RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 MRC1P22897 1456 aa18.01■□□□□ 0.47
SCARF1-203ENST00000434376 WDHD1O75717 1129 aaPredicted RBP18■□□□□ 0.47
SCARF1-203ENST00000434376 NTSR2O95665 410 aa18■□□□□ 0.47
SCARF1-203ENST00000434376 SSRP1Q08945 709 aaKnown RBP18■□□□□ 0.47
SCARF1-203ENST00000434376 PNOCQ13519 176 aa18■□□□□ 0.47
SCARF1-203ENST00000434376 AKNAD1Q5T1N1 836 aa18■□□□□ 0.47
SCARF1-203ENST00000434376 OXER1Q8TDS5 423 aa18■□□□□ 0.47
SCARF1-203ENST00000434376 CABP5Q9NP86 173 aa18■□□□□ 0.47
SCARF1-203ENST00000434376 MROH5Q6ZUA9 1318 aa18■□□□□ 0.47
SCARF1-203ENST00000434376 RTN1Q16799 776 aa18■□□□□ 0.47
SCARF1-203ENST00000434376 FAM177A1Q8N128 213 aaPredicted RBP18■□□□□ 0.47
SCARF1-203ENST00000434376 SH2B2O14492 632 aaPredicted RBP18■□□□□ 0.47
SCARF1-203ENST00000434376 CCDC144BQ3MJ40 725 aa18■□□□□ 0.47
SCARF1-203ENST00000434376 ANO1Q5XXA6 986 aa18■□□□□ 0.47
SCARF1-203ENST00000434376 NLRP3Q96P20 1036 aa18■□□□□ 0.47
SCARF1-203ENST00000434376 LLPHQ9BRT6 129 aaKnown RBP18■□□□□ 0.47
SCARF1-203ENST00000434376 CGNQ9P2M7 1197 aaKnown RBP18■□□□□ 0.47
SCARF1-203ENST00000434376 SLC3A2P08195 630 aaKnown RBP17.99■□□□□ 0.47
SCARF1-203ENST00000434376 KIF23Q02241 960 aaPredicted RBP17.99■□□□□ 0.47
SCARF1-203ENST00000434376 SART3Q15020 963 aaKnown RBP17.99■□□□□ 0.47
SCARF1-203ENST00000434376 V9GY48 417 aaPredicted RBP17.99■□□□□ 0.47
SCARF1-203ENST00000434376 ZNF202O95125 648 aa17.99■□□□□ 0.47
SCARF1-203ENST00000434376 FAM160A1Q05DH4 1040 aa17.99■□□□□ 0.47
SCARF1-203ENST00000434376 UBE3CQ15386 1083 aa17.99■□□□□ 0.47
SCARF1-203ENST00000434376 TPD52L1Q16890 204 aaPredicted RBP17.99■□□□□ 0.47
SCARF1-203ENST00000434376 NOM1Q5C9Z4 860 aaKnown RBP17.99■□□□□ 0.47
SCARF1-203ENST00000434376 DIS3L2Q8IYB7 885 aaKnown RBP17.99■□□□□ 0.47
SCARF1-203ENST00000434376 LINC00301Q8NCQ3 95 aa17.99■□□□□ 0.47
SCARF1-203ENST00000434376 PLA2G12BQ9BX93 195 aa17.99■□□□□ 0.47
SCARF1-203ENST00000434376 RCOR1Q9UKL0 485 aa17.99■□□□□ 0.47
SCARF1-203ENST00000434376 ERVV-1B6SEH8 477 aa17.98■□□□□ 0.47
SCARF1-203ENST00000434376 RFC4P35249 363 aa17.98■□□□□ 0.47
SCARF1-203ENST00000434376 MINPP1Q9UNW1 487 aa17.98■□□□□ 0.47
SCARF1-203ENST00000434376 CDHR2Q9BYE9 1310 aa17.98■□□□□ 0.47
SCARF1-203ENST00000434376 PFKFB1P16118 471 aa17.98■□□□□ 0.47
SCARF1-203ENST00000434376 AFMP43652 599 aa17.98■□□□□ 0.47
SCARF1-203ENST00000434376 GNL3LQ9NVN8 582 aaKnown RBP17.98■□□□□ 0.47
SCARF1-203ENST00000434376 PPARAQ07869 468 aa17.98■□□□□ 0.47
SCARF1-203ENST00000434376 KIAA1524Q8TCG1 905 aa17.98■□□□□ 0.47
SCARF1-203ENST00000434376 LY9Q9HBG7 655 aa17.98■□□□□ 0.47
SCARF1-203ENST00000434376 TUBGCP6Q96RT7 1819 aa17.98■□□□□ 0.47
SCARF1-203ENST00000434376 CDC25AP30304 524 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 SYKP43405 635 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 RPS8P62241 208 aaKnown RBP17.97■□□□□ 0.47
SCARF1-203ENST00000434376 SAFBQ15424 915 aaKnown RBP eCLIP17.97■□□□□ 0.47
SCARF1-203ENST00000434376 TRIM22Q8IYM9 498 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 DYNLL2Q96FJ2 89 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 PLIN2Q99541 437 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 USP21Q9UK80 565 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 TNKSO95271 1327 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 SNW1Q13573 536 aaKnown RBP17.97■□□□□ 0.47
SCARF1-203ENST00000434376 DZIP1Q86YF9 867 aaKnown RBP17.97■□□□□ 0.47
SCARF1-203ENST00000434376 VAT1LQ9HCJ6 419 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 MCM9Q9NXL9 1143 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 RIMBP2O15034 1052 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 PLEKHA8P1O95397 391 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 TNNT1P13805 278 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 USP49Q70CQ1 688 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 RASGRP2Q7LDG7 609 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 TRMT44Q8IYL2 757 aaKnown RBP17.97■□□□□ 0.47
SCARF1-203ENST00000434376 SLC44A5Q8NCS7 719 aa17.97■□□□□ 0.47
SCARF1-203ENST00000434376 ELP1O95163 1332 aa17.96■□□□□ 0.47
SCARF1-203ENST00000434376 SIPA1L3O60292 1781 aaPredicted RBP17.96■□□□□ 0.47
SCARF1-203ENST00000434376 FAM196AQ6ZSG2 479 aa17.96■□□□□ 0.47
SCARF1-203ENST00000434376 CEP57L1Q8IYX8 460 aa17.96■□□□□ 0.47
SCARF1-203ENST00000434376 IGDCC4Q8TDY8 1250 aa17.96■□□□□ 0.47
SCARF1-203ENST00000434376 STX8Q9UNK0 236 aa17.96■□□□□ 0.47
SCARF1-203ENST00000434376 TCRBV5S4A2TA0A5A2 114 aa17.96■□□□□ 0.47
SCARF1-203ENST00000434376 ATP1A3P13637 1013 aa17.96■□□□□ 0.47
SCARF1-203ENST00000434376 FGFR2P21802 821 aa17.96■□□□□ 0.47
SCARF1-203ENST00000434376 NFIXQ14938 502 aa17.96■□□□□ 0.47
SCARF1-203ENST00000434376 CACTINQ8WUQ7 758 aaKnown RBP17.96■□□□□ 0.47
SCARF1-203ENST00000434376 USP17L8P0C7I0 530 aa17.95■□□□□ 0.46
SCARF1-203ENST00000434376 VEGFAP15692 232 aaPredicted RBP17.95■□□□□ 0.46
SCARF1-203ENST00000434376 ZNF75DP51815 510 aa17.95■□□□□ 0.46
SCARF1-203ENST00000434376 STX1AQ16623 288 aa17.95■□□□□ 0.46
SCARF1-203ENST00000434376 EEF2KMTQ96G04 330 aa17.95■□□□□ 0.46
SCARF1-203ENST00000434376 FAM84BQ96KN1 310 aaPredicted RBP17.95■□□□□ 0.46
SCARF1-203ENST00000434376 IFNKQ9P0W0 207 aa17.95■□□□□ 0.46
SCARF1-203ENST00000434376 RTCBQ9Y3I0 505 aaKnown RBP17.95■□□□□ 0.46
SCARF1-203ENST00000434376 USP54Q70EL1 1684 aa17.95■□□□□ 0.46
SCARF1-203ENST00000434376 STX17P56962 302 aa17.95■□□□□ 0.46
SCARF1-203ENST00000434376 TMC6Q7Z403 805 aa17.95■□□□□ 0.46
SCARF1-203ENST00000434376 MROH7-TTC4A0A0A0MT08 1334 aa17.95■□□□□ 0.46
SCARF1-203ENST00000434376 TSPY2A6NKD2 308 aa17.95■□□□□ 0.46
SCARF1-203ENST00000434376 ARID4AP29374 1257 aaPredicted RBP17.95■□□□□ 0.46
SCARF1-203ENST00000434376 PARP10Q53GL7 1025 aa17.95■□□□□ 0.46
SCARF1-203ENST00000434376 IFIT1BQ5T764 474 aaKnown RBP17.95■□□□□ 0.46
SCARF1-203ENST00000434376 ZNF654Q8IZM8 581 aa17.95■□□□□ 0.46
SCARF1-203ENST00000434376 CNNM3Q8NE01 707 aa17.95■□□□□ 0.46
SCARF1-203ENST00000434376 TOM1O60784 492 aa17.94■□□□□ 0.46
SCARF1-203ENST00000434376 USP5P45974 858 aa17.94■□□□□ 0.46
SCARF1-203ENST00000434376 EIF6P56537 245 aaKnown RBP17.94■□□□□ 0.46
SCARF1-203ENST00000434376 ZNF174Q15697 407 aa17.94■□□□□ 0.46
SCARF1-203ENST00000434376 RASSF8Q8NHQ8 419 aa17.94■□□□□ 0.46
SCARF1-203ENST00000434376 RASGRP4Q8TDF6 673 aa17.94■□□□□ 0.46
SCARF1-203ENST00000434376 PCDHB6Q9Y5E3 794 aa17.94■□□□□ 0.46
SCARF1-203ENST00000434376 ERICH4A6NGS2 130 aa17.94■□□□□ 0.46
SCARF1-203ENST00000434376 GOLGA8HP0CJ92 632 aa17.94■□□□□ 0.46
SCARF1-203ENST00000434376 OLFM4Q6UX06 510 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms