RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ERICH6Q7L0X2 663 aa5.7□□□□□ -1.5
HMGB1P18-201ENST00000438801 SULF2Q8IWU5 870 aa5.7□□□□□ -1.5
HMGB1P18-201ENST00000438801 GNEQ9Y223 722 aaKnown RBP5.7□□□□□ -1.5
HMGB1P18-201ENST00000438801 AKAP2Q9Y2D5 859 aa5.7□□□□□ -1.5
HMGB1P18-201ENST00000438801 PNMA6FA0A0J9YX94 578 aa5.69□□□□□ -1.5
HMGB1P18-201ENST00000438801 HCLS1P14317 486 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P18-201ENST00000438801 ARNTP27540 789 aa5.69□□□□□ -1.5
HMGB1P18-201ENST00000438801 PLCB3Q01970 1234 aa5.69□□□□□ -1.5
HMGB1P18-201ENST00000438801 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P18-201ENST00000438801 STK11IPQ8N1F8 1099 aa5.69□□□□□ -1.5
HMGB1P18-201ENST00000438801 STK35Q8TDR2 534 aa5.69□□□□□ -1.5
HMGB1P18-201ENST00000438801 ASIC4Q96FT7 647 aa5.69□□□□□ -1.5
HMGB1P18-201ENST00000438801 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
HMGB1P18-201ENST00000438801 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
HMGB1P18-201ENST00000438801 PCOLCE2Q9UKZ9 415 aa5.69□□□□□ -1.5
HMGB1P18-201ENST00000438801 TREHO43280 583 aa5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 BRD1O95696 1058 aa5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 JUNBP17275 347 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 ITGB5P18084 799 aa5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 NME2P22392 152 aa5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 MAPK1P28482 360 aa5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 PLCL1Q15111 1095 aa5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 ENOX2Q16206 610 aaKnown RBP5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 MAP1SQ66K74 1059 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 ZNF574Q6ZN55 896 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 SPRED2Q7Z698 418 aa5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 PLD6Q8N2A8 252 aaKnown RBP5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 FAM181AQ8N9Y4 354 aa5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 NETO1Q8TDF5 533 aa5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 MISP3Q96FF7 219 aa5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 EMILIN2Q9BXX0 1053 aa5.68□□□□□ -1.5
HMGB1P18-201ENST00000438801 LEFTY1O75610 366 aa5.67□□□□□ -1.5
HMGB1P18-201ENST00000438801 NEFMP07197 916 aa5.67□□□□□ -1.5
HMGB1P18-201ENST00000438801 ZNF252P-AS1Q0IIN9 211 aa5.67□□□□□ -1.5
HMGB1P18-201ENST00000438801 BNIP3Q12983 259 aa5.67□□□□□ -1.5
HMGB1P18-201ENST00000438801 ZC3H12AQ5D1E8 599 aaKnown RBP5.67□□□□□ -1.5
HMGB1P18-201ENST00000438801 WFDC3Q8IUB2 231 aa5.67□□□□□ -1.5
HMGB1P18-201ENST00000438801 GPBAR1Q8TDU6 330 aa5.67□□□□□ -1.5
HMGB1P18-201ENST00000438801 SSU72Q9NP77 194 aaKnown RBP5.67□□□□□ -1.5
HMGB1P18-201ENST00000438801 ERVK-24P63145 666 aa5.66□□□□□ -1.5
HMGB1P18-201ENST00000438801 OGFOD2Q6N063 350 aa5.66□□□□□ -1.5
HMGB1P18-201ENST00000438801 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGB1P18-201ENST00000438801 RNF214Q8ND24 703 aa5.66□□□□□ -1.5
HMGB1P18-201ENST00000438801 C3orf58Q8NDZ4 430 aa5.66□□□□□ -1.5
HMGB1P18-201ENST00000438801 ISL2Q96A47 359 aa5.66□□□□□ -1.5
HMGB1P18-201ENST00000438801 NECAB3Q96P71 396 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P18-201ENST00000438801 DUSP23Q9BVJ7 150 aa5.66□□□□□ -1.5
HMGB1P18-201ENST00000438801 CBX8Q9HC52 389 aa5.66□□□□□ -1.5
HMGB1P18-201ENST00000438801 U3KQE9 123 aa5.66□□□□□ -1.5
HMGB1P18-201ENST00000438801 UNC13AQ9UPW8 1703 aa5.65□□□□□ -1.5
HMGB1P18-201ENST00000438801 PRKCQQ04759 706 aa5.65□□□□□ -1.5
HMGB1P18-201ENST00000438801 ZNF792Q3KQV3 632 aa5.65□□□□□ -1.5
HMGB1P18-201ENST00000438801 TPTE2Q6XPS3 522 aa5.65□□□□□ -1.5
HMGB1P18-201ENST00000438801 ARHGAP27Q6ZUM4 889 aa5.65□□□□□ -1.5
HMGB1P18-201ENST00000438801 ACSBG1Q96GR2 724 aa5.65□□□□□ -1.5
HMGB1P18-201ENST00000438801 SRCIN1Q9C0H9 1055 aa5.65□□□□□ -1.5
HMGB1P18-201ENST00000438801 MKNK2Q9HBH9 465 aa5.65□□□□□ -1.5
HMGB1P18-201ENST00000438801 CACNA2D2Q9NY47 1150 aa5.65□□□□□ -1.5
HMGB1P18-201ENST00000438801 VAV3Q9UKW4 847 aa5.65□□□□□ -1.5
HMGB1P18-201ENST00000438801 PAPLNO95428 1278 aa5.64□□□□□ -1.51
HMGB1P18-201ENST00000438801 CD8BP10966 210 aa5.64□□□□□ -1.51
HMGB1P18-201ENST00000438801 BMP6P22004 513 aa5.64□□□□□ -1.51
HMGB1P18-201ENST00000438801 GSTT1P30711 240 aa5.64□□□□□ -1.51
HMGB1P18-201ENST00000438801 MAPK8P45983 427 aa5.64□□□□□ -1.51
HMGB1P18-201ENST00000438801 OXCT1P55809 520 aa5.64□□□□□ -1.51
HMGB1P18-201ENST00000438801 IFI16Q16666 785 aaKnown RBP5.64□□□□□ -1.51
HMGB1P18-201ENST00000438801 MPRIPQ6WCQ1 1025 aa5.64□□□□□ -1.51
HMGB1P18-201ENST00000438801 TOP6BLQ8N6T0 577 aa5.64□□□□□ -1.51
HMGB1P18-201ENST00000438801 FBF1Q8TES7 1133 aa5.64□□□□□ -1.51
HMGB1P18-201ENST00000438801 BIN1O00499 593 aa5.63□□□□□ -1.51
HMGB1P18-201ENST00000438801 ENC1O14682 589 aa5.63□□□□□ -1.51
HMGB1P18-201ENST00000438801 CEACAM5P06731 702 aa5.63□□□□□ -1.51
HMGB1P18-201ENST00000438801 FUT4P22083 530 aa5.63□□□□□ -1.51
HMGB1P18-201ENST00000438801 FMR1Q06787 632 aaKnown RBP eCLIP5.63□□□□□ -1.51
HMGB1P18-201ENST00000438801 ZSCAN29Q8IWY8 852 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P18-201ENST00000438801 GRIN3AQ8TCU5 1115 aa5.63□□□□□ -1.51
HMGB1P18-201ENST00000438801 OSBPL7Q9BZF2 842 aa5.63□□□□□ -1.51
HMGB1P18-201ENST00000438801 CEP44Q9C0F1 390 aa5.63□□□□□ -1.51
HMGB1P18-201ENST00000438801 SAMM50Q9Y512 469 aa5.63□□□□□ -1.51
HMGB1P18-201ENST00000438801 CSADQ9Y600 493 aa5.63□□□□□ -1.51
HMGB1P18-201ENST00000438801 TMEM265A0A087WTH1 108 aa5.62□□□□□ -1.51
HMGB1P18-201ENST00000438801 PAGE1O75459 146 aa5.62□□□□□ -1.51
HMGB1P18-201ENST00000438801 TRIM37O94972 964 aa5.62□□□□□ -1.51
HMGB1P18-201ENST00000438801 CD96P40200 585 aa5.62□□□□□ -1.51
HMGB1P18-201ENST00000438801 AOC3Q16853 763 aa5.62□□□□□ -1.51
HMGB1P18-201ENST00000438801 PPM1JQ5JR12 505 aa5.62□□□□□ -1.51
HMGB1P18-201ENST00000438801 POU5F2Q8N7G0 328 aa5.62□□□□□ -1.51
HMGB1P18-201ENST00000438801 HRASLS5Q96KN8 279 aa5.62□□□□□ -1.51
HMGB1P18-201ENST00000438801 SETDB2Q96T68 719 aa5.62□□□□□ -1.51
HMGB1P18-201ENST00000438801 PPM1HQ9ULR3 514 aa5.62□□□□□ -1.51
HMGB1P18-201ENST00000438801 PLAGL2Q9UPG8 496 aa5.62□□□□□ -1.51
HMGB1P18-201ENST00000438801 DCDC2CA8MYV0 355 aa5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 GIPC1O14908 333 aa5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 FBXO24O75426 580 aa5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 RNASE1P07998 156 aaKnown RBP5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 ITIH2P19823 946 aa5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 NTF4P34130 210 aa5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 EIF4G1Q04637 1599 aaKnown RBP5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 RING1Q06587 406 aa5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 LRRC14Q15048 493 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms