RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 GJD4Q96KN9 370 aaPredicted RBP17.29■□□□□ 0.36
LINC00839-202ENST00000429940 CLIC6Q96NY7 704 aa17.29■□□□□ 0.36
LINC00839-202ENST00000429940 MAP3K14Q99558 947 aa17.29■□□□□ 0.36
LINC00839-202ENST00000429940 UTP14AQ9BVJ6 771 aaKnown RBP17.29■□□□□ 0.36
LINC00839-202ENST00000429940 TMX1Q9H3N1 280 aa17.29■□□□□ 0.36
LINC00839-202ENST00000429940 QTRT2Q9H974 415 aaKnown RBP17.29■□□□□ 0.36
LINC00839-202ENST00000429940 ST7Q9NRC1 585 aa17.29■□□□□ 0.36
LINC00839-202ENST00000429940 KCPQ6ZWJ8 1503 aa17.29■□□□□ 0.36
LINC00839-202ENST00000429940 SH2B2O14492 632 aaPredicted RBP17.28■□□□□ 0.36
LINC00839-202ENST00000429940 TOP1P11387 765 aaKnown RBP17.28■□□□□ 0.36
LINC00839-202ENST00000429940 TRIM65Q6PJ69 517 aa17.28■□□□□ 0.36
LINC00839-202ENST00000429940 TBC1D10CQ8IV04 446 aa17.28■□□□□ 0.36
LINC00839-202ENST00000429940 ISCA1Q9BUE6 129 aa17.28■□□□□ 0.36
LINC00839-202ENST00000429940 ITGB4P16144 1822 aa17.28■□□□□ 0.36
LINC00839-202ENST00000429940 FAM237AA0A1B0GTK4 181 aa17.28■□□□□ 0.36
LINC00839-202ENST00000429940 METTL16Q86W50 562 aaKnown RBP17.28■□□□□ 0.36
LINC00839-202ENST00000429940 UBXN4Q92575 508 aa17.28■□□□□ 0.36
LINC00839-202ENST00000429940 CDCA7Q9BWT1 371 aaPredicted RBP17.28■□□□□ 0.36
LINC00839-202ENST00000429940 FANCLQ9NW38 375 aa17.28■□□□□ 0.36
LINC00839-202ENST00000429940 ECM29Q5VYK3 1845 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 TMEM232C9JQI7 657 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 KCNQ2O43526 872 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 MYO1BO43795 1136 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 CUTAO60888 179 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 CDC27P30260 824 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 GOLGA8FQ08AF8 430 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 GOLGA8DPQ0D2H9 430 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 TRIM29Q14134 588 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 LONRF3Q496Y0 759 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 APOA5Q6Q788 366 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 MICU3Q86XE3 530 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 CNNM3Q8NE01 707 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 MNS1Q8NEH6 495 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 NKX2-3Q8TAU0 364 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 FHOD1Q9Y613 1164 aa17.27■□□□□ 0.36
LINC00839-202ENST00000429940 URI1O94763 535 aaPredicted RBP17.27■□□□□ 0.35
LINC00839-202ENST00000429940 APPP05067 770 aa17.27■□□□□ 0.35
LINC00839-202ENST00000429940 ADD2P35612 726 aa17.27■□□□□ 0.35
LINC00839-202ENST00000429940 IFIT5Q13325 482 aaKnown RBP17.27■□□□□ 0.35
LINC00839-202ENST00000429940 CCDC102BQ68D86 513 aa17.27■□□□□ 0.35
LINC00839-202ENST00000429940 PTF1AQ7RTS3 328 aa17.27■□□□□ 0.35
LINC00839-202ENST00000429940 FCHSD1Q86WN1 690 aa17.27■□□□□ 0.35
LINC00839-202ENST00000429940 REXO1L1PQ8IX06 675 aa17.27■□□□□ 0.35
LINC00839-202ENST00000429940 ZSCAN12O43309 604 aa17.26■□□□□ 0.35
LINC00839-202ENST00000429940 MCAMP43121 646 aa17.26■□□□□ 0.35
LINC00839-202ENST00000429940 TCIRG1Q13488 830 aa17.26■□□□□ 0.35
LINC00839-202ENST00000429940 PTPN21Q16825 1174 aa17.26■□□□□ 0.35
LINC00839-202ENST00000429940 SLC9C2Q5TAH2 1124 aa17.26■□□□□ 0.35
LINC00839-202ENST00000429940 KRBA2Q6ZNG9 492 aa17.26■□□□□ 0.35
LINC00839-202ENST00000429940 SRRTQ9BXP5 876 aaKnown RBP17.26■□□□□ 0.35
LINC00839-202ENST00000429940 ARGLU1Q9NWB6 273 aaPredicted RBP17.26■□□□□ 0.35
LINC00839-202ENST00000429940 KCNH3Q9ULD8 1083 aa17.26■□□□□ 0.35
LINC00839-202ENST00000429940 ZNF330Q9Y3S2 320 aaPredicted RBP17.26■□□□□ 0.35
LINC00839-202ENST00000429940 ZBTB43O43298 467 aa17.26■□□□□ 0.35
LINC00839-202ENST00000429940 IARSP41252 1262 aaKnown RBP17.26■□□□□ 0.35
LINC00839-202ENST00000429940 FAM89AQ96GI7 184 aa17.26■□□□□ 0.35
LINC00839-202ENST00000429940 SENP2Q9HC62 589 aa17.26■□□□□ 0.35
LINC00839-202ENST00000429940 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.26■□□□□ 0.35
LINC00839-202ENST00000429940 PCDHA5Q9Y5H7 936 aa17.26■□□□□ 0.35
LINC00839-202ENST00000429940 PAPPAQ13219 1627 aa17.25■□□□□ 0.35
LINC00839-202ENST00000429940 B4E1Z4 1266 aa17.25■□□□□ 0.35
LINC00839-202ENST00000429940 PNMA6AP0CW24 399 aaPredicted RBP17.25■□□□□ 0.35
LINC00839-202ENST00000429940 METTL24Q5JXM2 366 aa17.25■□□□□ 0.35
LINC00839-202ENST00000429940 NFXL1Q6ZNB6 911 aa17.25■□□□□ 0.35
LINC00839-202ENST00000429940 FOXP4Q8IVH2 680 aaPredicted RBP17.25■□□□□ 0.35
LINC00839-202ENST00000429940 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.25■□□□□ 0.35
LINC00839-202ENST00000429940 RIC1Q4ADV7 1423 aa17.25■□□□□ 0.35
LINC00839-202ENST00000429940 FANCGO15287 622 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 ARHGAP6O43182 974 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 ATRNO75882 1429 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 FAM193AP78312 1265 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 TMCO3Q6UWJ1 677 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 TMEM87BQ96K49 555 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 NOL10Q9BSC4 688 aaKnown RBP17.24■□□□□ 0.35
LINC00839-202ENST00000429940 PARP3Q9Y6F1 533 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 GOLGA8AA7E2F4 631 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 TADA3O75528 432 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 PDE4BQ07343 736 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 NTRK3Q16288 839 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 TMEM139Q8IV31 216 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 CARD6Q9BX69 1037 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 INTS13Q9NVM9 706 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 TRPC5Q9UL62 973 aaPredicted RBP17.24■□□□□ 0.35
LINC00839-202ENST00000429940 PPP2R2CQ9Y2T4 447 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 UBN2Q6ZU65 1347 aa17.24■□□□□ 0.35
LINC00839-202ENST00000429940 CCDC66A2RUB6 948 aa17.23■□□□□ 0.35
LINC00839-202ENST00000429940 VWA3AA6NCI4 1184 aa17.23■□□□□ 0.35
LINC00839-202ENST00000429940 EFCAB8A8MWE9 144 aa17.23■□□□□ 0.35
LINC00839-202ENST00000429940 RANBP6O60518 1105 aaKnown RBP17.23■□□□□ 0.35
LINC00839-202ENST00000429940 PCCAP05165 728 aaPredicted RBP17.23■□□□□ 0.35
LINC00839-202ENST00000429940 CSF1RP07333 972 aa17.23■□□□□ 0.35
LINC00839-202ENST00000429940 BMP6P22004 513 aa17.23■□□□□ 0.35
LINC00839-202ENST00000429940 HOOK1Q9UJC3 728 aaKnown RBP17.23■□□□□ 0.35
LINC00839-202ENST00000429940 DOT1LQ8TEK3 1739 aa17.23■□□□□ 0.35
LINC00839-202ENST00000429940 FOXN1O15353 648 aa17.23■□□□□ 0.35
LINC00839-202ENST00000429940 IDH1O75874 414 aaKnown RBP17.23■□□□□ 0.35
LINC00839-202ENST00000429940 TTF1Q15361 905 aaPredicted RBP17.23■□□□□ 0.35
LINC00839-202ENST00000429940 HSP90AA4PQ58FG1 418 aa17.23■□□□□ 0.35
LINC00839-202ENST00000429940 CREBRFQ8IUR6 639 aa17.23■□□□□ 0.35
LINC00839-202ENST00000429940 FAM177A1Q8N128 213 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms