RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 CYP2D6P10635 497 aa8.93□□□□□ -0.98
UBR3-205ENST00000439681 LMOD1P29536 600 aaPredicted RBP8.93□□□□□ -0.98
UBR3-205ENST00000439681 SBK1Q52WX2 424 aa8.93□□□□□ -0.98
UBR3-205ENST00000439681 FKBP1CQ5VVH2 108 aa8.93□□□□□ -0.98
UBR3-205ENST00000439681 NBPF3Q9H094 633 aa8.93□□□□□ -0.98
UBR3-205ENST00000439681 NAPBQ9H115 298 aa8.93□□□□□ -0.98
UBR3-205ENST00000439681 HACL1Q9UJ83 578 aa8.93□□□□□ -0.98
UBR3-205ENST00000439681 TACC3Q9Y6A5 838 aa8.93□□□□□ -0.98
UBR3-205ENST00000439681 MAST2Q6P0Q8 1798 aa8.93□□□□□ -0.98
UBR3-205ENST00000439681 MYH13Q9UKX3 1938 aa8.93□□□□□ -0.98
UBR3-205ENST00000439681 DICER1Q9UPY3 1922 aaKnown RBP8.93□□□□□ -0.98
UBR3-205ENST00000439681 TDO2P48775 406 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 PICALMQ13492 652 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 TSGA10IPQ3SY00 556 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 SH3BP5LQ7L8J4 393 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 IL17RAQ96F46 866 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 KIF2CQ99661 725 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 OSBPL5Q9H0X9 879 aaPredicted RBP8.92□□□□□ -0.98
UBR3-205ENST00000439681 TAF1DQ9H5J8 278 aaPredicted RBP8.92□□□□□ -0.98
UBR3-205ENST00000439681 UPF2Q9HAU5 1272 aaKnown RBP8.92□□□□□ -0.98
UBR3-205ENST00000439681 MCM9Q9NXL9 1143 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 PGAP2Q9UHJ9 254 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 SAP30BPQ9UHR5 308 aaKnown RBP8.92□□□□□ -0.98
UBR3-205ENST00000439681 CCDC88AQ3V6T2 1871 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 TCP10L2B9ZVM9 353 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 ENTPD3O75355 529 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 EPHX2P34913 555 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 PLCD1P51178 756 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 HAND2P61296 217 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 TCP10Q12799 353 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 C12orf60Q5U649 245 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 ANAPC4Q9UJX5 808 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 SNX14Q9Y5W7 946 aa8.92□□□□□ -0.98
UBR3-205ENST00000439681 CNTNAP1P78357 1384 aa8.91□□□□□ -0.98
UBR3-205ENST00000439681 MINDY4BA8MYZ0 360 aa8.91□□□□□ -0.98
UBR3-205ENST00000439681 ZNF213O14771 459 aa8.91□□□□□ -0.98
UBR3-205ENST00000439681 MYO1BO43795 1136 aa8.91□□□□□ -0.98
UBR3-205ENST00000439681 PPARAQ07869 468 aa8.91□□□□□ -0.98
UBR3-205ENST00000439681 STOX1Q6ZVD7 989 aa8.91□□□□□ -0.98
UBR3-205ENST00000439681 USP50Q70EL3 339 aaPredicted RBP8.91□□□□□ -0.98
UBR3-205ENST00000439681 FAM151AQ8WW52 585 aa8.91□□□□□ -0.98
UBR3-205ENST00000439681 VEZTQ9HBM0 779 aa8.91□□□□□ -0.98
UBR3-205ENST00000439681 INCENPQ9NQS7 918 aa8.91□□□□□ -0.98
UBR3-205ENST00000439681 SCAF8Q9UPN6 1271 aaKnown RBP8.91□□□□□ -0.98
UBR3-205ENST00000439681 ADAMTSL1Q8N6G6 1762 aa8.91□□□□□ -0.98
UBR3-205ENST00000439681 TIAM2Q8IVF5 1701 aa8.91□□□□□ -0.98
UBR3-205ENST00000439681 IQCA1LA6NCM1 817 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 DDTLA6NHG4 134 aaPredicted RBP8.9□□□□□ -0.98
UBR3-205ENST00000439681 MCCP23508 829 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 CTDSPL2Q05D32 466 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 COL9A3Q14050 684 aaPredicted RBP8.9□□□□□ -0.98
UBR3-205ENST00000439681 IMMTQ16891 758 aaKnown RBP8.9□□□□□ -0.98
UBR3-205ENST00000439681 ADCK5Q3MIX3 580 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 ANGEL2Q5VTE6 544 aaKnown RBP8.9□□□□□ -0.98
UBR3-205ENST00000439681 FAM83AQ86UY5 434 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 TBC1D10CQ8IV04 446 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 NKX2-3Q8TAU0 364 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 DDRGK1Q96HY6 314 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 RRAGCQ9HB90 399 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 TSHZ2Q9NRE2 1034 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 TMOD2Q9NZR1 351 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 ARPP21Q9UBL0 812 aaPredicted RBP8.9□□□□□ -0.98
UBR3-205ENST00000439681 AK9Q5TCS8 1911 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 E7EWF7 191 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 POLR3DP05423 398 aaPredicted RBP8.9□□□□□ -0.98
UBR3-205ENST00000439681 FGRP09769 529 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 ANAPC15P60006 121 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 RASA3Q14644 834 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 SLC4A8Q2Y0W8 1093 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 RNF20Q5VTR2 975 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 CDAN1Q8IWY9 1227 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 TMEM39BQ9GZU3 492 aa8.9□□□□□ -0.98
UBR3-205ENST00000439681 MYH7P12883 1935 aa8.9□□□□□ -0.99
UBR3-205ENST00000439681 MYH2Q9UKX2 1941 aa8.9□□□□□ -0.99
UBR3-205ENST00000439681 SLURP2P0DP57 97 aa8.89□□□□□ -0.99
UBR3-205ENST00000439681 VEGFAP15692 232 aaPredicted RBP8.89□□□□□ -0.99
UBR3-205ENST00000439681 ZKSCAN1P17029 563 aaPredicted RBP8.89□□□□□ -0.99
UBR3-205ENST00000439681 GABPAQ06546 454 aa8.89□□□□□ -0.99
UBR3-205ENST00000439681 ZC3H15Q8WU90 426 aaKnown RBP8.89□□□□□ -0.99
UBR3-205ENST00000439681 DYNLL2Q96FJ2 89 aa8.89□□□□□ -0.99
UBR3-205ENST00000439681 TEPSINQ96N21 525 aa8.89□□□□□ -0.99
UBR3-205ENST00000439681 DEFB129Q9H1M3 183 aa8.89□□□□□ -0.99
UBR3-205ENST00000439681 DHX36Q9H2U1 1008 aaKnown RBP8.89□□□□□ -0.99
UBR3-205ENST00000439681 GGA3Q9NZ52 723 aa8.89□□□□□ -0.99
UBR3-205ENST00000439681 ATRNL1Q5VV63 1379 aa8.89□□□□□ -0.99
UBR3-205ENST00000439681 AKNAD1Q5T1N1 836 aa8.89□□□□□ -0.99
UBR3-205ENST00000439681 TTC6Q86TZ1 520 aa8.89□□□□□ -0.99
UBR3-205ENST00000439681 PNMA8AQ86V59 439 aaPredicted RBP8.89□□□□□ -0.99
UBR3-205ENST00000439681 METTL16Q86W50 562 aaKnown RBP8.89□□□□□ -0.99
UBR3-205ENST00000439681 STK11IPQ8N1F8 1099 aa8.89□□□□□ -0.99
UBR3-205ENST00000439681 STAG1Q8WVM7 1258 aa8.89□□□□□ -0.99
UBR3-205ENST00000439681 NMRK2Q9NPI5 230 aa8.89□□□□□ -0.99
UBR3-205ENST00000439681 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBR3-205ENST00000439681 PITPNM2Q9BZ72 1349 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 POTEIP0CG38 1075 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 POTEJP0CG39 1038 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 DLK2Q6UY11 383 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 C16orf86Q6ZW13 317 aa8.88□□□□□ -0.99
UBR3-205ENST00000439681 APOBEC3FQ8IUX4 373 aaKnown RBP8.88□□□□□ -0.99
UBR3-205ENST00000439681 TM6SF1Q9BZW5 370 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms