RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 LIG1P18858 919 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 PRDX5P30044 214 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 ALX1Q15699 326 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 AKNAD1Q5T1N1 836 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 NAA16Q6N069 864 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-212ENST00000432645 FBXO33Q7Z6M2 555 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 CERS3Q8IU89 383 aa9.72□□□□□ -0.85
HDAC9-212ENST00000432645 RGL2O15211 777 aa9.71□□□□□ -0.85
HDAC9-212ENST00000432645 DHX16O60231 1041 aaKnown RBP9.71□□□□□ -0.85
HDAC9-212ENST00000432645 GYS1P13807 737 aa9.71□□□□□ -0.85
HDAC9-212ENST00000432645 METAP2P50579 478 aaKnown RBP eCLIP9.71□□□□□ -0.85
HDAC9-212ENST00000432645 PRR5LQ6MZQ0 368 aa9.71□□□□□ -0.85
HDAC9-212ENST00000432645 IGDCC4Q8TDY8 1250 aa9.71□□□□□ -0.85
HDAC9-212ENST00000432645 PHKBQ93100 1093 aa9.71□□□□□ -0.85
HDAC9-212ENST00000432645 AIFM3Q96NN9 605 aa9.71□□□□□ -0.85
HDAC9-212ENST00000432645 ANKRD2Q9GZV1 360 aa9.71□□□□□ -0.85
HDAC9-212ENST00000432645 ZSCAN16Q9H4T2 348 aaPredicted RBP9.71□□□□□ -0.85
HDAC9-212ENST00000432645 PNPLA7Q6ZV29 1317 aa9.71□□□□□ -0.85
HDAC9-212ENST00000432645 LETM1O95202 739 aaPredicted RBP9.71□□□□□ -0.85
HDAC9-212ENST00000432645 POLR3DP05423 398 aaPredicted RBP9.71□□□□□ -0.85
HDAC9-212ENST00000432645 GNAT2P19087 354 aa9.71□□□□□ -0.85
HDAC9-212ENST00000432645 CDC27P30260 824 aa9.71□□□□□ -0.85
HDAC9-212ENST00000432645 SLC4A8Q2Y0W8 1093 aa9.71□□□□□ -0.85
HDAC9-212ENST00000432645 APOA5Q6Q788 366 aa9.71□□□□□ -0.85
HDAC9-212ENST00000432645 C4BP0C0L5 1744 aa9.71□□□□□ -0.86
HDAC9-212ENST00000432645 MECOMQ03112 1051 aa9.71□□□□□ -0.86
HDAC9-212ENST00000432645 PGBD1Q96JS3 809 aa9.71□□□□□ -0.86
HDAC9-212ENST00000432645 C8orf76Q96K31 380 aa9.71□□□□□ -0.86
HDAC9-212ENST00000432645 RIOK1Q9BRS2 568 aaKnown RBP9.71□□□□□ -0.86
HDAC9-212ENST00000432645 GTPBP4Q9BZE4 634 aaKnown RBP9.71□□□□□ -0.86
HDAC9-212ENST00000432645 LY9Q9HBG7 655 aa9.71□□□□□ -0.86
HDAC9-212ENST00000432645 AATFQ9NY61 560 aaKnown RBP eCLIP9.71□□□□□ -0.86
HDAC9-212ENST00000432645 UBE2Q2LH0YL09 131 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 PRDM1O75626 825 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 EVX2Q03828 476 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 PPARAQ07869 468 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 MTERF4Q7Z6M4 381 aaKnown RBP9.7□□□□□ -0.86
HDAC9-212ENST00000432645 EGFL6Q8IUX8 553 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 CCDC82Q8N4S0 544 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 CEP120Q8N960 986 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 BICD2Q8TD16 824 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 YY1AP1Q9H869 796 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 DACT1Q9NYF0 836 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-212ENST00000432645 ZBTB43O43298 467 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 SERPINB2P05120 415 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 ILDR1Q86SU0 546 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-212ENST00000432645 RPGRQ92834 1020 aaKnown RBP9.7□□□□□ -0.86
HDAC9-212ENST00000432645 NSUN4Q96CB9 384 aaKnown RBP9.7□□□□□ -0.86
HDAC9-212ENST00000432645 TMEM87BQ96K49 555 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 USP28Q96RU2 1077 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 SLC12A7Q9Y666 1083 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 ELP1O95163 1332 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 WDR19Q8NEZ3 1342 aa9.7□□□□□ -0.86
HDAC9-212ENST00000432645 CCDC69A6NI79 296 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 GRAPQ13588 217 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 CMTR1Q8N1G2 835 aaKnown RBP9.69□□□□□ -0.86
HDAC9-212ENST00000432645 PROM2Q8N271 834 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 GRAPLQ8TC17 118 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-212ENST00000432645 KRT23Q9C075 422 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 CFAP45Q9UL16 551 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 GOLGA8AA7E2F4 631 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 NR1I2O75469 434 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 CKAP2LQ8IYA6 745 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 MPNDQ8N594 471 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 STAG1Q8WVM7 1258 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 CHMP4CQ96CF2 233 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 CNNM2Q9H8M5 875 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 GEMIN8Q9NWZ8 242 aaKnown RBP9.69□□□□□ -0.86
HDAC9-212ENST00000432645 ZMYM6O95789 1325 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 CCDC173Q0VFZ6 552 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 NBPF20Q3BBV1 942 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 FBXO18Q8NFZ0 1043 aa9.69□□□□□ -0.86
HDAC9-212ENST00000432645 LY75O60449 1722 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 SBF2Q86WG5 1849 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 TAF1LQ8IZX4 1826 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 DOCK2Q92608 1830 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 USP17L12C9JPN9 530 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 USP17L21D6R901 530 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 TXNRD1Q16881 649 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 CC2D2BQ6DHV5 1058 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 NUP133Q8WUM0 1156 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 TNRC6CQ9HCJ0 1690 aaKnown RBP9.68□□□□□ -0.86
HDAC9-212ENST00000432645 C4AP0C0L4 1744 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 ERICH2A1L162 156 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 RANBP6O60518 1105 aaKnown RBP9.68□□□□□ -0.86
HDAC9-212ENST00000432645 ST5P78524 1137 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 WTAPQ15007 396 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 DZIP1Q86YF9 867 aaKnown RBP9.68□□□□□ -0.86
HDAC9-212ENST00000432645 ALG1Q9BT22 464 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 NUP62CLQ9H1M0 184 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 FAM217BQ9NTX9 383 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-212ENST00000432645 CASZ1Q86V15 1759 aa9.68□□□□□ -0.86
HDAC9-212ENST00000432645 KIF28PB7ZC32 967 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 SEMA3EO15041 775 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 LIFRP42702 1097 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 ME1P48163 572 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 GPSM2P81274 684 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 DDR1Q08345 913 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 SART3Q15020 963 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms