RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 LRRC4BQ9NT99 713 aa9.28□□□□□ -0.92
HMGB2-202ENST00000438704 DBNLQ9UJU6 430 aaKnown RBP9.28□□□□□ -0.92
HMGB2-202ENST00000438704 CDV3Q9UKY7 258 aaKnown RBP9.28□□□□□ -0.92
HMGB2-202ENST00000438704 AKAP2Q9Y2D5 859 aa9.28□□□□□ -0.92
HMGB2-202ENST00000438704 DDX60Q8IY21 1712 aaKnown RBP9.28□□□□□ -0.92
HMGB2-202ENST00000438704 UBR3Q6ZT12 1888 aa9.28□□□□□ -0.92
HMGB2-202ENST00000438704 SPEF2Q9C093 1822 aa9.27□□□□□ -0.93
HMGB2-202ENST00000438704 PPFIA3O75145 1194 aa9.27□□□□□ -0.93
HMGB2-202ENST00000438704 PRKCSHP14314 528 aaPredicted RBP9.27□□□□□ -0.93
HMGB2-202ENST00000438704 ERFEQ4G0M1 354 aa9.27□□□□□ -0.93
HMGB2-202ENST00000438704 CCDC152Q4G0S7 254 aa9.27□□□□□ -0.93
HMGB2-202ENST00000438704 TSHZ3Q63HK5 1081 aa9.27□□□□□ -0.93
HMGB2-202ENST00000438704 PDXDC2PQ6P474 469 aa9.27□□□□□ -0.93
HMGB2-202ENST00000438704 SYNE4Q8N205 404 aa9.27□□□□□ -0.93
HMGB2-202ENST00000438704 VGLL2Q8N8G2 317 aa9.27□□□□□ -0.93
HMGB2-202ENST00000438704 SNX21Q969T3 373 aa9.27□□□□□ -0.93
HMGB2-202ENST00000438704 ARXQ96QS3 562 aa9.27□□□□□ -0.93
HMGB2-202ENST00000438704 GREM2Q9H772 168 aa9.27□□□□□ -0.93
HMGB2-202ENST00000438704 CEP126Q9P2H0 1117 aa9.27□□□□□ -0.93
HMGB2-202ENST00000438704 RAD50Q92878 1312 aa9.27□□□□□ -0.93
HMGB2-202ENST00000438704 ZC3H4Q9UPT8 1303 aaKnown RBP9.27□□□□□ -0.93
HMGB2-202ENST00000438704 C4AP0C0L4 1744 aa9.26□□□□□ -0.93
HMGB2-202ENST00000438704 LRRC24Q50LG9 513 aa9.26□□□□□ -0.93
HMGB2-202ENST00000438704 TRAPPC3LQ5T215 181 aa9.26□□□□□ -0.93
HMGB2-202ENST00000438704 KIF2CQ99661 725 aa9.26□□□□□ -0.93
HMGB2-202ENST00000438704 HAUS7Q99871 368 aa9.26□□□□□ -0.93
HMGB2-202ENST00000438704 TLR7Q9NYK1 1049 aaKnown RBP9.26□□□□□ -0.93
HMGB2-202ENST00000438704 RGS17Q9UGC6 210 aaPredicted RBP9.26□□□□□ -0.93
HMGB2-202ENST00000438704 DNMT3LQ9UJW3 386 aa9.26□□□□□ -0.93
HMGB2-202ENST00000438704 CHMP3Q9Y3E7 222 aa9.26□□□□□ -0.93
HMGB2-202ENST00000438704 MROH5Q6ZUA9 1318 aa9.26□□□□□ -0.93
HMGB2-202ENST00000438704 SGSM2O43147 1006 aa9.25□□□□□ -0.93
HMGB2-202ENST00000438704 TRIM37O94972 964 aa9.25□□□□□ -0.93
HMGB2-202ENST00000438704 FGFR2P21802 821 aa9.25□□□□□ -0.93
HMGB2-202ENST00000438704 ANAPC15P60006 121 aa9.25□□□□□ -0.93
HMGB2-202ENST00000438704 USPL1Q5W0Q7 1092 aa9.25□□□□□ -0.93
HMGB2-202ENST00000438704 TBC1D9BQ66K14 1250 aa9.25□□□□□ -0.93
HMGB2-202ENST00000438704 AMIGO3Q86WK7 504 aa9.25□□□□□ -0.93
HMGB2-202ENST00000438704 RUFY2Q8WXA3 655 aa9.25□□□□□ -0.93
HMGB2-202ENST00000438704 ZNF594Q96JF6 807 aaPredicted RBP9.25□□□□□ -0.93
HMGB2-202ENST00000438704 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
HMGB2-202ENST00000438704 DBNDD2Q9BQY9 259 aa9.25□□□□□ -0.93
HMGB2-202ENST00000438704 PUS3Q9BZE2 481 aaKnown RBP9.25□□□□□ -0.93
HMGB2-202ENST00000438704 CCDC8Q9H0W5 538 aaPredicted RBP9.25□□□□□ -0.93
HMGB2-202ENST00000438704 PGPEP1Q9NXJ5 209 aa9.25□□□□□ -0.93
HMGB2-202ENST00000438704 AK9Q5TCS8 1911 aa9.25□□□□□ -0.93
HMGB2-202ENST00000438704 CARMIL3Q8ND23 1372 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 A0A1B0GUL7 405 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 PDE8BO95263 885 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 RFC4P35249 363 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 KCNQ4P56696 695 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 CTDSPL2Q05D32 466 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 BECN1Q14457 450 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 TXNRD1Q16881 649 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.24□□□□□ -0.931e-23■■□□□ 12.3
HMGB2-202ENST00000438704 TAF7LQ5H9L4 462 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 TPTE2Q6XPS3 522 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 LDHAL6AQ6ZMR3 332 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 Q6ZVU0 165 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 RILPL2Q969X0 211 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 CDC5LQ99459 802 aaKnown RBP9.24□□□□□ -0.93
HMGB2-202ENST00000438704 ARHGAP9Q9BRR9 750 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 POLR3EQ9NVU0 708 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 FKBPLQ9UIM3 349 aa9.24□□□□□ -0.93
HMGB2-202ENST00000438704 ARAP2Q8WZ64 1704 aa9.23□□□□□ -0.93
HMGB2-202ENST00000438704 HCLS1P14317 486 aaPredicted RBP9.23□□□□□ -0.93
HMGB2-202ENST00000438704 RABEP1Q15276 862 aa9.23□□□□□ -0.93
HMGB2-202ENST00000438704 PPP1R26Q5T8A7 1209 aaPredicted RBP9.23□□□□□ -0.93
HMGB2-202ENST00000438704 FLAD1Q8NFF5 587 aa9.23□□□□□ -0.93
HMGB2-202ENST00000438704 KCNB2Q92953 911 aa9.23□□□□□ -0.93
HMGB2-202ENST00000438704 SLC10A4Q96EP9 437 aa9.23□□□□□ -0.93
HMGB2-202ENST00000438704 SRP68Q9UHB9 627 aaKnown RBP9.23□□□□□ -0.93
HMGB2-202ENST00000438704 MED23Q9ULK4 1368 aa9.23□□□□□ -0.93
HMGB2-202ENST00000438704 TNS1Q9HBL0 1735 aaKnown RBP9.22□□□□□ -0.93
HMGB2-202ENST00000438704 TTLL8A6PVC2 850 aa9.22□□□□□ -0.93
HMGB2-202ENST00000438704 GYS1P13807 737 aa9.22□□□□□ -0.93
HMGB2-202ENST00000438704 TM4SF1P30408 202 aa9.22□□□□□ -0.93
HMGB2-202ENST00000438704 IGHMBP2P38935 993 aaKnown RBP9.22□□□□□ -0.93
HMGB2-202ENST00000438704 DHX9Q08211 1270 aaKnown RBP9.22□□□□□ -0.93
HMGB2-202ENST00000438704 PUM3Q15397 648 aaKnown RBP9.22□□□□□ -0.93
HMGB2-202ENST00000438704 SKIV2LQ15477 1246 aaKnown RBP9.22□□□□□ -0.93
HMGB2-202ENST00000438704 ATP2B3Q16720 1220 aa9.22□□□□□ -0.93
HMGB2-202ENST00000438704 SH3D19Q5HYK7 790 aa9.22□□□□□ -0.93
HMGB2-202ENST00000438704 METTL24Q5JXM2 366 aa9.22□□□□□ -0.93
HMGB2-202ENST00000438704 POTEAQ6S8J7 498 aa9.22□□□□□ -0.93
HMGB2-202ENST00000438704 NBPF5PQ86XG9 351 aaPredicted RBP9.22□□□□□ -0.93
HMGB2-202ENST00000438704 KBTBD3Q8NAB2 608 aa9.22□□□□□ -0.93
HMGB2-202ENST00000438704 LPIN2Q92539 896 aa9.22□□□□□ -0.93
HMGB2-202ENST00000438704 XAGE2Q96GT9 111 aa9.22□□□□□ -0.93
HMGB2-202ENST00000438704 LSG1Q9H089 658 aaKnown RBP9.22□□□□□ -0.93
HMGB2-202ENST00000438704 BOLA2Q9H3K6 86 aa9.22□□□□□ -0.93
HMGB2-202ENST00000438704 CNNM1Q9NRU3 951 aa9.22□□□□□ -0.93
HMGB2-202ENST00000438704 DIAPH3Q9NSV4 1193 aa9.22□□□□□ -0.93
HMGB2-202ENST00000438704 BSDC1Q9NW68 430 aaPredicted RBP9.22□□□□□ -0.93
HMGB2-202ENST00000438704 KLRG2A4D1S0 409 aaPredicted RBP9.21□□□□□ -0.94
HMGB2-202ENST00000438704 SPINT1O43278 529 aa9.21□□□□□ -0.94
HMGB2-202ENST00000438704 UQCRFS1P1P0C7P4 283 aa9.21□□□□□ -0.94
HMGB2-202ENST00000438704 MCCP23508 829 aa9.21□□□□□ -0.94
HMGB2-202ENST00000438704 ARID4AP29374 1257 aaPredicted RBP9.21□□□□□ -0.94
HMGB2-202ENST00000438704 HSPA4P34932 840 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms