□ 0.21
PCNX1-202ENST00000439984 VWA3AA6NCI4 1184 aa16.39■□□□□ 0.21
PCNX1-202ENST00000439984 NOL3O60936 208 aaKnown RBP16.39■□□□□ 0.21
PCNX1-202ENST00000439984 TRIM14Q14142 442 aa16.39■□□□□ 0.21
PCNX1-202ENST00000439984 CABP5Q9NP86 173 aa16.39■□□□□ 0.21
PCNX1-202ENST00000439984 SUFUQ9UMX1 484 aa16.39■□□□□ 0.21
PCNX1-202ENST00000439984 TTC37Q6PGP7 1564 aa16.39■□□□□ 0.21
PCNX1-202ENST00000439984 CDC25BP30305 580 aa16.39■□□□□ 0.21
PCNX1-202ENST00000439984 SOS1Q07889 1333 aaPredicted RBP16.39■□□□□ 0.21
PCNX1-202ENST00000439984 ANKRD42Q8N9B4 389 aa16.39■□□□□ 0.21
PCNX1-202ENST00000439984 ENC1O14682 589 aa16.39■□□□□ 0.21
PCNX1-202ENST00000439984 CALCOCO2Q13137 446 aa16.39■□□□□ 0.21
PCNX1-202ENST00000439984 CEP104O60308 925 aa16.38■□□□□ 0.21
PCNX1-202ENST00000439984 TTF1Q15361 905 aaPredicted RBP16.38■□□□□ 0.21
PCNX1-202ENST00000439984 TEX11Q8IYF3 940 aa16.38■□□□□ 0.21
PCNX1-202ENST00000439984 PAF1Q8N7H5 531 aa16.38■□□□□ 0.21
PCNX1-202ENST00000439984 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
PCNX1-202ENST00000439984 TBC1D5Q92609 795 aa16.38■□□□□ 0.21
PCNX1-202ENST00000439984 EPC1Q9H2F5 836 aa16.38■□□□□ 0.21
PCNX1-202ENST00000439984 SUDS3Q9H7L9 328 aaPredicted RBP16.38■□□□□ 0.21
PCNX1-202ENST00000439984 WWC3Q9ULE0 1092 aa16.38■□□□□ 0.21
PCNX1-202ENST00000439984 POLE2P56282 527 aa16.38■□□□□ 0.21
PCNX1-202ENST00000439984 DDX27Q96GQ7 796 aaKnown RBP16.38■□□□□ 0.21
PCNX1-202ENST00000439984 PDLIM2Q96JY6 352 aa16.38■□□□□ 0.21
PCNX1-202ENST00000439984 FAM170AA1A519 330 aa16.38■□□□□ 0.21
PCNX1-202ENST00000439984 SLC35F6Q8N357 371 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms