RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 INHAP05111 366 aa14.24□□□□□ -0.13
CSTF3-203ENST00000438862 BCRP11274 1271 aa14.24□□□□□ -0.13
CSTF3-203ENST00000438862 CRKP46108 304 aa14.24□□□□□ -0.13
CSTF3-203ENST00000438862 IRF5Q13568 498 aa14.24□□□□□ -0.13
CSTF3-203ENST00000438862 CWF19L2Q2TBE0 894 aaKnown RBP14.24□□□□□ -0.13
CSTF3-203ENST00000438862 FAM83AQ86UY5 434 aa14.24□□□□□ -0.13
CSTF3-203ENST00000438862 RUNDC1Q96C34 613 aa14.24□□□□□ -0.13
CSTF3-203ENST00000438862 PARK7Q99497 189 aaKnown RBP14.24□□□□□ -0.13
CSTF3-203ENST00000438862 RPTORQ8N122 1335 aa14.23□□□□□ -0.13
CSTF3-203ENST00000438862 ZNF853P0CG23 659 aa14.23□□□□□ -0.13
CSTF3-203ENST00000438862 FLT3LGP49771 235 aa14.23□□□□□ -0.13
CSTF3-203ENST00000438862 HDLBPQ00341 1268 aaKnown RBP14.23□□□□□ -0.13
CSTF3-203ENST00000438862 FKBP1CQ5VVH2 108 aa14.23□□□□□ -0.13
CSTF3-203ENST00000438862 FAM109BQ6ICB4 259 aaPredicted RBP14.23□□□□□ -0.13
CSTF3-203ENST00000438862 CCDC146Q8IYE0 955 aa14.23□□□□□ -0.13
CSTF3-203ENST00000438862 C7orf61Q8IZ16 206 aa14.23□□□□□ -0.13
CSTF3-203ENST00000438862 TDRD7Q8NHU6 1098 aaKnown RBP14.23□□□□□ -0.13
CSTF3-203ENST00000438862 ZMYND8Q9ULU4 1186 aaPredicted RBP14.23□□□□□ -0.13
CSTF3-203ENST00000438862 KCNH4Q9UQ05 1017 aa14.23□□□□□ -0.13
CSTF3-203ENST00000438862 MAGEA10P43363 369 aaPredicted RBP14.22□□□□□ -0.13
CSTF3-203ENST00000438862 GNAI1P63096 354 aa14.22□□□□□ -0.13
CSTF3-203ENST00000438862 ZNF341Q9BYN7 854 aa14.22□□□□□ -0.13
CSTF3-203ENST00000438862 UBE2OQ9C0C9 1292 aaKnown RBP14.22□□□□□ -0.13
CSTF3-203ENST00000438862 ELNP15502 786 aa14.21□□□□□ -0.13
CSTF3-203ENST00000438862 IFIT5Q13325 482 aaKnown RBP14.21□□□□□ -0.13
CSTF3-203ENST00000438862 GCKRQ14397 625 aa14.21□□□□□ -0.13
CSTF3-203ENST00000438862 MRIQ9BWK5 157 aa14.21□□□□□ -0.13
CSTF3-203ENST00000438862 NBPF3Q9H094 633 aa14.21□□□□□ -0.13
CSTF3-203ENST00000438862 IFT57Q9NWB7 429 aa14.21□□□□□ -0.13
CSTF3-203ENST00000438862 TMOD2Q9NZR1 351 aa14.21□□□□□ -0.13
CSTF3-203ENST00000438862 CASP7P55210 303 aa14.2□□□□□ -0.14
CSTF3-203ENST00000438862 CALD1Q05682 793 aaKnown RBP14.2□□□□□ -0.14
CSTF3-203ENST00000438862 MOGSQ13724 837 aa14.2□□□□□ -0.14
CSTF3-203ENST00000438862 MYH16Q9H6N6 1097 aa14.2□□□□□ -0.14
CSTF3-203ENST00000438862 CXCL11O14625 94 aa14.19□□□□□ -0.14
CSTF3-203ENST00000438862 TNPO2O14787 897 aaKnown RBP14.19□□□□□ -0.14
CSTF3-203ENST00000438862 SYN1P17600 705 aa14.19□□□□□ -0.14
CSTF3-203ENST00000438862 HIBADHP31937 336 aaKnown RBP14.19□□□□□ -0.14
CSTF3-203ENST00000438862 INPP5BP32019 993 aa14.19□□□□□ -0.14
CSTF3-203ENST00000438862 C8orf58Q8NAV2 365 aa14.19□□□□□ -0.14
CSTF3-203ENST00000438862 DIS3LQ8TF46 1054 aaKnown RBP14.19□□□□□ -0.14
CSTF3-203ENST00000438862 TEKT1Q969V4 418 aa14.19□□□□□ -0.14
CSTF3-203ENST00000438862 ZNF112Q9UJU3 913 aa14.19□□□□□ -0.14
CSTF3-203ENST00000438862 A0A1B0GUL6 1792 aa14.19□□□□□ -0.14
CSTF3-203ENST00000438862 PLIN1O60240 522 aa14.18□□□□□ -0.14
CSTF3-203ENST00000438862 CYP2C8P10632 490 aa14.18□□□□□ -0.14
CSTF3-203ENST00000438862 CACNB3P54284 484 aa14.18□□□□□ -0.14
CSTF3-203ENST00000438862 UBE4AQ14139 1066 aa14.18□□□□□ -0.14
CSTF3-203ENST00000438862 GPAT2Q6NUI2 795 aa14.18□□□□□ -0.14
CSTF3-203ENST00000438862 MIGA2Q7L4E1 593 aa14.18□□□□□ -0.14
CSTF3-203ENST00000438862 FASTKD5Q7L8L6 764 aaKnown RBP14.18□□□□□ -0.14
CSTF3-203ENST00000438862 COA7Q96BR5 231 aa14.18□□□□□ -0.14
CSTF3-203ENST00000438862 GUCD1Q96NT3 240 aa14.18□□□□□ -0.14
CSTF3-203ENST00000438862 STK31Q9BXU1 1019 aa14.18□□□□□ -0.14
CSTF3-203ENST00000438862 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.18□□□□□ -0.14
CSTF3-203ENST00000438862 RPAP1Q9BWH6 1393 aaPredicted RBP14.18□□□□□ -0.14
CSTF3-203ENST00000438862 VCANP13611 3396 aa14.17□□□□□ -0.14
CSTF3-203ENST00000438862 LDHAL6AQ6ZMR3 332 aa14.17□□□□□ -0.14
CSTF3-203ENST00000438862 TBC1D22AQ8WUA7 517 aa14.17□□□□□ -0.14
CSTF3-203ENST00000438862 SYMPKQ92797 1274 aaKnown RBP14.17□□□□□ -0.14
CSTF3-203ENST00000438862 FAM84BQ96KN1 310 aaPredicted RBP14.17□□□□□ -0.14
CSTF3-203ENST00000438862 ZDHHC15Q96MV8 337 aa14.17□□□□□ -0.14
CSTF3-203ENST00000438862 C11orf49Q9H6J7 331 aa14.17□□□□□ -0.14
CSTF3-203ENST00000438862 SLC45A1Q9Y2W3 748 aa14.17□□□□□ -0.14
CSTF3-203ENST00000438862 RALBP1Q15311 655 aa14.16□□□□□ -0.14
CSTF3-203ENST00000438862 NOL9Q5SY16 702 aaKnown RBP14.16□□□□□ -0.14
CSTF3-203ENST00000438862 GYG1P46976 350 aa14.15□□□□□ -0.14
CSTF3-203ENST00000438862 FOXO4P98177 505 aa14.15□□□□□ -0.14
CSTF3-203ENST00000438862 WDR43Q15061 677 aaKnown RBP eCLIP14.15□□□□□ -0.14
CSTF3-203ENST00000438862 CCDC57Q2TAC2 916 aa14.15□□□□□ -0.14
CSTF3-203ENST00000438862 VARS2Q5ST30 1063 aaKnown RBP14.15□□□□□ -0.14
CSTF3-203ENST00000438862 LINS1Q8NG48 757 aa14.15□□□□□ -0.14
CSTF3-203ENST00000438862 FAM151AQ8WW52 585 aa14.15□□□□□ -0.14
CSTF3-203ENST00000438862 HMX1Q9NP08 348 aaPredicted RBP14.15□□□□□ -0.14
CSTF3-203ENST00000438862 CNNM1Q9NRU3 951 aa14.15□□□□□ -0.14
CSTF3-203ENST00000438862 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
CSTF3-203ENST00000438862 CHMP3Q9Y3E7 222 aa14.15□□□□□ -0.14
CSTF3-203ENST00000438862 HMGCRP04035 888 aa14.14□□□□□ -0.15
CSTF3-203ENST00000438862 GRIK5Q16478 980 aa14.14□□□□□ -0.15
CSTF3-203ENST00000438862 TAF7LQ5H9L4 462 aa14.14□□□□□ -0.15
CSTF3-203ENST00000438862 APOBEC3HQ6NTF7 200 aaKnown RBP14.14□□□□□ -0.15
CSTF3-203ENST00000438862 OGDHLQ9ULD0 1010 aa14.14□□□□□ -0.15
CSTF3-203ENST00000438862 SUGT1Q9Y2Z0 365 aa14.14□□□□□ -0.15
CSTF3-203ENST00000438862 MAST3O60307 1309 aa14.14□□□□□ -0.15
CSTF3-203ENST00000438862 SPTBN5Q9NRC6 3674 aaKnown RBP14.13□□□□□ -0.15
CSTF3-203ENST00000438862 A0A0G2JLL6 359 aaPredicted RBP14.13□□□□□ -0.15
CSTF3-203ENST00000438862 COL9A1P20849 921 aa14.13□□□□□ -0.15
CSTF3-203ENST00000438862 ZNF697Q5TEC3 545 aa14.13□□□□□ -0.15
CSTF3-203ENST00000438862 HHIPL2Q6UWX4 724 aa14.13□□□□□ -0.15
CSTF3-203ENST00000438862 PRRT2Q7Z6L0 340 aaPredicted RBP14.13□□□□□ -0.15
CSTF3-203ENST00000438862 VPS37DQ86XT2 251 aa14.13□□□□□ -0.15
CSTF3-203ENST00000438862 SMCR8Q8TEV9 937 aaPredicted RBP14.13□□□□□ -0.15
CSTF3-203ENST00000438862 ZSWIM6Q9HCJ5 1215 aa14.13□□□□□ -0.15
CSTF3-203ENST00000438862 DOCK3Q8IZD9 2030 aa14.13□□□□□ -0.15
CSTF3-203ENST00000438862 AK9Q5TCS8 1911 aa14.12□□□□□ -0.15
CSTF3-203ENST00000438862 FRAT2O75474 233 aaPredicted RBP14.12□□□□□ -0.15
CSTF3-203ENST00000438862 G2E3Q7L622 706 aa14.12□□□□□ -0.15
CSTF3-203ENST00000438862 FBXO33Q7Z6M2 555 aa14.12□□□□□ -0.15
CSTF3-203ENST00000438862 TSPYL6Q8N831 410 aa14.12□□□□□ -0.15
CSTF3-203ENST00000438862 FBXO22Q8NEZ5 403 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms