RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 XAGE2Q96GT9 111 aa8.19□□□□□ -1.1
SMC6-205ENST00000430591 NEUROD6Q96NK8 337 aa8.19□□□□□ -1.1
SMC6-205ENST00000430591 CCDC8Q9H0W5 538 aaPredicted RBP8.19□□□□□ -1.1
SMC6-205ENST00000430591 TDRD3Q9H7E2 651 aaKnown RBP8.19□□□□□ -1.1
SMC6-205ENST00000430591 SNRKQ9NRH2 765 aa8.19□□□□□ -1.1
SMC6-205ENST00000430591 ZBTB40Q9NUA8 1239 aa8.19□□□□□ -1.1
SMC6-205ENST00000430591 FAM198AQ9UFP1 575 aa8.19□□□□□ -1.1
SMC6-205ENST00000430591 SEPT9Q9UHD8 586 aaPredicted RBP8.19□□□□□ -1.1
SMC6-205ENST00000430591 ABT1Q9ULW3 272 aaKnown RBP8.19□□□□□ -1.1
SMC6-205ENST00000430591 TTF2Q9UNY4 1162 aaKnown RBP8.19□□□□□ -1.1
SMC6-205ENST00000430591 THSD7BQ9C0I4 1608 aa8.18□□□□□ -1.1
SMC6-205ENST00000430591 C3orf80F5H4A9 247 aa8.18□□□□□ -1.1
SMC6-205ENST00000430591 FRAT2O75474 233 aaPredicted RBP8.18□□□□□ -1.1
SMC6-205ENST00000430591 SURF6O75683 361 aaKnown RBP8.18□□□□□ -1.1
SMC6-205ENST00000430591 IFIT1P09914 478 aaKnown RBP8.18□□□□□ -1.1
SMC6-205ENST00000430591 CRKP46108 304 aa8.18□□□□□ -1.1
SMC6-205ENST00000430591 RBM5P52756 815 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMC6-205ENST00000430591 TPRNQ4KMQ1 711 aa8.18□□□□□ -1.1
SMC6-205ENST00000430591 CAVIN4Q5BKX8 364 aa8.18□□□□□ -1.1
SMC6-205ENST00000430591 CDC37L1Q7L3B6 337 aa8.18□□□□□ -1.1
SMC6-205ENST00000430591 VPS37DQ86XT2 251 aa8.18□□□□□ -1.1
SMC6-205ENST00000430591 HOMEZQ8IX15 550 aa8.18□□□□□ -1.1
SMC6-205ENST00000430591 ZC3H15Q8WU90 426 aaKnown RBP8.18□□□□□ -1.1
SMC6-205ENST00000430591 DCPSQ96C86 337 aaKnown RBP8.18□□□□□ -1.1
SMC6-205ENST00000430591 CRBNQ96SW2 442 aa8.18□□□□□ -1.1
SMC6-205ENST00000430591 IL1RAPL2Q9NP60 686 aa8.18□□□□□ -1.1
SMC6-205ENST00000430591 TLL2Q9Y6L7 1015 aa8.18□□□□□ -1.1
SMC6-205ENST00000430591 PAPPA2Q9BXP8 1791 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 RASSF10A6NK89 507 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 TCP10L2B9ZVM9 353 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 UBE2Q2LH0YL09 131 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 SMARCA5O60264 1052 aaPredicted RBP8.17□□□□□ -1.1
SMC6-205ENST00000430591 MCAMP43121 646 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 RRP1P56182 461 aaKnown RBP8.17□□□□□ -1.1
SMC6-205ENST00000430591 G3BP1Q13283 466 aaKnown RBP eCLIP8.17□□□□□ -1.1
SMC6-205ENST00000430591 DLGAP5Q15398 846 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 DEFB115Q30KQ5 88 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 TNNI3KQ59H18 835 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 SAPCD2Q86UD0 394 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 JMYQ8N9B5 988 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 EAF2Q96CJ1 260 aaPredicted RBP8.17□□□□□ -1.1
SMC6-205ENST00000430591 VEZTQ9HBM0 779 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 GBA2Q9HCG7 927 aaPredicted RBP8.17□□□□□ -1.1
SMC6-205ENST00000430591 HMG20BQ9P0W2 317 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 ZNF70Q9UC06 446 aaPredicted RBP8.17□□□□□ -1.1
SMC6-205ENST00000430591 DBNLQ9UJU6 430 aaKnown RBP8.17□□□□□ -1.1
SMC6-205ENST00000430591 FPGT-TNNI3KV9GXZ4 949 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 MYO3BQ8WXR4 1341 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 CDK5RAP2Q96SN8 1893 aa8.17□□□□□ -1.1
SMC6-205ENST00000430591 HSPA1AP0DMV8 641 aaKnown RBP8.16□□□□□ -1.1
SMC6-205ENST00000430591 HSPA1BP0DMV9 641 aaKnown RBP8.16□□□□□ -1.1
SMC6-205ENST00000430591 PTPN5P54829 565 aa8.16□□□□□ -1.1
SMC6-205ENST00000430591 FKBP1AP62942 108 aaKnown RBP8.16□□□□□ -1.1
SMC6-205ENST00000430591 IRX6P78412 446 aaPredicted RBP8.16□□□□□ -1.1
SMC6-205ENST00000430591 OS9Q13438 667 aaPredicted RBP8.16□□□□□ -1.1
SMC6-205ENST00000430591 NBPF12Q5TAG4 269 aaPredicted RBP8.16□□□□□ -1.1
SMC6-205ENST00000430591 SULF1Q8IWU6 871 aa8.16□□□□□ -1.1
SMC6-205ENST00000430591 ZFPM1Q8IX07 1006 aa8.16□□□□□ -1.1
SMC6-205ENST00000430591 OGFOD1Q8N543 542 aa8.16□□□□□ -1.1
SMC6-205ENST00000430591 CLMNQ96JQ2 1002 aa8.16□□□□□ -1.1
SMC6-205ENST00000430591 CAPNS2Q96L46 248 aa8.16□□□□□ -1.1
SMC6-205ENST00000430591 WDR33Q9C0J8 1336 aaKnown RBP8.16□□□□□ -1.1
SMC6-205ENST00000430591 TMEM39BQ9GZU3 492 aa8.16□□□□□ -1.1
SMC6-205ENST00000430591 DDX19BQ9UMR2 479 aa8.16□□□□□ -1.1
SMC6-205ENST00000430591 NOP58Q9Y2X3 529 aaKnown RBP8.16□□□□□ -1.1
SMC6-205ENST00000430591 PCDHB15Q9Y5E8 787 aa8.16□□□□□ -1.1
SMC6-205ENST00000430591 AK9Q5TCS8 1911 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 GOLGA8CPA6NN73 597 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 FAM155AB1AL88 458 aaPredicted RBP8.15□□□□□ -1.1
SMC6-205ENST00000430591 FOXN1O15353 648 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 CHGBP05060 677 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 ZAP70P43403 619 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 PRSS12P56730 875 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 HUNKP57058 714 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 NFIAQ12857 509 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 SLFNL1Q499Z3 407 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 APOBEC3HQ6NTF7 200 aaKnown RBP8.15□□□□□ -1.1
SMC6-205ENST00000430591 LAPTM4BQ86VI4 370 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 MTMR14Q8NCE2 650 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 EDC3Q96F86 508 aaKnown RBP8.15□□□□□ -1.1
SMC6-205ENST00000430591 ZFRQ96KR1 1074 aaKnown RBP8.15□□□□□ -1.1
SMC6-205ENST00000430591 PIH1D3Q9NQM4 214 aaKnown RBP8.15□□□□□ -1.1
SMC6-205ENST00000430591 NPDC1Q9NQX5 325 aaPredicted RBP8.15□□□□□ -1.1
SMC6-205ENST00000430591 ABCF2Q9UG63 623 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 HDAC9Q9UKV0 1011 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 DAGLAQ9Y4D2 1042 aa8.15□□□□□ -1.1
SMC6-205ENST00000430591 DOCK2Q92608 1830 aa8.15□□□□□ -1.11
SMC6-205ENST00000430591 PITPNM2Q9BZ72 1349 aa8.14□□□□□ -1.11
SMC6-205ENST00000430591 SEMA3EO15041 775 aa8.14□□□□□ -1.11
SMC6-205ENST00000430591 CYP2E1P05181 493 aaPredicted RBP8.14□□□□□ -1.11
SMC6-205ENST00000430591 ARID4AP29374 1257 aaPredicted RBP8.14□□□□□ -1.11
SMC6-205ENST00000430591 PDE3AQ14432 1141 aa8.14□□□□□ -1.11
SMC6-205ENST00000430591 RASA3Q14644 834 aa8.14□□□□□ -1.11
SMC6-205ENST00000430591 CDC42EP5Q6NZY7 148 aa8.14□□□□□ -1.11
SMC6-205ENST00000430591 ADGRA1Q86SQ6 560 aa8.14□□□□□ -1.11
SMC6-205ENST00000430591 RHPN1Q8TCX5 695 aa8.14□□□□□ -1.11
SMC6-205ENST00000430591 TEPSINQ96N21 525 aa8.14□□□□□ -1.11
SMC6-205ENST00000430591 DEFB129Q9H1M3 183 aa8.14□□□□□ -1.11
SMC6-205ENST00000430591 ANTXR1Q9H6X2 564 aa8.14□□□□□ -1.11
SMC6-205ENST00000430591 DDX4Q9NQI0 724 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms