RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 TMEM67Q5HYA8 995 aa24.8■■□□□ 1.56
PTPRF-207ENST00000436724 GIMAP6Q6P9H5 292 aa24.8■■□□□ 1.56
PTPRF-207ENST00000436724 TMED8Q6PL24 325 aaPredicted RBP24.8■■□□□ 1.56
PTPRF-207ENST00000436724 TMEM87BQ96K49 555 aa24.8■■□□□ 1.56
PTPRF-207ENST00000436724 LY9Q9HBG7 655 aa24.8■■□□□ 1.56
PTPRF-207ENST00000436724 MROH7-TTC4A0A0A0MT08 1334 aa24.8■■□□□ 1.56
PTPRF-207ENST00000436724 CYP2D6P10635 497 aa24.8■■□□□ 1.56
PTPRF-207ENST00000436724 FERMT3Q86UX7 667 aa24.8■■□□□ 1.56
PTPRF-207ENST00000436724 RNF41Q9H4P4 317 aaPredicted RBP24.8■■□□□ 1.56
PTPRF-207ENST00000436724 ATP8A2Q9NTI2 1148 aa24.8■■□□□ 1.56
PTPRF-207ENST00000436724 FAM205AQ6ZU69 1335 aa24.79■■□□□ 1.56
PTPRF-207ENST00000436724 IFIT3O14879 490 aaKnown RBP24.79■■□□□ 1.56
PTPRF-207ENST00000436724 PRDM1O75626 825 aa24.79■■□□□ 1.56
PTPRF-207ENST00000436724 RTFDC1Q9BY42 306 aaPredicted RBP24.79■■□□□ 1.56
PTPRF-207ENST00000436724 MXD3Q9BW11 206 aa24.78■■□□□ 1.56
PTPRF-207ENST00000436724 APOA5Q6Q788 366 aa24.78■■□□□ 1.56
PTPRF-207ENST00000436724 FAM184AQ8NB25 1140 aa24.78■■□□□ 1.56
PTPRF-207ENST00000436724 TBC1D22AQ8WUA7 517 aa24.78■■□□□ 1.56
PTPRF-207ENST00000436724 MYL10Q9BUA6 226 aa24.78■■□□□ 1.56
PTPRF-207ENST00000436724 PTMSP20962 102 aa24.77■■□□□ 1.56
PTPRF-207ENST00000436724 FOSBP53539 338 aa24.77■■□□□ 1.56
PTPRF-207ENST00000436724 NFXL1Q6ZNB6 911 aa24.77■■□□□ 1.56
PTPRF-207ENST00000436724 CNKSR1Q969H4 720 aa24.77■■□□□ 1.56
PTPRF-207ENST00000436724 DBNDD1Q9H9R9 158 aa24.77■■□□□ 1.56
PTPRF-207ENST00000436724 MCM9Q9NXL9 1143 aa24.77■■□□□ 1.56
PTPRF-207ENST00000436724 DDX49Q9Y6V7 483 aaKnown RBP24.77■■□□□ 1.56
PTPRF-207ENST00000436724 BAG3O95817 575 aa24.77■■□□□ 1.56
PTPRF-207ENST00000436724 LDHCP07864 332 aa24.77■■□□□ 1.56
PTPRF-207ENST00000436724 USP17L8P0C7I0 530 aa24.77■■□□□ 1.56
PTPRF-207ENST00000436724 BTDP43251 543 aa24.77■■□□□ 1.56
PTPRF-207ENST00000436724 CERS5Q8N5B7 392 aa24.77■■□□□ 1.56
PTPRF-207ENST00000436724 KCNQ5Q9NR82 932 aa24.77■■□□□ 1.56
PTPRF-207ENST00000436724 F8W031 263 aaPredicted RBP24.76■■□□□ 1.55
PTPRF-207ENST00000436724 USP5P45974 858 aa24.76■■□□□ 1.55
PTPRF-207ENST00000436724 MICU3Q86XE3 530 aa24.76■■□□□ 1.55
PTPRF-207ENST00000436724 CCDC144CPQ8IYA2 1237 aa24.76■■□□□ 1.55
PTPRF-207ENST00000436724 MKRN1Q9UHC7 482 aaKnown RBP24.76■■□□□ 1.55
PTPRF-207ENST00000436724 CNPY2Q9Y2B0 182 aa24.76■■□□□ 1.55
PTPRF-207ENST00000436724 G3V3G9 751 aa24.76■■□□□ 1.55
PTPRF-207ENST00000436724 IGSF3O75054 1194 aa24.76■■□□□ 1.55
PTPRF-207ENST00000436724 PPP4CP60510 307 aa24.76■■□□□ 1.55
PTPRF-207ENST00000436724 SKOR2Q2VWA4 1001 aaPredicted RBP24.76■■□□□ 1.55
PTPRF-207ENST00000436724 DCAF8Q5TAQ9 597 aa24.76■■□□□ 1.55
PTPRF-207ENST00000436724 TGFBRAP1Q8WUH2 860 aa24.76■■□□□ 1.55
PTPRF-207ENST00000436724 C7orf43Q8WVR3 580 aa24.76■■□□□ 1.55
PTPRF-207ENST00000436724 FDPSP14324 419 aaKnown RBP24.75■■□□□ 1.55
PTPRF-207ENST00000436724 LIFRP42702 1097 aa24.75■■□□□ 1.55
PTPRF-207ENST00000436724 FAM173BQ6P4H8 233 aa24.75■■□□□ 1.55
PTPRF-207ENST00000436724 SGMS1Q86VZ5 419 aa24.75■■□□□ 1.55
PTPRF-207ENST00000436724 ESR2Q92731 530 aa24.75■■□□□ 1.55
PTPRF-207ENST00000436724 NOL10Q9BSC4 688 aaKnown RBP24.75■■□□□ 1.55
PTPRF-207ENST00000436724 ADD1P35611 737 aaKnown RBP24.74■■□□□ 1.55
PTPRF-207ENST00000436724 HMGN5P82970 282 aaKnown RBP24.74■■□□□ 1.55
PTPRF-207ENST00000436724 EYA3Q99504 573 aa24.74■■□□□ 1.55
PTPRF-207ENST00000436724 ARPP21Q9UBL0 812 aaPredicted RBP24.74■■□□□ 1.55
PTPRF-207ENST00000436724 C10orf71Q711Q0 1435 aa24.74■■□□□ 1.55
PTPRF-207ENST00000436724 RANBP6O60518 1105 aaKnown RBP24.74■■□□□ 1.55
PTPRF-207ENST00000436724 METAP2P50579 478 aaKnown RBP eCLIP24.74■■□□□ 1.55
PTPRF-207ENST00000436724 DNM1Q05193 864 aaKnown RBP24.74■■□□□ 1.55
PTPRF-207ENST00000436724 FAM43AQ8N2R8 423 aa24.74■■□□□ 1.55
PTPRF-207ENST00000436724 GPR75-ASB3A0A0A6YYF3 556 aa24.73■■□□□ 1.55
PTPRF-207ENST00000436724 CDC27P30260 824 aa24.73■■□□□ 1.55
PTPRF-207ENST00000436724 LAMB1P07942 1786 aa24.73■■□□□ 1.55
PTPRF-207ENST00000436724 CPLX1O14810 134 aa24.73■■□□□ 1.55
PTPRF-207ENST00000436724 FGRP09769 529 aa24.73■■□□□ 1.55
PTPRF-207ENST00000436724 NCLP19338 710 aaKnown RBP24.73■■□□□ 1.55
PTPRF-207ENST00000436724 WTAPQ15007 396 aa24.73■■□□□ 1.55
PTPRF-207ENST00000436724 SBK1Q52WX2 424 aa24.73■■□□□ 1.55
PTPRF-207ENST00000436724 MAPKAPK5Q8IW41 473 aa24.73■■□□□ 1.55
PTPRF-207ENST00000436724 GPT2Q8TD30 523 aa24.73■■□□□ 1.55
PTPRF-207ENST00000436724 PANK2Q9BZ23 570 aa24.73■■□□□ 1.55
PTPRF-207ENST00000436724 ATP6V1DQ9Y5K8 247 aa24.73■■□□□ 1.55
PTPRF-207ENST00000436724 CCDC69A6NI79 296 aa24.72■■□□□ 1.55
PTPRF-207ENST00000436724 H3BQV1 296 aa24.72■■□□□ 1.55
PTPRF-207ENST00000436724 ZBTB43O43298 467 aa24.72■■□□□ 1.55
PTPRF-207ENST00000436724 C21orf2O43822 256 aa24.72■■□□□ 1.55
PTPRF-207ENST00000436724 DHX16O60231 1041 aaKnown RBP24.72■■□□□ 1.55
PTPRF-207ENST00000436724 SART3Q15020 963 aaKnown RBP24.72■■□□□ 1.55
PTPRF-207ENST00000436724 KLHL40Q2TBA0 621 aa24.72■■□□□ 1.55
PTPRF-207ENST00000436724 IFFO2Q5TF58 517 aa24.72■■□□□ 1.55
PTPRF-207ENST00000436724 USP48Q86UV5 1035 aa24.72■■□□□ 1.55
PTPRF-207ENST00000436724 UBAC1Q9BSL1 405 aa24.72■■□□□ 1.55
PTPRF-207ENST00000436724 SLC12A7Q9Y666 1083 aa24.72■■□□□ 1.55
PTPRF-207ENST00000436724 ZBTB7AO95365 584 aa24.71■■□□□ 1.55
PTPRF-207ENST00000436724 PDIA4P13667 645 aaKnown RBP24.71■■□□□ 1.55
PTPRF-207ENST00000436724 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.71■■□□□ 1.55
PTPRF-207ENST00000436724 TNKSO95271 1327 aa24.71■■□□□ 1.55
PTPRF-207ENST00000436724 ERICH2A1L162 156 aa24.71■■□□□ 1.55
PTPRF-207ENST00000436724 MRE11P49959 708 aa24.71■■□□□ 1.55
PTPRF-207ENST00000436724 SLC16A10Q8TF71 515 aa24.71■■□□□ 1.55
PTPRF-207ENST00000436724 FAM163AQ96GL9 167 aaPredicted RBP24.71■■□□□ 1.55
PTPRF-207ENST00000436724 DAGLAQ9Y4D2 1042 aa24.71■■□□□ 1.55
PTPRF-207ENST00000436724 GAKO14976 1311 aa24.71■■□□□ 1.55
PTPRF-207ENST00000436724 FIBPO43427 364 aa24.7■■□□□ 1.55
PTPRF-207ENST00000436724 RHBDL3P58872 404 aa24.7■■□□□ 1.55
PTPRF-207ENST00000436724 GUCY1B3Q02153 619 aa24.7■■□□□ 1.55
PTPRF-207ENST00000436724 SAP30BPQ9UHR5 308 aaKnown RBP24.7■■□□□ 1.55
PTPRF-207ENST00000436724 TTF2Q9UNY4 1162 aaKnown RBP24.7■■□□□ 1.55
PTPRF-207ENST00000436724 CDK5RAP2Q96SN8 1893 aa24.7■■□□□ 1.55
PTPRF-207ENST00000436724 GADD45BO75293 160 aaPredicted RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms