RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 BAG3O95817 575 aa13.22□□□□□ -0.29
SMPD4-205ENST00000431183 SART3Q15020 963 aaKnown RBP13.22□□□□□ -0.29
SMPD4-205ENST00000431183 RAB3GAP1Q15042 981 aa13.22□□□□□ -0.29
SMPD4-205ENST00000431183 USP17L1Q7RTZ2 530 aa13.22□□□□□ -0.29
SMPD4-205ENST00000431183 WDR66Q8TBY9 1149 aa13.22□□□□□ -0.29
SMPD4-205ENST00000431183 GADD45BO75293 160 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-205ENST00000431183 WTAPQ15007 396 aa13.21□□□□□ -0.29
SMPD4-205ENST00000431183 UBR2Q8IWV8 1755 aa13.21□□□□□ -0.29
SMPD4-205ENST00000431183 CAMK4Q16566 473 aa13.21□□□□□ -0.29
SMPD4-205ENST00000431183 AKNAD1Q5T1N1 836 aa13.21□□□□□ -0.29
SMPD4-205ENST00000431183 CRACR2BQ8N4Y2 399 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-205ENST00000431183 ARID3AQ99856 593 aa13.21□□□□□ -0.29
SMPD4-205ENST00000431183 USP40Q9NVE5 1235 aa13.21□□□□□ -0.29
SMPD4-205ENST00000431183 ATP6V0A2Q9Y487 856 aa13.21□□□□□ -0.29
SMPD4-205ENST00000431183 TJP1Q07157 1748 aa13.21□□□□□ -0.29
SMPD4-205ENST00000431183 TCRBV5S4A2TA0A5A2 114 aa13.21□□□□□ -0.3
SMPD4-205ENST00000431183 TCP10L2B9ZVM9 353 aa13.21□□□□□ -0.3
SMPD4-205ENST00000431183 ZNF444Q8N0Y2 327 aaPredicted RBP13.21□□□□□ -0.3
SMPD4-205ENST00000431183 LAMB4A4D0S4 1761 aa13.21□□□□□ -0.3
SMPD4-205ENST00000431183 ZBTB43O43298 467 aa13.2□□□□□ -0.3
SMPD4-205ENST00000431183 PLCD1P51178 756 aa13.2□□□□□ -0.3
SMPD4-205ENST00000431183 AKAP17AQ02040 695 aaKnown RBP13.2□□□□□ -0.3
SMPD4-205ENST00000431183 SPTY2D1Q68D10 685 aaPredicted RBP13.2□□□□□ -0.3
SMPD4-205ENST00000431183 TTLL6Q8N841 843 aa13.2□□□□□ -0.3
SMPD4-205ENST00000431183 TRIM44Q96DX7 344 aaPredicted RBP13.2□□□□□ -0.3
SMPD4-205ENST00000431183 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
SMPD4-205ENST00000431183 TFAP4Q01664 338 aa13.2□□□□□ -0.3
SMPD4-205ENST00000431183 SF3A1Q15459 793 aaKnown RBP13.2□□□□□ -0.3
SMPD4-205ENST00000431183 ZSCAN31Q96LW9 406 aaPredicted RBP13.2□□□□□ -0.3
SMPD4-205ENST00000431183 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
SMPD4-205ENST00000431183 ANTXR2P58335 489 aa13.2□□□□□ -0.3
SMPD4-205ENST00000431183 ST3GAL1Q11201 340 aa13.2□□□□□ -0.3
SMPD4-205ENST00000431183 IKQ13123 557 aaPredicted RBP13.2□□□□□ -0.3
SMPD4-205ENST00000431183 ZRSR1Q15695 479 aaKnown RBP13.2□□□□□ -0.3
SMPD4-205ENST00000431183 ZYXQ15942 572 aaKnown RBP13.2□□□□□ -0.3
SMPD4-205ENST00000431183 BICD2Q8TD16 824 aa13.2□□□□□ -0.3
SMPD4-205ENST00000431183 ECE2O60344 883 aa13.19□□□□□ -0.3
SMPD4-205ENST00000431183 TSPY3P0CV98 308 aa13.19□□□□□ -0.3
SMPD4-205ENST00000431183 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
SMPD4-205ENST00000431183 IFIT1BQ5T764 474 aaKnown RBP13.19□□□□□ -0.3
SMPD4-205ENST00000431183 DCP1AQ9NPI6 582 aaPredicted RBP13.19□□□□□ -0.3
SMPD4-205ENST00000431183 WDR33Q9C0J8 1336 aaKnown RBP13.19□□□□□ -0.3
SMPD4-205ENST00000431183 TULP1O00294 542 aaPredicted RBP13.19□□□□□ -0.3
SMPD4-205ENST00000431183 ECM2O94769 699 aaPredicted RBP13.19□□□□□ -0.3
SMPD4-205ENST00000431183 NBPF3Q9H094 633 aa13.19□□□□□ -0.3
SMPD4-205ENST00000431183 TDRD3Q9H7E2 651 aaKnown RBP13.19□□□□□ -0.3
SMPD4-205ENST00000431183 SH2B1Q9NRF2 756 aaPredicted RBP13.19□□□□□ -0.3
SMPD4-205ENST00000431183 KCNJ14Q9UNX9 436 aa13.19□□□□□ -0.3
SMPD4-205ENST00000431183 PRAMEF18Q5VWM3 479 aa13.19□□□□□ -0.3
SMPD4-205ENST00000431183 IQCA1Q86XH1 822 aa13.19□□□□□ -0.3
SMPD4-205ENST00000431183 ANGEL1Q9UNK9 670 aaKnown RBP13.19□□□□□ -0.3
SMPD4-205ENST00000431183 TNKSO95271 1327 aa13.18□□□□□ -0.3
SMPD4-205ENST00000431183 ESR2Q92731 530 aa13.18□□□□□ -0.3
SMPD4-205ENST00000431183 TACC3Q9Y6A5 838 aa13.18□□□□□ -0.3
SMPD4-205ENST00000431183 PCNTO95613 3336 aa13.18□□□□□ -0.3
SMPD4-205ENST00000431183 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
SMPD4-205ENST00000431183 HMGB1P09429 215 aaKnown RBP13.18□□□□□ -0.3
SMPD4-205ENST00000431183 ZSCAN22P10073 491 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-205ENST00000431183 NFIAQ12857 509 aa13.18□□□□□ -0.3
SMPD4-205ENST00000431183 CTR9Q6PD62 1173 aa13.18□□□□□ -0.3
SMPD4-205ENST00000431183 CPLX2Q6PUV4 134 aaKnown RBP13.18□□□□□ -0.3
SMPD4-205ENST00000431183 USP48Q86UV5 1035 aa13.18□□□□□ -0.3
SMPD4-205ENST00000431183 SP8Q8IXZ3 490 aa13.18□□□□□ -0.3
SMPD4-205ENST00000431183 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMPD4-205ENST00000431183 CNKSR1Q969H4 720 aa13.18□□□□□ -0.3
SMPD4-205ENST00000431183 C8orf76Q96K31 380 aa13.18□□□□□ -0.3
SMPD4-205ENST00000431183 MIGA2Q7L4E1 593 aa13.18□□□□□ -0.3
SMPD4-205ENST00000431183 CERS5Q8N5B7 392 aa13.18□□□□□ -0.3
SMPD4-205ENST00000431183 ERCC4Q92889 916 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-205ENST00000431183 ESPNB1AK53 854 aa13.17□□□□□ -0.3
SMPD4-205ENST00000431183 LDHCP07864 332 aa13.17□□□□□ -0.3
SMPD4-205ENST00000431183 ARHGAP27Q6ZUM4 889 aa13.17□□□□□ -0.3
SMPD4-205ENST00000431183 TDRD7Q8NHU6 1098 aaKnown RBP13.17□□□□□ -0.3
SMPD4-205ENST00000431183 GTF3C6Q969F1 213 aa13.17□□□□□ -0.3
SMPD4-205ENST00000431183 RBM10P98175 930 aaKnown RBP13.17□□□□□ -0.3
SMPD4-205ENST00000431183 CRY2Q49AN0 593 aa13.17□□□□□ -0.3
SMPD4-205ENST00000431183 CRAMP1Q96RY5 1269 aa13.17□□□□□ -0.3
SMPD4-205ENST00000431183 TM6SF1Q9BZW5 370 aa13.17□□□□□ -0.3
SMPD4-205ENST00000431183 SLC3A2P08195 630 aaKnown RBP13.17□□□□□ -0.3
SMPD4-205ENST00000431183 CCDC84Q86UT8 332 aaPredicted RBP13.17□□□□□ -0.3
SMPD4-205ENST00000431183 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
SMPD4-205ENST00000431183 EYA3Q99504 573 aa13.17□□□□□ -0.3
SMPD4-205ENST00000431183 RIOK1Q9BRS2 568 aaKnown RBP13.17□□□□□ -0.3
SMPD4-205ENST00000431183 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
SMPD4-205ENST00000431183 SHTN1A0MZ66 631 aa13.16□□□□□ -0.3
SMPD4-205ENST00000431183 SYCE3A1L190 88 aa13.16□□□□□ -0.3
SMPD4-205ENST00000431183 CDC27P30260 824 aa13.16□□□□□ -0.3
SMPD4-205ENST00000431183 IARSP41252 1262 aaKnown RBP13.16□□□□□ -0.3
SMPD4-205ENST00000431183 TRIM29Q14134 588 aa13.16□□□□□ -0.3
SMPD4-205ENST00000431183 SHROOM1Q2M3G4 852 aaPredicted RBP13.16□□□□□ -0.3
SMPD4-205ENST00000431183 BRWD3Q6RI45 1802 aa13.16□□□□□ -0.3
SMPD4-205ENST00000431183 C4BP0C0L5 1744 aa13.16□□□□□ -0.3
SMPD4-205ENST00000431183 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.16□□□□□ -0.3
SMPD4-205ENST00000431183 F13A1P00488 732 aa13.16□□□□□ -0.3
SMPD4-205ENST00000431183 PDE4BQ07343 736 aa13.16□□□□□ -0.3
SMPD4-205ENST00000431183 ZFPM1Q8IX07 1006 aa13.16□□□□□ -0.3
SMPD4-205ENST00000431183 JDP2Q8WYK2 163 aa13.16□□□□□ -0.3
SMPD4-205ENST00000431183 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
SMPD4-205ENST00000431183 GDF11O95390 407 aa13.15□□□□□ -0.3
SMPD4-205ENST00000431183 MARCKSP29966 332 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms