RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SHDQ96IW2 340 aa8.8□□□□□ -1
USP54-206ENST00000433394 CCDC86Q9H6F5 360 aaKnown RBP8.8□□□□□ -1
USP54-206ENST00000433394 EHMT1Q9H9B1 1298 aa8.8□□□□□ -1
USP54-206ENST00000433394 SMAD7O15105 426 aaKnown RBP8.79□□□□□ -1
USP54-206ENST00000433394 GRIN3BO60391 1043 aa8.79□□□□□ -1
USP54-206ENST00000433394 SLURP2P0DP57 97 aa8.79□□□□□ -1
USP54-206ENST00000433394 PPP2R5EQ16537 467 aa8.79□□□□□ -1
USP54-206ENST00000433394 C8orf86Q6ZUL3 223 aa8.79□□□□□ -1
USP54-206ENST00000433394 STK17AQ9UEE5 414 aa8.79□□□□□ -1
USP54-206ENST00000433394 SLC12A7Q9Y666 1083 aa8.79□□□□□ -1
USP54-206ENST00000433394 TLDC2A0PJX2 215 aa8.78□□□□□ -1
USP54-206ENST00000433394 ATE1O95260 518 aa8.78□□□□□ -1
USP54-206ENST00000433394 CLCQ05315 142 aa8.78□□□□□ -1
USP54-206ENST00000433394 SETDB1Q15047 1291 aa8.78□□□□□ -1
USP54-206ENST00000433394 FXNQ16595 210 aa8.78□□□□□ -1
USP54-206ENST00000433394 HGSNATQ68CP4 663 aa8.78□□□□□ -1
USP54-206ENST00000433394 GIMAP6Q6P9H5 292 aa8.78□□□□□ -1
USP54-206ENST00000433394 RBBP8NLQ8NC74 664 aaPredicted RBP8.78□□□□□ -1
USP54-206ENST00000433394 HNRNPLLQ8WVV9 542 aaKnown RBP8.78□□□□□ -1
USP54-206ENST00000433394 PLPPR2Q96GM1 343 aa8.78□□□□□ -1
USP54-206ENST00000433394 CDK11AQ9UQ88 783 aaPredicted RBP8.78□□□□□ -1
USP54-206ENST00000433394 LIG1P18858 919 aa8.77□□□□□ -1.01
USP54-206ENST00000433394 PLCG1P19174 1290 aa8.77□□□□□ -1.01
USP54-206ENST00000433394 PTPN11Q06124 597 aaPredicted RBP8.77□□□□□ -1.01
USP54-206ENST00000433394 IFRD2Q12894 506 aaPredicted RBP8.77□□□□□ -1.01
USP54-206ENST00000433394 DUOXA2Q1HG44 320 aa8.77□□□□□ -1.01
USP54-206ENST00000433394 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.77□□□□□ -1.01
USP54-206ENST00000433394 C1orf229Q6ZS94 237 aaPredicted RBP8.77□□□□□ -1.01
USP54-206ENST00000433394 LRP10Q7Z4F1 713 aa8.77□□□□□ -1.01
USP54-206ENST00000433394 TM9SF2Q99805 663 aa8.77□□□□□ -1.01
USP54-206ENST00000433394 CACNA2D2Q9NY47 1150 aa8.77□□□□□ -1.01
USP54-206ENST00000433394 LOC100289279A0A1B0GTE1 492 aa8.76□□□□□ -1.01
USP54-206ENST00000433394 PRAMEF27A3QJZ7 478 aa8.76□□□□□ -1.01
USP54-206ENST00000433394 KLF4O43474 513 aa8.76□□□□□ -1.01
USP54-206ENST00000433394 CELA2BP08218 269 aaPredicted RBP8.76□□□□□ -1.01
USP54-206ENST00000433394 ETF1P62495 437 aaKnown RBP8.76□□□□□ -1.01
USP54-206ENST00000433394 KRT76Q01546 638 aa8.76□□□□□ -1.01
USP54-206ENST00000433394 KIF4BQ2VIQ3 1234 aa8.76□□□□□ -1.01
USP54-206ENST00000433394 EXOSC6Q5RKV6 272 aaKnown RBP8.76□□□□□ -1.01
USP54-206ENST00000433394 CCDC85CA6NKD9 419 aa8.75□□□□□ -1.01
USP54-206ENST00000433394 SHISA8B8ZZ34 492 aa8.75□□□□□ -1.01
USP54-206ENST00000433394 HTR3BO95264 441 aa8.75□□□□□ -1.01
USP54-206ENST00000433394 NID1P14543 1247 aa8.75□□□□□ -1.01
USP54-206ENST00000433394 NUTM2GQ5VZR2 741 aa8.75□□□□□ -1.01
USP54-206ENST00000433394 LARP1BQ659C4 914 aaKnown RBP8.75□□□□□ -1.01
USP54-206ENST00000433394 LRFN4Q6PJG9 635 aa8.75□□□□□ -1.01
USP54-206ENST00000433394 MPRIPQ6WCQ1 1025 aa8.75□□□□□ -1.01
USP54-206ENST00000433394 LSRQ86X29 649 aaPredicted RBP8.75□□□□□ -1.01
USP54-206ENST00000433394 C19orf47Q8N9M1 422 aaKnown RBP8.75□□□□□ -1.01
USP54-206ENST00000433394 NRSN2Q9GZP1 204 aa8.75□□□□□ -1.01
USP54-206ENST00000433394 CYP4F12Q9HCS2 524 aa8.75□□□□□ -1.01
USP54-206ENST00000433394 GMIPQ9P107 970 aa8.75□□□□□ -1.01
USP54-206ENST00000433394 SYNGAP1Q96PV0 1343 aa8.75□□□□□ -1.01
USP54-206ENST00000433394 DCDC2CA8MYV0 355 aa8.74□□□□□ -1.01
USP54-206ENST00000433394 AOC2O75106 756 aa8.74□□□□□ -1.01
USP54-206ENST00000433394 ECEL1O95672 775 aa8.74□□□□□ -1.01
USP54-206ENST00000433394 CHMP4BP1P59074 171 aa8.74□□□□□ -1.01
USP54-206ENST00000433394 ID3Q02535 119 aa8.74□□□□□ -1.01
USP54-206ENST00000433394 SERINC3Q13530 473 aa8.74□□□□□ -1.01
USP54-206ENST00000433394 SVOPQ8N4V2 548 aa8.74□□□□□ -1.01
USP54-206ENST00000433394 TMEM40Q8WWA1 233 aa8.74□□□□□ -1.01
USP54-206ENST00000433394 DEPDC7Q96QD5 511 aa8.74□□□□□ -1.01
USP54-206ENST00000433394 RUSC1Q9BVN2 902 aa8.74□□□□□ -1.01
USP54-206ENST00000433394 REV1Q9UBZ9 1251 aa8.74□□□□□ -1.01
USP54-206ENST00000433394 ADAM30Q9UKF2 790 aa8.74□□□□□ -1.01
USP54-206ENST00000433394 POLR3KQ9Y2Y1 108 aaPredicted RBP8.74□□□□□ -1.01
USP54-206ENST00000433394 PRR36Q9H6K5 1346 aa8.74□□□□□ -1.01
USP54-206ENST00000433394 GFRA2O00451 464 aa8.73□□□□□ -1.01
USP54-206ENST00000433394 ZNF862O60290 1169 aa8.73□□□□□ -1.01
USP54-206ENST00000433394 PGRP06401 933 aa8.73□□□□□ -1.01
USP54-206ENST00000433394 YARSP54577 528 aaKnown RBP8.73□□□□□ -1.01
USP54-206ENST00000433394 CASP7P55210 303 aa8.73□□□□□ -1.01
USP54-206ENST00000433394 TRIM28Q13263 835 aaKnown RBP8.73□□□□□ -1.01
USP54-206ENST00000433394 INPP5AQ14642 412 aa8.73□□□□□ -1.01
USP54-206ENST00000433394 ZNF746Q6NUN9 644 aaPredicted RBP8.73□□□□□ -1.01
USP54-206ENST00000433394 CDC37L1Q7L3B6 337 aa8.73□□□□□ -1.01
USP54-206ENST00000433394 ZSCAN1Q8NBB4 408 aa8.73□□□□□ -1.01
USP54-206ENST00000433394 KCT2Q8NC54 265 aa8.73□□□□□ -1.01
USP54-206ENST00000433394 GALNT11Q8NCW6 608 aa8.73□□□□□ -1.01
USP54-206ENST00000433394 RNF208Q9H0X6 261 aa8.73□□□□□ -1.01
USP54-206ENST00000433394 ATXN3LQ9H3M9 355 aa8.73□□□□□ -1.01
USP54-206ENST00000433394 PIF1Q9H611 641 aa8.73□□□□□ -1.01
USP54-206ENST00000433394 CADPSQ9ULU8 1353 aa8.73□□□□□ -1.01
USP54-206ENST00000433394 DDAH1O94760 285 aa8.72□□□□□ -1.01
USP54-206ENST00000433394 HSP90B1P14625 803 aaKnown RBP8.72□□□□□ -1.01
USP54-206ENST00000433394 GUCY2CP25092 1073 aa8.72□□□□□ -1.01
USP54-206ENST00000433394 DGKGP49619 791 aa8.72□□□□□ -1.01
USP54-206ENST00000433394 ERVK-24P63145 666 aa8.72□□□□□ -1.01
USP54-206ENST00000433394 PRRT3Q5FWE3 981 aa8.72□□□□□ -1.01
USP54-206ENST00000433394 AKAP4Q5JQC9 854 aa8.72□□□□□ -1.01
USP54-206ENST00000433394 SDE2Q6IQ49 451 aa8.72□□□□□ -1.01
USP54-206ENST00000433394 LYPD4Q6UWN0 246 aa8.72□□□□□ -1.01
USP54-206ENST00000433394 C12orf40Q86WS4 652 aa8.72□□□□□ -1.01
USP54-206ENST00000433394 FBXO11Q86XK2 927 aa8.72□□□□□ -1.01
USP54-206ENST00000433394 WDR18Q9BV38 432 aa8.72□□□□□ -1.01
USP54-206ENST00000433394 CCDC113Q9H0I3 377 aa8.72□□□□□ -1.01
USP54-206ENST00000433394 PIDD1Q9HB75 910 aa8.72□□□□□ -1.01
USP54-206ENST00000433394 MEIS3P2A8K0S8 358 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 FANCGO15287 622 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 DDX3YO15523 660 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms