RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 TXNDC11Q6PKC3 985 aa6.72□□□□□ -1.33
HMGB1P45-201ENST00000435986 GK5Q6ZS86 529 aa6.72□□□□□ -1.33
HMGB1P45-201ENST00000435986 GRIN3AQ8TCU5 1115 aa6.72□□□□□ -1.33
HMGB1P45-201ENST00000435986 MKL1Q969V6 931 aa6.72□□□□□ -1.33
HMGB1P45-201ENST00000435986 USP26Q9BXU7 913 aa6.72□□□□□ -1.33
HMGB1P45-201ENST00000435986 PICK1Q9NRD5 415 aa6.72□□□□□ -1.33
HMGB1P45-201ENST00000435986 RAD18Q9NS91 495 aa6.72□□□□□ -1.33
HMGB1P45-201ENST00000435986 MRVI1Q9Y6F6 885 aa6.72□□□□□ -1.33
HMGB1P45-201ENST00000435986 KRBA1A5PL33 1030 aa6.71□□□□□ -1.34
HMGB1P45-201ENST00000435986 NCLP19338 710 aaKnown RBP6.71□□□□□ -1.34
HMGB1P45-201ENST00000435986 CRKP46108 304 aa6.71□□□□□ -1.34
HMGB1P45-201ENST00000435986 TRAPPC3LQ5T215 181 aa6.71□□□□□ -1.34
HMGB1P45-201ENST00000435986 PDZD3Q86UT5 571 aa6.71□□□□□ -1.34
HMGB1P45-201ENST00000435986 ALYREFQ86V81 257 aaKnown RBP6.71□□□□□ -1.34
HMGB1P45-201ENST00000435986 ZC3H12CQ9C0D7 883 aaKnown RBP6.71□□□□□ -1.34
HMGB1P45-201ENST00000435986 BRMS1Q9HCU9 246 aa6.71□□□□□ -1.34
HMGB1P45-201ENST00000435986 CD68P34810 354 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 ETFBP38117 255 aa6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 BAG6P46379 1132 aa6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 C8orf86Q6ZUL3 223 aa6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 DMRTC2Q8IXT2 367 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 FAM177A1Q8N128 213 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 FBXO27Q8NI29 283 aa6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 STK35Q8TDR2 534 aa6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 GPBAR1Q8TDU6 330 aa6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 GAL3ST3Q96A11 431 aa6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 EHMT1Q9H9B1 1298 aa6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 ZNRF3Q9ULT6 936 aa6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 PPT2Q9UMR5 302 aa6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 PCDHB14Q9Y5E9 798 aa6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 SLC12A7Q9Y666 1083 aa6.7□□□□□ -1.34
HMGB1P45-201ENST00000435986 K7ELQ4 463 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 ATE1O95260 518 aa6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 NID1P14543 1247 aa6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 GIPRP48546 466 aa6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 RAB33AQ14088 237 aa6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 WIPI1Q5MNZ9 446 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 ADAMTSL4Q6UY14 1074 aa6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 CCDC81Q6ZN84 652 aa6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 LRP10Q7Z4F1 713 aa6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 RBBP8NLQ8NC74 664 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 KLHDC7BQ96G42 594 aa6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 SHDQ96IW2 340 aa6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 CARD10Q9BWT7 1032 aa6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 ACTR10Q9NZ32 417 aa6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 NOP53Q9NZM5 478 aaKnown RBP6.69□□□□□ -1.34
HMGB1P45-201ENST00000435986 TLDC2A0PJX2 215 aa6.68□□□□□ -1.34
HMGB1P45-201ENST00000435986 NLRP12P59046 1061 aa6.68□□□□□ -1.34
HMGB1P45-201ENST00000435986 BMS1Q14692 1282 aaKnown RBP6.68□□□□□ -1.34
HMGB1P45-201ENST00000435986 FXNQ16595 210 aa6.68□□□□□ -1.34
HMGB1P45-201ENST00000435986 EXOSC6Q5RKV6 272 aaKnown RBP6.68□□□□□ -1.34
HMGB1P45-201ENST00000435986 RASIP1Q5U651 963 aa6.68□□□□□ -1.34
HMGB1P45-201ENST00000435986 SRPK1Q96SB4 655 aaKnown RBP6.68□□□□□ -1.34
HMGB1P45-201ENST00000435986 PLVAPQ9BX97 442 aa6.68□□□□□ -1.34
HMGB1P45-201ENST00000435986 CCDC86Q9H6F5 360 aaKnown RBP6.68□□□□□ -1.34
HMGB1P45-201ENST00000435986 SYNGAP1Q96PV0 1343 aa6.68□□□□□ -1.34
HMGB1P45-201ENST00000435986 SMAD7O15105 426 aaKnown RBP6.67□□□□□ -1.34
HMGB1P45-201ENST00000435986 IGHA1P01876 353 aa6.67□□□□□ -1.34
HMGB1P45-201ENST00000435986 PROCP04070 461 aa6.67□□□□□ -1.34
HMGB1P45-201ENST00000435986 SETDB1Q15047 1291 aa6.67□□□□□ -1.34
HMGB1P45-201ENST00000435986 PPP2R5EQ16537 467 aa6.67□□□□□ -1.34
HMGB1P45-201ENST00000435986 DUOXA2Q1HG44 320 aa6.67□□□□□ -1.34
HMGB1P45-201ENST00000435986 TM9SF2Q99805 663 aa6.67□□□□□ -1.34
HMGB1P45-201ENST00000435986 SPOCK3Q9BQ16 436 aa6.67□□□□□ -1.34
HMGB1P45-201ENST00000435986 CYP4F12Q9HCS2 524 aa6.67□□□□□ -1.34
HMGB1P45-201ENST00000435986 CACNA2D2Q9NY47 1150 aa6.67□□□□□ -1.34
HMGB1P45-201ENST00000435986 CDK11AQ9UQ88 783 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P45-201ENST00000435986 GRIN3BO60391 1043 aa6.66□□□□□ -1.34
HMGB1P45-201ENST00000435986 LIG1P18858 919 aa6.66□□□□□ -1.34
HMGB1P45-201ENST00000435986 CLCQ05315 142 aa6.66□□□□□ -1.34
HMGB1P45-201ENST00000435986 IFRD2Q12894 506 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P45-201ENST00000435986 TRIM28Q13263 835 aaKnown RBP6.66□□□□□ -1.34
HMGB1P45-201ENST00000435986 KIF4BQ2VIQ3 1234 aa6.66□□□□□ -1.34
HMGB1P45-201ENST00000435986 NUTM2GQ5VZR2 741 aa6.66□□□□□ -1.34
HMGB1P45-201ENST00000435986 ILDR2Q71H61 639 aa6.66□□□□□ -1.34
HMGB1P45-201ENST00000435986 C19orf47Q8N9M1 422 aaKnown RBP6.66□□□□□ -1.34
HMGB1P45-201ENST00000435986 KCT2Q8NC54 265 aa6.66□□□□□ -1.34
HMGB1P45-201ENST00000435986 HNRNPLLQ8WVV9 542 aaKnown RBP6.66□□□□□ -1.34
HMGB1P45-201ENST00000435986 PLPPR2Q96GM1 343 aa6.66□□□□□ -1.34
HMGB1P45-201ENST00000435986 CADPSQ9ULU8 1353 aa6.66□□□□□ -1.34
HMGB1P45-201ENST00000435986 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 LOC100289279A0A1B0GTE1 492 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 KLF4O43474 513 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 HTR3BO95264 441 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 PLCG1P19174 1290 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 CASP7P55210 303 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 CHMP4BP1P59074 171 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 ETF1P62495 437 aaKnown RBP6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 ID3Q02535 119 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 PTPN11Q06124 597 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 PRRT3Q5FWE3 981 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 HGSNATQ68CP4 663 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 GIMAP6Q6P9H5 292 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 CDC37L1Q7L3B6 337 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 FBXO11Q86XK2 927 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 RUSC1Q9BVN2 902 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 KRTAP4-6Q9BYQ5 205 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 RNF208Q9H0X6 261 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 ATXN3LQ9H3M9 355 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 GMIPQ9P107 970 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms