RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 PNPLA7Q6ZV29 1317 aa14.05□□□□□ -0.16
HDAC8-214ENST00000439122 SPATA31A7Q8IWB4 1347 aa14.05□□□□□ -0.16
HDAC8-214ENST00000439122 WDHD1O75717 1129 aaPredicted RBP14.05□□□□□ -0.16
HDAC8-214ENST00000439122 SLC3A2P08195 630 aaKnown RBP14.05□□□□□ -0.16
HDAC8-214ENST00000439122 PFKFB1P16118 471 aa14.05□□□□□ -0.16
HDAC8-214ENST00000439122 CYP7A1P22680 504 aa14.05□□□□□ -0.16
HDAC8-214ENST00000439122 CMA1P23946 247 aa14.05□□□□□ -0.16
HDAC8-214ENST00000439122 CDC25BP30305 580 aa14.05□□□□□ -0.16
HDAC8-214ENST00000439122 MYRIPQ8NFW9 859 aa14.05□□□□□ -0.16
HDAC8-214ENST00000439122 ERICH2A1L162 156 aa14.04□□□□□ -0.16
HDAC8-214ENST00000439122 GYG1P46976 350 aa14.04□□□□□ -0.16
HDAC8-214ENST00000439122 DPCR1Q3MIW9 517 aa14.04□□□□□ -0.16
HDAC8-214ENST00000439122 CCDC144BQ3MJ40 725 aa14.04□□□□□ -0.16
HDAC8-214ENST00000439122 ERFEQ4G0M1 354 aa14.04□□□□□ -0.16
HDAC8-214ENST00000439122 STAG1Q8WVM7 1258 aa14.04□□□□□ -0.16
HDAC8-214ENST00000439122 SMARCC1Q92922 1105 aaPredicted RBP14.04□□□□□ -0.16
HDAC8-214ENST00000439122 MRFAP1L1Q96HT8 127 aa14.04□□□□□ -0.16
HDAC8-214ENST00000439122 BIN1O00499 593 aa14.04□□□□□ -0.16
HDAC8-214ENST00000439122 WTAPQ15007 396 aa14.04□□□□□ -0.16
HDAC8-214ENST00000439122 ANKRD18AQ8IVF6 992 aa14.04□□□□□ -0.16
HDAC8-214ENST00000439122 JMYQ8N9B5 988 aa14.04□□□□□ -0.16
HDAC8-214ENST00000439122 RAI14Q9P0K7 980 aa14.04□□□□□ -0.16
HDAC8-214ENST00000439122 MROH7-TTC4A0A0A0MT08 1334 aa14.04□□□□□ -0.16
HDAC8-214ENST00000439122 MINDY4BA8MYZ0 360 aa14.03□□□□□ -0.16
HDAC8-214ENST00000439122 CHAF1AQ13111 956 aaPredicted RBP14.03□□□□□ -0.16
HDAC8-214ENST00000439122 ADGRA1Q86SQ6 560 aa14.03□□□□□ -0.16
HDAC8-214ENST00000439122 CCDC82Q8N4S0 544 aa14.03□□□□□ -0.16
HDAC8-214ENST00000439122 CACTINQ8WUQ7 758 aaKnown RBP14.03□□□□□ -0.16
HDAC8-214ENST00000439122 SDR42E1Q8WUS8 393 aa14.03□□□□□ -0.16
HDAC8-214ENST00000439122 GNL3LQ9NVN8 582 aaKnown RBP14.03□□□□□ -0.16
HDAC8-214ENST00000439122 NRAPQ86VF7 1730 aa14.03□□□□□ -0.16
HDAC8-214ENST00000439122 WTIPA6NIX2 430 aaPredicted RBP14.03□□□□□ -0.16
HDAC8-214ENST00000439122 FMNL1O95466 1100 aaPredicted RBP14.03□□□□□ -0.16
HDAC8-214ENST00000439122 U2AF2P26368 475 aaKnown RBP eCLIP14.03□□□□□ -0.16
HDAC8-214ENST00000439122 SYKP43405 635 aa14.03□□□□□ -0.16
HDAC8-214ENST00000439122 KCNQ4P56696 695 aa14.03□□□□□ -0.16
HDAC8-214ENST00000439122 PPARAQ07869 468 aa14.03□□□□□ -0.16
HDAC8-214ENST00000439122 RTN1Q16799 776 aa14.03□□□□□ -0.16
HDAC8-214ENST00000439122 CLEC4GQ6UXB4 293 aa14.03□□□□□ -0.16
HDAC8-214ENST00000439122 BICDL1Q6ZP65 573 aa14.03□□□□□ -0.16
HDAC8-214ENST00000439122 C3orf67Q6ZVT6 689 aa14.03□□□□□ -0.16
HDAC8-214ENST00000439122 WASF1Q92558 559 aa14.03□□□□□ -0.16
HDAC8-214ENST00000439122 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.03□□□□□ -0.16
HDAC8-214ENST00000439122 RNF41Q9H4P4 317 aaPredicted RBP14.03□□□□□ -0.16
HDAC8-214ENST00000439122 MAGEB6P1A0A0J9YX57 407 aa14.02□□□□□ -0.16
HDAC8-214ENST00000439122 PPP6R2O75170 966 aa14.02□□□□□ -0.16
HDAC8-214ENST00000439122 IFNAR1P17181 557 aa14.02□□□□□ -0.16
HDAC8-214ENST00000439122 GTF2E1P29083 439 aaPredicted RBP14.02□□□□□ -0.16
HDAC8-214ENST00000439122 GUCY1A2P33402 732 aa14.02□□□□□ -0.16
HDAC8-214ENST00000439122 TRIM22Q8IYM9 498 aa14.02□□□□□ -0.16
HDAC8-214ENST00000439122 NUP133Q8WUM0 1156 aa14.02□□□□□ -0.16
HDAC8-214ENST00000439122 MAP3K14Q99558 947 aa14.02□□□□□ -0.16
HDAC8-214ENST00000439122 COL4A1P02462 1669 aa14.02□□□□□ -0.16
HDAC8-214ENST00000439122 RREB1Q92766 1687 aa14.02□□□□□ -0.16
HDAC8-214ENST00000439122 STK36Q9NRP7 1315 aa14.02□□□□□ -0.16
HDAC8-214ENST00000439122 PTPAQ15257 358 aa14.02□□□□□ -0.17
HDAC8-214ENST00000439122 BARGINQ6ZT62 677 aa14.02□□□□□ -0.17
HDAC8-214ENST00000439122 FILIP1Q7Z7B0 1213 aa14.02□□□□□ -0.17
HDAC8-214ENST00000439122 CMTR1Q8N1G2 835 aaKnown RBP14.02□□□□□ -0.17
HDAC8-214ENST00000439122 UBAC1Q9BSL1 405 aa14.02□□□□□ -0.17
HDAC8-214ENST00000439122 PDCL3Q9H2J4 239 aa14.02□□□□□ -0.17
HDAC8-214ENST00000439122 BCL9LQ86UU0 1499 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 TIAM2Q8IVF5 1701 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 LAMB2P55268 1798 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 SAFBQ15424 915 aaKnown RBP eCLIP14.01□□□□□ -0.17
HDAC8-214ENST00000439122 CAVIN4Q5BKX8 364 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 SHC4Q6S5L8 630 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 LRRC8AQ8IWT6 810 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 TMTC2Q8N394 836 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 LINC00116Q8NCU8 138 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 CLIC6Q96NY7 704 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 ECM29Q5VYK3 1845 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 ZNF804BA4D1E1 1349 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 BTBD18B2RXH4 712 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 RBM6P78332 1123 aaKnown RBP14.01□□□□□ -0.17
HDAC8-214ENST00000439122 ARID5BQ14865 1188 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 ISM2Q6H9L7 571 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 NOSTRINQ8IVI9 506 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 BSDC1Q9NW68 430 aaPredicted RBP14.01□□□□□ -0.17
HDAC8-214ENST00000439122 KCNJ14Q9UNX9 436 aa14.01□□□□□ -0.17
HDAC8-214ENST00000439122 BCORQ6W2J9 1755 aa14□□□□□ -0.17
HDAC8-214ENST00000439122 CCDC196A0A1B0GTZ2 297 aa14□□□□□ -0.17
HDAC8-214ENST00000439122 NLRP12P59046 1061 aa14□□□□□ -0.17
HDAC8-214ENST00000439122 UBE4AQ14139 1066 aa14□□□□□ -0.17
HDAC8-214ENST00000439122 SF3B3Q15393 1217 aaKnown RBP14□□□□□ -0.17
HDAC8-214ENST00000439122 FAM98CQ17RN3 349 aaKnown RBP14□□□□□ -0.17
HDAC8-214ENST00000439122 SMIM5Q71RC9 77 aa14□□□□□ -0.17
HDAC8-214ENST00000439122 C16orf45Q96MC5 204 aaPredicted RBP14□□□□□ -0.17
HDAC8-214ENST00000439122 BPIFA3Q9BQP9 254 aa14□□□□□ -0.17
HDAC8-214ENST00000439122 MINPP1Q9UNW1 487 aa14□□□□□ -0.17
HDAC8-214ENST00000439122 TAF1P21675 1872 aa14□□□□□ -0.17
HDAC8-214ENST00000439122 MMP1P03956 469 aa13.99□□□□□ -0.17
HDAC8-214ENST00000439122 DIS3L2Q8IYB7 885 aaKnown RBP13.99□□□□□ -0.17
HDAC8-214ENST00000439122 ZNF654Q8IZM8 581 aa13.99□□□□□ -0.17
HDAC8-214ENST00000439122 FANCBQ8NB91 859 aa13.99□□□□□ -0.17
HDAC8-214ENST00000439122 TSC1Q92574 1164 aa13.99□□□□□ -0.17
HDAC8-214ENST00000439122 ESR2Q92731 530 aa13.99□□□□□ -0.17
HDAC8-214ENST00000439122 TIGD1Q96MW7 591 aa13.99□□□□□ -0.17
HDAC8-214ENST00000439122 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.99□□□□□ -0.17
HDAC8-214ENST00000439122 HPSEQ9Y251 543 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms