RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 CTR9Q6PD62 1173 aa19.54■□□□□ 0.72
USHBP1-203ENST00000431146 LRRC37AA6NMS7 1700 aa19.54■□□□□ 0.72
USHBP1-203ENST00000431146 RIMBP2O15034 1052 aa19.53■□□□□ 0.72
USHBP1-203ENST00000431146 PRDM1O75626 825 aa19.53■□□□□ 0.72
USHBP1-203ENST00000431146 CDC27P30260 824 aa19.53■□□□□ 0.72
USHBP1-203ENST00000431146 OTUD7BQ6GQQ9 843 aa19.53■□□□□ 0.72
USHBP1-203ENST00000431146 CRNKL1Q9BZJ0 848 aaKnown RBP19.53■□□□□ 0.72
USHBP1-203ENST00000431146 TAOK2Q9UL54 1235 aa19.53■□□□□ 0.72
USHBP1-203ENST00000431146 LTBP1Q14766 1721 aa19.53■□□□□ 0.72
USHBP1-203ENST00000431146 DHX16O60231 1041 aaKnown RBP19.52■□□□□ 0.72
USHBP1-203ENST00000431146 KRT85P78386 507 aa19.52■□□□□ 0.72
USHBP1-203ENST00000431146 RNF41Q9H4P4 317 aaPredicted RBP19.52■□□□□ 0.72
USHBP1-203ENST00000431146 DCP1AQ9NPI6 582 aaPredicted RBP19.52■□□□□ 0.72
USHBP1-203ENST00000431146 ANAPC4Q9UJX5 808 aa19.52■□□□□ 0.72
USHBP1-203ENST00000431146 KIF3AQ9Y496 699 aa19.52■□□□□ 0.72
USHBP1-203ENST00000431146 ZBTB43O43298 467 aa19.52■□□□□ 0.72
USHBP1-203ENST00000431146 TTC6Q86TZ1 520 aa19.52■□□□□ 0.72
USHBP1-203ENST00000431146 SP8Q8IXZ3 490 aa19.52■□□□□ 0.72
USHBP1-203ENST00000431146 PANK2Q9BZ23 570 aa19.52■□□□□ 0.72
USHBP1-203ENST00000431146 GRPEL1Q9HAV7 217 aa19.52■□□□□ 0.72
USHBP1-203ENST00000431146 GJB4Q9NTQ9 266 aa19.52■□□□□ 0.72
USHBP1-203ENST00000431146 ORC3Q9UBD5 711 aaPredicted RBP19.52■□□□□ 0.72
USHBP1-203ENST00000431146 SYCE3A1L190 88 aa19.51■□□□□ 0.71
USHBP1-203ENST00000431146 CYP2D6P10635 497 aa19.51■□□□□ 0.71
USHBP1-203ENST00000431146 NPR1P16066 1061 aa19.51■□□□□ 0.71
USHBP1-203ENST00000431146 UBE2HP62256 183 aa19.51■□□□□ 0.71
USHBP1-203ENST00000431146 SGMS1Q86VZ5 419 aa19.51■□□□□ 0.71
USHBP1-203ENST00000431146 ATP6V0A2Q9Y487 856 aa19.51■□□□□ 0.71
USHBP1-203ENST00000431146 CCDC69A6NI79 296 aa19.51■□□□□ 0.71
USHBP1-203ENST00000431146 IL1R1P14778 569 aa19.51■□□□□ 0.71
USHBP1-203ENST00000431146 LIFRP42702 1097 aa19.51■□□□□ 0.71
USHBP1-203ENST00000431146 CHMP4CQ96CF2 233 aa19.51■□□□□ 0.71
USHBP1-203ENST00000431146 SLC12A7Q9Y666 1083 aa19.51■□□□□ 0.71
USHBP1-203ENST00000431146 DUOX1Q9NRD9 1551 aa19.5■□□□□ 0.71
USHBP1-203ENST00000431146 MYH15Q9Y2K3 1946 aa19.5■□□□□ 0.71
USHBP1-203ENST00000431146 GOLGA8AA7E2F4 631 aa19.5■□□□□ 0.71
USHBP1-203ENST00000431146 PDE6BP35913 854 aa19.5■□□□□ 0.71
USHBP1-203ENST00000431146 WTAPQ15007 396 aa19.5■□□□□ 0.71
USHBP1-203ENST00000431146 SH3RF3Q8TEJ3 882 aaPredicted RBP19.5■□□□□ 0.71
USHBP1-203ENST00000431146 PHKBQ93100 1093 aa19.5■□□□□ 0.71
USHBP1-203ENST00000431146 KIAA1551Q9HCM1 1747 aa19.5■□□□□ 0.71
USHBP1-203ENST00000431146 RGPD3A6NKT7 1758 aaPredicted RBP19.5■□□□□ 0.71
USHBP1-203ENST00000431146 RGPD4Q7Z3J3 1758 aa19.5■□□□□ 0.71
USHBP1-203ENST00000431146 ZBTB22O15209 634 aa19.49■□□□□ 0.71
USHBP1-203ENST00000431146 RANBP6O60518 1105 aaKnown RBP19.49■□□□□ 0.71
USHBP1-203ENST00000431146 ZNF445P59923 1031 aa19.49■□□□□ 0.71
USHBP1-203ENST00000431146 GIMAP6Q6P9H5 292 aa19.49■□□□□ 0.71
USHBP1-203ENST00000431146 ZNF622Q969S3 477 aaKnown RBP eCLIP19.49■□□□□ 0.71
USHBP1-203ENST00000431146 CAMKK2Q96RR4 588 aa19.49■□□□□ 0.71
USHBP1-203ENST00000431146 LAMB1P07942 1786 aa19.49■□□□□ 0.71
USHBP1-203ENST00000431146 MRE11P49959 708 aa19.49■□□□□ 0.71
USHBP1-203ENST00000431146 CEBPZQ03701 1054 aaKnown RBP19.49■□□□□ 0.71
USHBP1-203ENST00000431146 SART3Q15020 963 aaKnown RBP19.49■□□□□ 0.71
USHBP1-203ENST00000431146 SLC15A2Q16348 729 aa19.49■□□□□ 0.71
USHBP1-203ENST00000431146 CSPP1Q1MSJ5 1256 aa19.49■□□□□ 0.71
USHBP1-203ENST00000431146 ESR2Q92731 530 aa19.49■□□□□ 0.71
USHBP1-203ENST00000431146 AIFM3Q96NN9 605 aa19.49■□□□□ 0.71
USHBP1-203ENST00000431146 FAM217BQ9NTX9 383 aaPredicted RBP19.49■□□□□ 0.71
USHBP1-203ENST00000431146 ERICH2A1L162 156 aa19.48■□□□□ 0.71
USHBP1-203ENST00000431146 USP17L8P0C7I0 530 aa19.48■□□□□ 0.71
USHBP1-203ENST00000431146 MFSD14BQ5SR56 506 aa19.48■□□□□ 0.71
USHBP1-203ENST00000431146 TMC4Q7Z404 712 aa19.48■□□□□ 0.71
USHBP1-203ENST00000431146 SPATA32Q96LK8 384 aa19.48■□□□□ 0.71
USHBP1-203ENST00000431146 UBAC1Q9BSL1 405 aa19.48■□□□□ 0.71
USHBP1-203ENST00000431146 FTOQ9C0B1 505 aaKnown RBP eCLIP19.48■□□□□ 0.71
USHBP1-203ENST00000431146 ZSCAN16Q9H4T2 348 aaPredicted RBP19.48■□□□□ 0.71
USHBP1-203ENST00000431146 ATP8A2Q9NTI2 1148 aa19.48■□□□□ 0.71
USHBP1-203ENST00000431146 MCM9Q9NXL9 1143 aa19.48■□□□□ 0.71
USHBP1-203ENST00000431146 MASTLQ96GX5 879 aa19.48■□□□□ 0.71
USHBP1-203ENST00000431146 C8orf76Q96K31 380 aa19.48■□□□□ 0.71
USHBP1-203ENST00000431146 ECM29Q5VYK3 1845 aa19.48■□□□□ 0.71
USHBP1-203ENST00000431146 TNKSO95271 1327 aa19.47■□□□□ 0.71
USHBP1-203ENST00000431146 UBE2Q2LH0YL09 131 aa19.47■□□□□ 0.71
USHBP1-203ENST00000431146 USP5P45974 858 aa19.47■□□□□ 0.71
USHBP1-203ENST00000431146 MPNDQ8N594 471 aa19.47■□□□□ 0.71
USHBP1-203ENST00000431146 FBXW7Q969H0 707 aa19.47■□□□□ 0.71
USHBP1-203ENST00000431146 ALDH1B1P30837 517 aa19.46■□□□□ 0.71
USHBP1-203ENST00000431146 GTF2IP78347 998 aa19.46■□□□□ 0.71
USHBP1-203ENST00000431146 GSTO1P78417 241 aa19.46■□□□□ 0.71
USHBP1-203ENST00000431146 NTRK3Q16288 839 aa19.46■□□□□ 0.71
USHBP1-203ENST00000431146 ILDR1Q86SU0 546 aaPredicted RBP19.46■□□□□ 0.71
USHBP1-203ENST00000431146 LEO1Q8WVC0 666 aaPredicted RBP19.46■□□□□ 0.71
USHBP1-203ENST00000431146 PDGFDQ9GZP0 370 aaPredicted RBP19.46■□□□□ 0.71
USHBP1-203ENST00000431146 ZNF219Q9P2Y4 722 aaPredicted RBP19.46■□□□□ 0.71
USHBP1-203ENST00000431146 DOK7Q18PE1 504 aa19.46■□□□□ 0.71
USHBP1-203ENST00000431146 DPP8Q6V1X1 898 aaPredicted RBP19.46■□□□□ 0.71
USHBP1-203ENST00000431146 SYNE3Q6ZMZ3 975 aa19.46■□□□□ 0.71
USHBP1-203ENST00000431146 C2CD5Q86YS7 1000 aa19.46■□□□□ 0.71
USHBP1-203ENST00000431146 TGFBRAP1Q8WUH2 860 aa19.46■□□□□ 0.71
USHBP1-203ENST00000431146 NUP133Q8WUM0 1156 aa19.46■□□□□ 0.71
USHBP1-203ENST00000431146 RTFDC1Q9BY42 306 aaPredicted RBP19.46■□□□□ 0.71
USHBP1-203ENST00000431146 SCAND2PQ9GZW5 306 aaPredicted RBP19.46■□□□□ 0.71
USHBP1-203ENST00000431146 ISY1Q9ULR0 285 aaKnown RBP19.46■□□□□ 0.71
USHBP1-203ENST00000431146 MROH7-TTC4A0A0A0MT08 1334 aa19.46■□□□□ 0.71
USHBP1-203ENST00000431146 SEC23AQ15436 765 aa19.45■□□□□ 0.7
USHBP1-203ENST00000431146 GLIPR1L2Q4G1C9 344 aa19.45■□□□□ 0.7
USHBP1-203ENST00000431146 FAM47AQ5JRC9 791 aa19.45■□□□□ 0.7
USHBP1-203ENST00000431146 CMTR1Q8N1G2 835 aaKnown RBP19.45■□□□□ 0.7
USHBP1-203ENST00000431146 CCDC82Q8N4S0 544 aa19.45■□□□□ 0.7
USHBP1-203ENST00000431146 ENAHQ8N8S7 591 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms