RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 DOCK1Q14185 1865 aa15.39■□□□□ 0.05
SMPD4-204ENST00000430682 ENTPD3O75355 529 aa15.38■□□□□ 0.05
SMPD4-204ENST00000430682 ZAP70P43403 619 aa15.38■□□□□ 0.05
SMPD4-204ENST00000430682 INHBEP58166 350 aa15.38■□□□□ 0.05
SMPD4-204ENST00000430682 ZNF341Q9BYN7 854 aa15.38■□□□□ 0.05
SMPD4-204ENST00000430682 IL1RAPL2Q9NP60 686 aa15.38■□□□□ 0.05
SMPD4-204ENST00000430682 DDX19BQ9UMR2 479 aa15.38■□□□□ 0.05
SMPD4-204ENST00000430682 CSADQ9Y600 493 aa15.38■□□□□ 0.05
SMPD4-204ENST00000430682 MYH1P12882 1939 aa15.37■□□□□ 0.05
SMPD4-204ENST00000430682 CCDC85CA6NKD9 419 aa15.37■□□□□ 0.05
SMPD4-204ENST00000430682 PHF20L1A8MW92 1017 aa15.37■□□□□ 0.05
SMPD4-204ENST00000430682 IRF6O14896 467 aa15.37■□□□□ 0.05
SMPD4-204ENST00000430682 MS4A1P11836 297 aa15.37■□□□□ 0.05
SMPD4-204ENST00000430682 CRHR2Q13324 411 aa15.37■□□□□ 0.05
SMPD4-204ENST00000430682 PICALMQ13492 652 aa15.37■□□□□ 0.05
SMPD4-204ENST00000430682 CCDC158Q5M9N0 1113 aa15.37■□□□□ 0.05
SMPD4-204ENST00000430682 CTU1Q7Z7A3 348 aaKnown RBP15.37■□□□□ 0.05
SMPD4-204ENST00000430682 FAM43AQ8N2R8 423 aa15.37■□□□□ 0.05
SMPD4-204ENST00000430682 ZNF512BQ96KM6 892 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-204ENST00000430682 BRCA2P51587 3418 aa15.36■□□□□ 0.05
SMPD4-204ENST00000430682 CCL15-CCL14A0A0B4J2E2 113 aa15.36■□□□□ 0.05
SMPD4-204ENST00000430682 MAP3K10Q02779 954 aa15.36■□□□□ 0.05
SMPD4-204ENST00000430682 CCL15Q16663 113 aa15.36■□□□□ 0.05
SMPD4-204ENST00000430682 NOM1Q5C9Z4 860 aaKnown RBP15.36■□□□□ 0.05
SMPD4-204ENST00000430682 DCAF15Q66K64 600 aa15.36■□□□□ 0.05
SMPD4-204ENST00000430682 ERO1BQ86YB8 467 aa15.36■□□□□ 0.05
SMPD4-204ENST00000430682 RHPN1Q8TCX5 695 aa15.36■□□□□ 0.05
SMPD4-204ENST00000430682 SH3RF3Q8TEJ3 882 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-204ENST00000430682 ANTXR1Q9H6X2 564 aa15.36■□□□□ 0.05
SMPD4-204ENST00000430682 LRP2BPQ9P2M1 347 aa15.36■□□□□ 0.05
SMPD4-204ENST00000430682 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-204ENST00000430682 FAM196BA6NMK8 535 aa15.35■□□□□ 0.05
SMPD4-204ENST00000430682 APBB1O00213 710 aa15.35■□□□□ 0.05
SMPD4-204ENST00000430682 FKTNO75072 461 aa15.35■□□□□ 0.05
SMPD4-204ENST00000430682 ALDH1A1P00352 501 aa15.35■□□□□ 0.05
SMPD4-204ENST00000430682 MOGSQ13724 837 aa15.35■□□□□ 0.05
SMPD4-204ENST00000430682 AACSQ86V21 672 aa15.35■□□□□ 0.05
SMPD4-204ENST00000430682 SLF2Q8IX21 1173 aa15.35■□□□□ 0.05
SMPD4-204ENST00000430682 RPAP2Q8IXW5 612 aaPredicted RBP15.35■□□□□ 0.05
SMPD4-204ENST00000430682 LDHCP07864 332 aa15.34■□□□□ 0.05
SMPD4-204ENST00000430682 GTF2A2P52657 109 aa15.34■□□□□ 0.05
SMPD4-204ENST00000430682 PPIL2Q13356 520 aa15.34■□□□□ 0.05
SMPD4-204ENST00000430682 PDE3AQ14432 1141 aa15.34■□□□□ 0.05
SMPD4-204ENST00000430682 RRP1BQ14684 758 aaKnown RBP15.34■□□□□ 0.05
SMPD4-204ENST00000430682 HOOK2Q96ED9 719 aa15.34■□□□□ 0.05
SMPD4-204ENST00000430682 AATFQ9NY61 560 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMPD4-204ENST00000430682 MYH7P12883 1935 aa15.33■□□□□ 0.05
SMPD4-204ENST00000430682 MKI67P46013 3256 aaKnown RBP15.33■□□□□ 0.04
SMPD4-204ENST00000430682 BTBD19C9JJ37 291 aa15.33■□□□□ 0.04
SMPD4-204ENST00000430682 DYNLL1P63167 89 aaKnown RBP15.33■□□□□ 0.04
SMPD4-204ENST00000430682 GSTO1P78417 241 aa15.33■□□□□ 0.04
SMPD4-204ENST00000430682 PPATQ06203 517 aa15.33■□□□□ 0.04
SMPD4-204ENST00000430682 NOL9Q5SY16 702 aaKnown RBP15.33■□□□□ 0.04
SMPD4-204ENST00000430682 NAA16Q6N069 864 aaPredicted RBP15.33■□□□□ 0.04
SMPD4-204ENST00000430682 CCDC84Q86UT8 332 aaPredicted RBP15.33■□□□□ 0.04
SMPD4-204ENST00000430682 ZSCAN29Q8IWY8 852 aaPredicted RBP15.33■□□□□ 0.04
SMPD4-204ENST00000430682 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
SMPD4-204ENST00000430682 PPP4CP60510 307 aa15.32■□□□□ 0.04
SMPD4-204ENST00000430682 ERC1Q8IUD2 1116 aa15.32■□□□□ 0.04
SMPD4-204ENST00000430682 TEX11Q8IYF3 940 aa15.32■□□□□ 0.04
SMPD4-204ENST00000430682 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.32■□□□□ 0.04
SMPD4-204ENST00000430682 OSBPL5Q9H0X9 879 aaPredicted RBP15.32■□□□□ 0.04
SMPD4-204ENST00000430682 KCNH4Q9UQ05 1017 aa15.32■□□□□ 0.04
SMPD4-204ENST00000430682 TAF1CQ15572 869 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-204ENST00000430682 CD99L2Q8TCZ2 262 aa15.31■□□□□ 0.04
SMPD4-204ENST00000430682 BCL11AQ9H165 835 aa15.31■□□□□ 0.04
SMPD4-204ENST00000430682 HPS5Q9UPZ3 1129 aa15.31■□□□□ 0.04
SMPD4-204ENST00000430682 COL2A1P02458 1487 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-204ENST00000430682 MGAMO43451 1857 aa15.31■□□□□ 0.04
SMPD4-204ENST00000430682 DOCK3Q8IZD9 2030 aa15.31■□□□□ 0.04
SMPD4-204ENST00000430682 KIAA0100Q14667 2235 aaKnown RBP15.31■□□□□ 0.04
SMPD4-204ENST00000430682 CETPP11597 493 aa15.3■□□□□ 0.04
SMPD4-204ENST00000430682 CYP7A1P22680 504 aa15.3■□□□□ 0.04
SMPD4-204ENST00000430682 JAG1P78504 1218 aa15.3■□□□□ 0.04
SMPD4-204ENST00000430682 SNAPC2Q13487 334 aa15.3■□□□□ 0.04
SMPD4-204ENST00000430682 OTUD7BQ6GQQ9 843 aa15.3■□□□□ 0.04
SMPD4-204ENST00000430682 OTOP1Q7RTM1 612 aa15.3■□□□□ 0.04
SMPD4-204ENST00000430682 SCYL3Q8IZE3 742 aa15.3■□□□□ 0.04
SMPD4-204ENST00000430682 KIF1BPQ96EK5 621 aa15.3■□□□□ 0.04
SMPD4-204ENST00000430682 EDC3Q96F86 508 aaKnown RBP15.3■□□□□ 0.04
SMPD4-204ENST00000430682 DDX60LQ5H9U9 1706 aaKnown RBP15.29■□□□□ 0.04
SMPD4-204ENST00000430682 SMARCA5O60264 1052 aaPredicted RBP15.29■□□□□ 0.04
SMPD4-204ENST00000430682 IDH1O75874 414 aaKnown RBP15.29■□□□□ 0.04
SMPD4-204ENST00000430682 MAP4K4O95819 1239 aaPredicted RBP15.29■□□□□ 0.04
SMPD4-204ENST00000430682 PTPRAP18433 802 aa15.29■□□□□ 0.04
SMPD4-204ENST00000430682 RGS19P49795 217 aa15.29■□□□□ 0.04
SMPD4-204ENST00000430682 HSP90AB4PQ58FF6 505 aa15.29■□□□□ 0.04
SMPD4-204ENST00000430682 GPAT2Q6NUI2 795 aa15.29■□□□□ 0.04
SMPD4-204ENST00000430682 MAPKAPK5Q8IW41 473 aa15.29■□□□□ 0.04
SMPD4-204ENST00000430682 MAGEB6Q8N7X4 407 aa15.29■□□□□ 0.04
SMPD4-204ENST00000430682 MIGA1Q8NAN2 632 aa15.29■□□□□ 0.04
SMPD4-204ENST00000430682 TGFBRAP1Q8WUH2 860 aa15.29■□□□□ 0.04
SMPD4-204ENST00000430682 ZHX2Q9Y6X8 837 aa15.29■□□□□ 0.04
SMPD4-204ENST00000430682 BAZ2AQ9UIF9 1905 aaKnown RBP15.29■□□□□ 0.04
SMPD4-204ENST00000430682 PDE4DIPQ5VU43 2346 aa15.28■□□□□ 0.04
SMPD4-204ENST00000430682 ADGRA2Q96PE1 1338 aa15.28■□□□□ 0.04
SMPD4-204ENST00000430682 TBC1D12O60347 775 aa15.28■□□□□ 0.04
SMPD4-204ENST00000430682 HMMRO75330 724 aa15.28■□□□□ 0.04
SMPD4-204ENST00000430682 SOX10P56693 466 aa15.28■□□□□ 0.04
SMPD4-204ENST00000430682 SP3Q02447 781 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms