RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 CPA4Q9UI42 421 aa13.61□□□□□ -0.23
SPTLC1P4-201ENST00000435997 HDAC5Q9UQL6 1122 aa13.61□□□□□ -0.23
SPTLC1P4-201ENST00000435997 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.61□□□□□ -0.23
SPTLC1P4-201ENST00000435997 A0A0G2JLL6 359 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1P4-201ENST00000435997 A0A1B0GUL7 405 aa13.6□□□□□ -0.23
SPTLC1P4-201ENST00000435997 PRRT2Q7Z6L0 340 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1P4-201ENST00000435997 ZNF384Q8TF68 577 aa13.6□□□□□ -0.23
SPTLC1P4-201ENST00000435997 DDX4Q9NQI0 724 aaKnown RBP13.6□□□□□ -0.23
SPTLC1P4-201ENST00000435997 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
SPTLC1P4-201ENST00000435997 PTPRAP18433 802 aa13.59□□□□□ -0.23
SPTLC1P4-201ENST00000435997 OSBPP22059 807 aa13.59□□□□□ -0.23
SPTLC1P4-201ENST00000435997 PSMC4P43686 418 aa13.59□□□□□ -0.23
SPTLC1P4-201ENST00000435997 RHBDL3P58872 404 aa13.59□□□□□ -0.23
SPTLC1P4-201ENST00000435997 SLC4A8Q2Y0W8 1093 aa13.59□□□□□ -0.23
SPTLC1P4-201ENST00000435997 SLC45A1Q9Y2W3 748 aa13.59□□□□□ -0.23
SPTLC1P4-201ENST00000435997 COL2A1P02458 1487 aaPredicted RBP13.59□□□□□ -0.23
SPTLC1P4-201ENST00000435997 MROH7-TTC4A0A0A0MT08 1334 aa13.59□□□□□ -0.23
SPTLC1P4-201ENST00000435997 DOCK2Q92608 1830 aa13.58□□□□□ -0.24
SPTLC1P4-201ENST00000435997 GPR75-ASB3A0A0A6YYF3 556 aa13.58□□□□□ -0.24
SPTLC1P4-201ENST00000435997 DDTLA6NHG4 134 aaPredicted RBP13.58□□□□□ -0.24
SPTLC1P4-201ENST00000435997 SRGAP3O43295 1099 aa13.58□□□□□ -0.24
SPTLC1P4-201ENST00000435997 CYP2C8P10632 490 aa13.58□□□□□ -0.24
SPTLC1P4-201ENST00000435997 TIMM10P62072 90 aa13.58□□□□□ -0.24
SPTLC1P4-201ENST00000435997 MVPQ14764 893 aaKnown RBP13.58□□□□□ -0.24
SPTLC1P4-201ENST00000435997 MTFR1Q15390 333 aa13.58□□□□□ -0.24
SPTLC1P4-201ENST00000435997 UBE2Q1Q7Z7E8 422 aa13.58□□□□□ -0.24
SPTLC1P4-201ENST00000435997 DZIP1Q86YF9 867 aaKnown RBP13.58□□□□□ -0.24
SPTLC1P4-201ENST00000435997 XAGE2Q96GT9 111 aa13.58□□□□□ -0.24
SPTLC1P4-201ENST00000435997 AFG3L2Q9Y4W6 797 aa13.58□□□□□ -0.24
SPTLC1P4-201ENST00000435997 MYPNQ86TC9 1320 aa13.58□□□□□ -0.24
SPTLC1P4-201ENST00000435997 CTNND1O60716 968 aaKnown RBP13.57□□□□□ -0.24
SPTLC1P4-201ENST00000435997 GNAI3P08754 354 aa13.57□□□□□ -0.24
SPTLC1P4-201ENST00000435997 SLURP2P0DP57 97 aa13.57□□□□□ -0.24
SPTLC1P4-201ENST00000435997 TRIM27P14373 513 aa13.57□□□□□ -0.24
SPTLC1P4-201ENST00000435997 BTDP43251 543 aa13.57□□□□□ -0.24
SPTLC1P4-201ENST00000435997 MECOMQ03112 1051 aa13.57□□□□□ -0.24
SPTLC1P4-201ENST00000435997 PRKCZQ05513 592 aa13.57□□□□□ -0.24
SPTLC1P4-201ENST00000435997 TFCP2Q12800 502 aa13.57□□□□□ -0.24
SPTLC1P4-201ENST00000435997 SLF2Q8IX21 1173 aa13.57□□□□□ -0.24
SPTLC1P4-201ENST00000435997 PICK1Q9NRD5 415 aa13.57□□□□□ -0.24
SPTLC1P4-201ENST00000435997 AKAP2Q9Y2D5 859 aa13.57□□□□□ -0.24
SPTLC1P4-201ENST00000435997 ZHX2Q9Y6X8 837 aa13.57□□□□□ -0.24
SPTLC1P4-201ENST00000435997 CCER2I3L3R5 266 aa13.56□□□□□ -0.24
SPTLC1P4-201ENST00000435997 TBC1D12O60347 775 aa13.56□□□□□ -0.24
SPTLC1P4-201ENST00000435997 MYCP01106 439 aaPredicted RBP13.56□□□□□ -0.24
SPTLC1P4-201ENST00000435997 HOXD10P28358 340 aa13.56□□□□□ -0.24
SPTLC1P4-201ENST00000435997 ARID4AP29374 1257 aaPredicted RBP13.56□□□□□ -0.24
SPTLC1P4-201ENST00000435997 GRK4P32298 578 aa13.56□□□□□ -0.24
SPTLC1P4-201ENST00000435997 FXR1P51114 621 aaKnown RBP eCLIP13.56□□□□□ -0.24
SPTLC1P4-201ENST00000435997 SPTY2D1Q68D10 685 aaPredicted RBP13.56□□□□□ -0.24
SPTLC1P4-201ENST00000435997 FASTKD5Q7L8L6 764 aaKnown RBP13.56□□□□□ -0.24
SPTLC1P4-201ENST00000435997 HMG20BQ9P0W2 317 aa13.56□□□□□ -0.24
SPTLC1P4-201ENST00000435997 ABCF2Q9UG63 623 aa13.56□□□□□ -0.24
SPTLC1P4-201ENST00000435997 RANBP2P49792 3224 aaKnown RBP13.55□□□□□ -0.24
SPTLC1P4-201ENST00000435997 MAP4K4O95819 1239 aaPredicted RBP13.55□□□□□ -0.24
SPTLC1P4-201ENST00000435997 GJA8P48165 433 aa13.55□□□□□ -0.24
SPTLC1P4-201ENST00000435997 FCGRTP55899 365 aa13.55□□□□□ -0.24
SPTLC1P4-201ENST00000435997 PI16Q6UXB8 463 aa13.55□□□□□ -0.24
SPTLC1P4-201ENST00000435997 NSUN4Q96CB9 384 aaKnown RBP13.55□□□□□ -0.24
SPTLC1P4-201ENST00000435997 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.55□□□□□ -0.24
SPTLC1P4-201ENST00000435997 DOCK1Q14185 1865 aa13.55□□□□□ -0.24
SPTLC1P4-201ENST00000435997 PNMA6EA0A0J9YXQ4 647 aa13.54□□□□□ -0.24
SPTLC1P4-201ENST00000435997 FMNL1O95466 1100 aaPredicted RBP13.54□□□□□ -0.24
SPTLC1P4-201ENST00000435997 GJB1P08034 283 aa13.54□□□□□ -0.24
SPTLC1P4-201ENST00000435997 PICALMQ13492 652 aa13.54□□□□□ -0.24
SPTLC1P4-201ENST00000435997 ATF7IPQ6VMQ6 1270 aa13.54□□□□□ -0.24
SPTLC1P4-201ENST00000435997 ERICH6Q7L0X2 663 aa13.54□□□□□ -0.24
SPTLC1P4-201ENST00000435997 SPATA5Q8NB90 893 aa13.54□□□□□ -0.24
SPTLC1P4-201ENST00000435997 SLAIN1Q8ND83 568 aa13.54□□□□□ -0.24
SPTLC1P4-201ENST00000435997 NKX2-3Q8TAU0 364 aa13.54□□□□□ -0.24
SPTLC1P4-201ENST00000435997 RAET1EQ8TD07 263 aa13.54□□□□□ -0.24
SPTLC1P4-201ENST00000435997 AGTPBP1Q9UPW5 1226 aa13.54□□□□□ -0.24
SPTLC1P4-201ENST00000435997 TNNQ9UQP3 1299 aa13.54□□□□□ -0.24
SPTLC1P4-201ENST00000435997 MYH2Q9UKX2 1941 aa13.53□□□□□ -0.24
SPTLC1P4-201ENST00000435997 ECM2O94769 699 aaPredicted RBP13.53□□□□□ -0.24
SPTLC1P4-201ENST00000435997 CCL5P13501 91 aa13.53□□□□□ -0.24
SPTLC1P4-201ENST00000435997 MCAMP43121 646 aa13.53□□□□□ -0.24
SPTLC1P4-201ENST00000435997 ZSCAN29Q8IWY8 852 aaPredicted RBP13.53□□□□□ -0.24
SPTLC1P4-201ENST00000435997 OSBPL5Q9H0X9 879 aaPredicted RBP13.53□□□□□ -0.24
SPTLC1P4-201ENST00000435997 GABRQQ9UN88 632 aa13.53□□□□□ -0.24
SPTLC1P4-201ENST00000435997 COLQQ9Y215 455 aaPredicted RBP13.53□□□□□ -0.24
SPTLC1P4-201ENST00000435997 PHIPQ8WWQ0 1821 aa13.53□□□□□ -0.24
SPTLC1P4-201ENST00000435997 PTPRFP10586 1907 aa13.52□□□□□ -0.24
SPTLC1P4-201ENST00000435997 TRIM75PA6NK02 468 aa13.52□□□□□ -0.25
SPTLC1P4-201ENST00000435997 H0YGN5 161 aa13.52□□□□□ -0.25
SPTLC1P4-201ENST00000435997 GNAI2P04899 355 aa13.52□□□□□ -0.25
SPTLC1P4-201ENST00000435997 IRF5Q13568 498 aa13.52□□□□□ -0.25
SPTLC1P4-201ENST00000435997 FAM110CQ1W6H9 321 aa13.52□□□□□ -0.25
SPTLC1P4-201ENST00000435997 CCDC84Q86UT8 332 aaPredicted RBP13.52□□□□□ -0.25
SPTLC1P4-201ENST00000435997 SZT2Q5T011 3432 aa13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 LAMA3Q16787 3333 aa13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 LOC285556D6RIA3 1793 aa13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 FAM196BA6NMK8 535 aa13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 FLT3LGP49771 235 aa13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 GSTO1P78417 241 aa13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 POLA2Q14181 598 aa13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 RRP1BQ14684 758 aaKnown RBP13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 TREML2Q5T2D2 321 aa13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 GADL1Q6ZQY3 521 aa13.51□□□□□ -0.25
SPTLC1P4-201ENST00000435997 TBC1D9Q6ZT07 1266 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms