RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 VPS37DQ86XT2 251 aa8.51□□□□□ -1.05
LSM3P3-201ENST00000436601 KBTBD3Q8NAB2 608 aa8.51□□□□□ -1.05
LSM3P3-201ENST00000436601 FSD1Q9BTV5 496 aa8.51□□□□□ -1.05
LSM3P3-201ENST00000436601 TRIM34Q9BYJ4 488 aa8.51□□□□□ -1.05
LSM3P3-201ENST00000436601 CD209Q9NNX6 404 aa8.51□□□□□ -1.05
LSM3P3-201ENST00000436601 DUOX1Q9NRD9 1551 aa8.51□□□□□ -1.05
LSM3P3-201ENST00000436601 COL1A1P02452 1464 aaPredicted RBP8.51□□□□□ -1.05
LSM3P3-201ENST00000436601 LRRC37AA6NMS7 1700 aa8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 ARHGAP33O14559 1287 aa8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 IL1R1P14778 569 aa8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 GUCA2AQ02747 115 aa8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 SLFNL1Q499Z3 407 aa8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 ZNF804AQ7Z570 1209 aa8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 RTKN2Q8IZC4 609 aa8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 PBXIP1Q96AQ6 731 aa8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 EYA3Q99504 573 aa8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 ZC3H12CQ9C0D7 883 aaKnown RBP8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 COA1Q9GZY4 146 aa8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 IL25Q9H293 177 aa8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 KIAA1551Q9HCM1 1747 aa8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 HMX1Q9NP08 348 aaPredicted RBP8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 DENND2AQ9ULE3 1009 aa8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 PDS5AQ29RF7 1337 aaKnown RBP8.5□□□□□ -1.05
LSM3P3-201ENST00000436601 LTBP1Q14766 1721 aa8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 RNF113AO15541 343 aaKnown RBP8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 NMIQ13287 307 aaPredicted RBP8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 TTF1Q15361 905 aaPredicted RBP8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 SOGA3Q5TF21 947 aa8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 LAPTM4BQ86VI4 370 aa8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 TICAM2Q86XR7 235 aa8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 SUPT20HQ8NEM7 779 aa8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 FAM227BQ96M60 508 aa8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 PSMD1Q99460 953 aa8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 ESYT1Q9BSJ8 1104 aa8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 SYT17Q9BSW7 474 aa8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 BCS1LQ9Y276 419 aa8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 KIF13BQ9NQT8 1826 aa8.49□□□□□ -1.05
LSM3P3-201ENST00000436601 RFX7Q2KHR2 1363 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 SPEF2Q9C093 1822 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 A0A0D9SFI3 127 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 HIP1O00291 1037 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 SGSM2O43147 1006 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 GPR37L1O60883 481 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 FRAT2O75474 233 aaPredicted RBP8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 SOX11P35716 441 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 KIAA2012Q0VF49 1180 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 CHAF1AQ13111 956 aaPredicted RBP8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 AOC3Q16853 763 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 ZMYM1Q5SVZ6 1142 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 CASC1Q6TDU7 716 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 CWC27Q6UX04 472 aaKnown RBP8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 DIAPH3Q9NSV4 1193 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 SEPT9Q9UHD8 586 aaPredicted RBP8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 JAG2Q9Y219 1238 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 ARAP2Q8WZ64 1704 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 SALL1Q9NSC2 1324 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 A0A1B0GUL6 1792 aa8.48□□□□□ -1.05
LSM3P3-201ENST00000436601 SLX4Q8IY92 1834 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 TCRBV5S4A2TA0A5A2 114 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 PATL2C9JE40 543 aaKnown RBP8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 CFAP99D6REC4 459 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 NFKBIEO00221 500 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 IDH1O75874 414 aaKnown RBP8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 ZFYP08048 801 aaPredicted RBP8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 PDE6AP16499 860 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 ADD2P35612 726 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 PSEN2P49810 448 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 MFAP1P55081 439 aaKnown RBP8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 FUT2Q10981 343 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 UBE3CQ15386 1083 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 GRIK5Q16478 980 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 SLC9C2Q5TAH2 1124 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 PODNQ7Z5L7 613 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 WDR66Q8TBY9 1149 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 ZNF384Q8TF68 577 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 HLA-CQ95604 372 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 SEC62Q99442 399 aaKnown RBP8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 VPS33BQ9H267 617 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 DBNDD1Q9H9R9 158 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 KCNQ5Q9NR82 932 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 ZNF277Q9NRM2 450 aaPredicted RBP8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 LRP2BPQ9P2M1 347 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 ABCF2Q9UG63 623 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 FAM205AQ6ZU69 1335 aa8.47□□□□□ -1.05
LSM3P3-201ENST00000436601 DLEC1Q9Y238 1755 aa8.46□□□□□ -1.05
LSM3P3-201ENST00000436601 YDJCA8MPS7 323 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 PPIP5K2O43314 1243 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 ECE2O60344 883 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 CFHP08603 1231 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 PRDX5P30044 214 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 PBX2P40425 430 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 PRELPP51888 382 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 GTF2IP78347 998 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 MAP3K12Q12852 859 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 LRRFIP1Q32MZ4 808 aaKnown RBP8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 MCMDC2Q4G0Z9 681 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 ZSCAN25Q6NSZ9 544 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 ZNF589Q86UQ0 364 aaPredicted RBP8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 MAGEB6Q8N7X4 407 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms