RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 MAP3K11Q16584 847 aa10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 TBC1D9Q6ZT07 1266 aa10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 EAF2Q96CJ1 260 aaPredicted RBP10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 CLMNQ96JQ2 1002 aa10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 YTHDC1Q96MU7 727 aaKnown RBP10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 GPR108Q9NPR9 543 aa10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 DBNLQ9UJU6 430 aaKnown RBP10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 DDX19BQ9UMR2 479 aa10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 ANGEL1Q9UNK9 670 aaKnown RBP10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 PPP2R3BQ9Y5P8 575 aa10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 MAST3O60307 1309 aa10.53□□□□□ -0.72
HERPUD2-206ENST00000438224 MYH7P12883 1935 aa10.52□□□□□ -0.72
HERPUD2-206ENST00000438224 A6NJR5 290 aa10.52□□□□□ -0.73
HERPUD2-206ENST00000438224 SPDYE16A6NNV3 312 aaPredicted RBP10.52□□□□□ -0.73
HERPUD2-206ENST00000438224 LDHBP07195 334 aaKnown RBP10.52□□□□□ -0.73
HERPUD2-206ENST00000438224 MS4A1P11836 297 aa10.52□□□□□ -0.73
HERPUD2-206ENST00000438224 NF2P35240 595 aa10.52□□□□□ -0.73
HERPUD2-206ENST00000438224 OS9Q13438 667 aaPredicted RBP10.52□□□□□ -0.73
HERPUD2-206ENST00000438224 PDE3AQ14432 1141 aa10.52□□□□□ -0.73
HERPUD2-206ENST00000438224 CDC42EP5Q6NZY7 148 aa10.52□□□□□ -0.73
HERPUD2-206ENST00000438224 CCDC82Q8N4S0 544 aa10.52□□□□□ -0.73
HERPUD2-206ENST00000438224 CCDC102AQ96A19 550 aa10.52□□□□□ -0.73
HERPUD2-206ENST00000438224 CSRNP1Q96S65 589 aa10.52□□□□□ -0.73
HERPUD2-206ENST00000438224 PTPRFP10586 1907 aa10.52□□□□□ -0.73
HERPUD2-206ENST00000438224 GAKO14976 1311 aa10.52□□□□□ -0.73
HERPUD2-206ENST00000438224 GJA5P36382 358 aa10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 MECOMQ03112 1051 aa10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 NFIAQ12857 509 aa10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 TNFAIP1Q13829 316 aa10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 ARMC9Q7Z3E5 817 aa10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 SPATA5Q8NB90 893 aa10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 AIDAQ96BJ3 306 aa10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 CCDC8Q9H0W5 538 aaPredicted RBP10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 SNRKQ9NRH2 765 aa10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 FAM198AQ9UFP1 575 aa10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 ABCF2Q9UG63 623 aa10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 PHIPQ8WWQ0 1821 aa10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 ATAD5Q96QE3 1844 aa10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 RPAP1Q9BWH6 1393 aaPredicted RBP10.51□□□□□ -0.73
HERPUD2-206ENST00000438224 MYH1P12882 1939 aa10.5□□□□□ -0.73
HERPUD2-206ENST00000438224 CLCN6P51797 869 aa10.5□□□□□ -0.73
HERPUD2-206ENST00000438224 PPP1R15BQ5SWA1 713 aa10.5□□□□□ -0.73
HERPUD2-206ENST00000438224 GORABQ5T7V8 394 aa10.5□□□□□ -0.73
HERPUD2-206ENST00000438224 FKBP1CQ5VVH2 108 aa10.5□□□□□ -0.73
HERPUD2-206ENST00000438224 FAM83AQ86UY5 434 aa10.5□□□□□ -0.73
HERPUD2-206ENST00000438224 ZFPM1Q8IX07 1006 aa10.5□□□□□ -0.73
HERPUD2-206ENST00000438224 IL1RAPL2Q9NP60 686 aa10.5□□□□□ -0.73
HERPUD2-206ENST00000438224 PRDM10Q9NQV6 1147 aa10.5□□□□□ -0.73
HERPUD2-206ENST00000438224 DOCK1Q14185 1865 aa10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 CYP2E1P05181 493 aaPredicted RBP10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 SLURP2P0DP57 97 aa10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 TCP10Q12799 353 aa10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 AMHR2Q16671 573 aa10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 SUPT20HL1Q3ZLR7 823 aa10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 SPRYD7Q5W111 196 aa10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 DZIP1Q86YF9 867 aaKnown RBP10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 RPAP2Q8IXW5 612 aaPredicted RBP10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 RHPN1Q8TCX5 695 aa10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 NSUN4Q96CB9 384 aaKnown RBP10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 FAM163AQ96GL9 167 aaPredicted RBP10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 GOPCQ9HD26 462 aa10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 DDX4Q9NQI0 724 aaKnown RBP10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 PIH1D3Q9NQM4 214 aaKnown RBP10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 RNF186Q9NXI6 227 aa10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 NDUFB9Q9Y6M9 179 aa10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 MROH7-TTC4A0A0A0MT08 1334 aa10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 ATRNL1Q5VV63 1379 aa10.49□□□□□ -0.73
HERPUD2-206ENST00000438224 PPP1R12BO60237 982 aaPredicted RBP10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 TRAK2O60296 914 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 WDHD1O75717 1129 aaPredicted RBP10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 UQCRFS1P1P0C7P4 283 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 BTDP43251 543 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 ZAP70P43403 619 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 TNNI2P48788 182 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 RRP1P56182 461 aaKnown RBP10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 RHBDL3P58872 404 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 MAP2K5Q13163 448 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 TTC39AQ5SRH9 613 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 SH3BP5LQ7L8J4 393 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 ADGRA1Q86SQ6 560 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 AACSQ86V21 672 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 ZGPATQ8N5A5 531 aaKnown RBP10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 WNK4Q96J92 1243 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 ZNF512BQ96KM6 892 aaPredicted RBP10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 USP40Q9NVE5 1235 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 TMOD2Q9NZR1 351 aa10.48□□□□□ -0.73
HERPUD2-206ENST00000438224 DDX60LQ5H9U9 1706 aaKnown RBP10.47□□□□□ -0.73
HERPUD2-206ENST00000438224 GPR75-ASB3A0A0A6YYF3 556 aa10.47□□□□□ -0.73
HERPUD2-206ENST00000438224 DPYSL4O14531 572 aa10.47□□□□□ -0.73
HERPUD2-206ENST00000438224 TRPA1O75762 1119 aa10.47□□□□□ -0.73
HERPUD2-206ENST00000438224 IREB2P48200 963 aaKnown RBP10.47□□□□□ -0.73
HERPUD2-206ENST00000438224 RGS3P49796 1198 aa10.47□□□□□ -0.73
HERPUD2-206ENST00000438224 VGLL4Q14135 290 aa10.47□□□□□ -0.73
HERPUD2-206ENST00000438224 CCDC158Q5M9N0 1113 aa10.47□□□□□ -0.73
HERPUD2-206ENST00000438224 SPTY2D1Q68D10 685 aaPredicted RBP10.47□□□□□ -0.73
HERPUD2-206ENST00000438224 PARP9Q8IXQ6 854 aa10.47□□□□□ -0.73
HERPUD2-206ENST00000438224 TNS4Q8IZW8 715 aa10.47□□□□□ -0.73
HERPUD2-206ENST00000438224 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms