RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 TDRD7Q8NHU6 1098 aaKnown RBP12.68□□□□□ -0.38
ATG4B-212ENST00000430617 PLA2G12BQ9BX93 195 aa12.68□□□□□ -0.38
ATG4B-212ENST00000430617 TTYH1Q9H313 450 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-212ENST00000430617 OGDHLQ9ULD0 1010 aa12.68□□□□□ -0.38
ATG4B-212ENST00000430617 DDX58O95786 925 aaKnown RBP12.67□□□□□ -0.38
ATG4B-212ENST00000430617 COL6A1P12109 1028 aa12.67□□□□□ -0.38
ATG4B-212ENST00000430617 RARSP54136 660 aaKnown RBP12.67□□□□□ -0.38
ATG4B-212ENST00000430617 RRP1P56182 461 aaKnown RBP12.67□□□□□ -0.38
ATG4B-212ENST00000430617 TJAP1Q5JTD0 557 aa12.67□□□□□ -0.38
ATG4B-212ENST00000430617 DCAF15Q66K64 600 aa12.67□□□□□ -0.38
ATG4B-212ENST00000430617 KSR2Q6VAB6 950 aa12.67□□□□□ -0.38
ATG4B-212ENST00000430617 FAM83AQ86UY5 434 aa12.67□□□□□ -0.38
ATG4B-212ENST00000430617 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
ATG4B-212ENST00000430617 USP38Q8NB14 1042 aa12.67□□□□□ -0.38
ATG4B-212ENST00000430617 HMX1Q9NP08 348 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-212ENST00000430617 ZNF112Q9UJU3 913 aa12.67□□□□□ -0.38
ATG4B-212ENST00000430617 RPAP1Q9BWH6 1393 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-212ENST00000430617 PLIN1O60240 522 aa12.66□□□□□ -0.38
ATG4B-212ENST00000430617 HMGCRP04035 888 aa12.66□□□□□ -0.38
ATG4B-212ENST00000430617 GYG1P46976 350 aa12.66□□□□□ -0.38
ATG4B-212ENST00000430617 MAP3K12Q12852 859 aa12.66□□□□□ -0.38
ATG4B-212ENST00000430617 C8orf58Q8NAV2 365 aa12.66□□□□□ -0.38
ATG4B-212ENST00000430617 MYH2Q9UKX2 1941 aa12.65□□□□□ -0.38
ATG4B-212ENST00000430617 ANKRD18BA2A2Z9 1011 aa12.65□□□□□ -0.38
ATG4B-212ENST00000430617 FOSL2P15408 326 aa12.65□□□□□ -0.38
ATG4B-212ENST00000430617 TWISTNBQ3B726 338 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-212ENST00000430617 ANKRD13CQ8N6S4 541 aa12.65□□□□□ -0.38
ATG4B-212ENST00000430617 COA7Q96BR5 231 aa12.65□□□□□ -0.38
ATG4B-212ENST00000430617 HOOK2Q96ED9 719 aa12.65□□□□□ -0.38
ATG4B-212ENST00000430617 PLXNA1Q9UIW2 1896 aa12.64□□□□□ -0.39
ATG4B-212ENST00000430617 A0A0G2JLL6 359 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-212ENST00000430617 CXCL11O14625 94 aa12.64□□□□□ -0.39
ATG4B-212ENST00000430617 VAMP4O75379 141 aa12.64□□□□□ -0.39
ATG4B-212ENST00000430617 GCKRQ14397 625 aa12.64□□□□□ -0.39
ATG4B-212ENST00000430617 SHHQ15465 462 aa12.64□□□□□ -0.39
ATG4B-212ENST00000430617 NOL9Q5SY16 702 aaKnown RBP12.64□□□□□ -0.39
ATG4B-212ENST00000430617 FKBP1CQ5VVH2 108 aa12.64□□□□□ -0.39
ATG4B-212ENST00000430617 APOBEC3HQ6NTF7 200 aaKnown RBP12.64□□□□□ -0.39
ATG4B-212ENST00000430617 GADL1Q6ZQY3 521 aa12.64□□□□□ -0.39
ATG4B-212ENST00000430617 PRRT2Q7Z6L0 340 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-212ENST00000430617 ZNF594Q96JF6 807 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-212ENST00000430617 FAM84BQ96KN1 310 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-212ENST00000430617 GJD2Q9UKL4 321 aa12.64□□□□□ -0.39
ATG4B-212ENST00000430617 IQSEC3Q9UPP2 1182 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-212ENST00000430617 BCAR3O75815 825 aa12.63□□□□□ -0.39
ATG4B-212ENST00000430617 HDLBPQ00341 1268 aaKnown RBP12.63□□□□□ -0.39
ATG4B-212ENST00000430617 NEXNQ0ZGT2 675 aa12.63□□□□□ -0.39
ATG4B-212ENST00000430617 ALDH1L2Q3SY69 923 aa12.63□□□□□ -0.39
ATG4B-212ENST00000430617 C9orf50Q5SZB4 431 aa12.63□□□□□ -0.39
ATG4B-212ENST00000430617 SMCR8Q8TEV9 937 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-212ENST00000430617 TRIB2Q92519 343 aa12.63□□□□□ -0.39
ATG4B-212ENST00000430617 TEKT1Q969V4 418 aa12.63□□□□□ -0.39
ATG4B-212ENST00000430617 ZDHHC15Q96MV8 337 aa12.63□□□□□ -0.39
ATG4B-212ENST00000430617 XIRP2A4UGR9 3374 aa12.62□□□□□ -0.39
ATG4B-212ENST00000430617 GBF1Q92538 1859 aa12.62□□□□□ -0.39
ATG4B-212ENST00000430617 HIBADHP31937 336 aaKnown RBP12.62□□□□□ -0.39
ATG4B-212ENST00000430617 FOXO4P98177 505 aa12.62□□□□□ -0.39
ATG4B-212ENST00000430617 MAP3K21Q5TCX8 1036 aa12.62□□□□□ -0.39
ATG4B-212ENST00000430617 FASTKD5Q7L8L6 764 aaKnown RBP12.62□□□□□ -0.39
ATG4B-212ENST00000430617 SSH1Q8WYL5 1049 aa12.62□□□□□ -0.39
ATG4B-212ENST00000430617 LBHD1Q9BQE6 289 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-212ENST00000430617 TMOD2Q9NZR1 351 aa12.62□□□□□ -0.39
ATG4B-212ENST00000430617 SLC45A1Q9Y2W3 748 aa12.62□□□□□ -0.39
ATG4B-212ENST00000430617 ZHX2Q9Y6X8 837 aa12.62□□□□□ -0.39
ATG4B-212ENST00000430617 TCP10Q12799 353 aa12.61□□□□□ -0.39
ATG4B-212ENST00000430617 IFIT5Q13325 482 aaKnown RBP12.61□□□□□ -0.39
ATG4B-212ENST00000430617 G2E3Q7L622 706 aa12.61□□□□□ -0.39
ATG4B-212ENST00000430617 FAM151AQ8WW52 585 aa12.61□□□□□ -0.39
ATG4B-212ENST00000430617 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
ATG4B-212ENST00000430617 PHF20L1A8MW92 1017 aa12.6□□□□□ -0.39
ATG4B-212ENST00000430617 PRKAR2AP13861 404 aaKnown RBP12.6□□□□□ -0.39
ATG4B-212ENST00000430617 PTPRAP18433 802 aa12.6□□□□□ -0.39
ATG4B-212ENST00000430617 CHAF1AQ13111 956 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-212ENST00000430617 TREML2Q5T2D2 321 aa12.6□□□□□ -0.39
ATG4B-212ENST00000430617 LHX8Q68G74 356 aa12.6□□□□□ -0.39
ATG4B-212ENST00000430617 SMC4Q9NTJ3 1288 aa12.6□□□□□ -0.39
ATG4B-212ENST00000430617 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-212ENST00000430617 GTF3C3Q9Y5Q9 886 aa12.6□□□□□ -0.39
ATG4B-212ENST00000430617 KIF16BQ96L93 1317 aa12.6□□□□□ -0.39
ATG4B-212ENST00000430617 SLURP2P0DP57 97 aa12.59□□□□□ -0.39
ATG4B-212ENST00000430617 NFIAQ12857 509 aa12.59□□□□□ -0.39
ATG4B-212ENST00000430617 FAM110CQ1W6H9 321 aa12.59□□□□□ -0.39
ATG4B-212ENST00000430617 CCDC30Q5VVM6 783 aa12.59□□□□□ -0.39
ATG4B-212ENST00000430617 LDHAL6AQ6ZMR3 332 aa12.59□□□□□ -0.39
ATG4B-212ENST00000430617 ZFPM1Q8IX07 1006 aa12.59□□□□□ -0.39
ATG4B-212ENST00000430617 MRPL50Q8N5N7 158 aaKnown RBP12.59□□□□□ -0.39
ATG4B-212ENST00000430617 CHMP3Q9Y3E7 222 aa12.59□□□□□ -0.39
ATG4B-212ENST00000430617 ATRNL1Q5VV63 1379 aa12.58□□□□□ -0.4
ATG4B-212ENST00000430617 NEFLP07196 543 aa12.58□□□□□ -0.4
ATG4B-212ENST00000430617 CYP2B6P20813 491 aa12.58□□□□□ -0.4
ATG4B-212ENST00000430617 CCND3P30281 292 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-212ENST00000430617 SMAD3P84022 425 aaKnown RBP12.58□□□□□ -0.4
ATG4B-212ENST00000430617 UBE4AQ14139 1066 aa12.58□□□□□ -0.4
ATG4B-212ENST00000430617 CCDC84Q86UT8 332 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-212ENST00000430617 SCYL3Q8IZE3 742 aa12.58□□□□□ -0.4
ATG4B-212ENST00000430617 MRIQ9BWK5 157 aa12.58□□□□□ -0.4
ATG4B-212ENST00000430617 CNNM1Q9NRU3 951 aa12.58□□□□□ -0.4
ATG4B-212ENST00000430617 SYNGAP1Q96PV0 1343 aa12.58□□□□□ -0.4
ATG4B-212ENST00000430617 TRIM75PA6NK02 468 aa12.57□□□□□ -0.4
ATG4B-212ENST00000430617 IRX6P78412 446 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms