RNA–Protein interactions for RNA: ENST00000429798.1

LIMD1-AS1-202, LIMD1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene LIMD1-AS1, Length 955 nt, Biotype antisense RNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-AS1-202ENST00000429798 SH3RF3Q8TEJ3 882 aaPredicted RBP12.24□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 L3MBTL3Q96JM7 780 aaPredicted RBP12.24□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 ADARB2Q9NS39 739 aaKnown RBP12.24□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 ATP8A2Q9NTI2 1148 aa12.24□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 HACL1Q9UJ83 578 aa12.24□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 ZMYM6O95789 1325 aa12.23□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 ZKSCAN1P17029 563 aaPredicted RBP12.23□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 TNNI2P48788 182 aa12.23□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 IMMTQ16891 758 aaKnown RBP12.23□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 TBC1D10BQ4KMP7 808 aaPredicted RBP12.23□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 APOBEC3HQ6NTF7 200 aaKnown RBP12.23□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 CDC42EP5Q6NZY7 148 aa12.23□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 TGFBRAP1Q8WUH2 860 aa12.23□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 TSPYL2Q9H2G4 693 aaPredicted RBP12.23□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 VEZTQ9HBM0 779 aa12.23□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 SLC3A2P08195 630 aaKnown RBP12.22□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 C7P10643 843 aa12.22□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 PICALMQ13492 652 aa12.22□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 SDR42E1Q8WUS8 393 aa12.22□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 SLC39A7Q92504 469 aa12.22□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 LSG1Q9H089 658 aaKnown RBP12.22□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 IL25Q9H293 177 aa12.22□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 TDRD3Q9H7E2 651 aaKnown RBP12.22□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 ARPP21Q9UBL0 812 aaPredicted RBP12.22□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 RBM8AQ9Y5S9 174 aaKnown RBP12.22□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 ADAMTSL1Q8N6G6 1762 aa12.22□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 FLT1P17948 1338 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 CLRN2A0PK11 232 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 WNT10BO00744 389 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 POLR3DP05423 398 aaPredicted RBP12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 HLA-DOAP06340 250 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 EPS15P42566 896 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 RHBDL3P58872 404 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 PTH1RQ03431 593 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 ALX1Q15699 326 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 VPS53Q5VIR6 699 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 USP50Q70EL3 339 aaPredicted RBP12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 SAMD7Q7Z3H4 446 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 APOBEC3FQ8IUX4 373 aaKnown RBP12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 MAPKAPK5Q8IW41 473 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 ZSCAN29Q8IWY8 852 aaPredicted RBP12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 IFNL3Q8IZI9 196 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 MAP4K1Q92918 833 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 PRMT6Q96LA8 375 aaPredicted RBP12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 TRIM34Q9BYJ4 488 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 DCP1AQ9NPI6 582 aaPredicted RBP12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 MCM9Q9NXL9 1143 aa12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 ZNF70Q9UC06 446 aaPredicted RBP12.21□□□□□ -0.45
LIMD1-AS1-202ENST00000429798 SHTN1A0MZ66 631 aa12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 GSG1L2A8MUP6 293 aa12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 ZNF213O14771 459 aa12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 PRKAB2O43741 272 aa12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 EPHX2P34913 555 aa12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 FKBP1CQ5VVH2 108 aa12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 PNMA8AQ86V59 439 aaPredicted RBP12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 IDI2Q9BXS1 227 aa12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 USP26Q9BXU7 913 aa12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 C22orf23Q9BZE7 217 aa12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 DHX36Q9H2U1 1008 aaKnown RBP12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 ZNF287Q9HBT7 754 aa12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 NAV1Q8NEY1 1877 aa12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 SCN4AP35499 1836 aa12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 WDR90Q96KV7 1748 aa12.2□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 ECM29Q5VYK3 1845 aa12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 TCP10L2B9ZVM9 353 aa12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 ENTPD3O75355 529 aa12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 WDHD1O75717 1129 aaPredicted RBP12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 SEC24BO95487 1268 aa12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 FGAP02671 866 aa12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 TCP10Q12799 353 aa12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 KRT32Q14532 448 aa12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 NBPF9Q3BBW0 867 aa12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 EAPPQ56P03 285 aaPredicted RBP12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 TTC6Q86TZ1 520 aa12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 TRPM4Q8TD43 1214 aa12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 DCPSQ96C86 337 aaKnown RBP12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 ZBED3Q96IU2 234 aaPredicted RBP12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 OSBPL5Q9H0X9 879 aaPredicted RBP12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 RNF41Q9H4P4 317 aaPredicted RBP12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 EPB41L4AQ9HCS5 686 aaPredicted RBP12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 GGA3Q9NZ52 723 aa12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 PCDHAC2Q9Y5I4 1007 aa12.19□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 PITPNM2Q9BZ72 1349 aa12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 POTEMA6NI47 508 aa12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 MINDY4BA8MYZ0 360 aa12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 VEGFAP15692 232 aaPredicted RBP12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 HSPA4P34932 840 aa12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 CACNB3P54284 484 aa12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 TRDNQ13061 729 aa12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 CREB3L3Q68CJ9 461 aa12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 FAM83AQ86UY5 434 aa12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 CRACR2BQ8N4Y2 399 aaPredicted RBP12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 HOOK2Q96ED9 719 aa12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 TAF1DQ9H5J8 278 aaPredicted RBP12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 SAP30BPQ9UHR5 308 aaKnown RBP12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 COL2A1P02458 1487 aaPredicted RBP12.18□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 FOCADQ5VW36 1801 aa12.17□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 USP17L12C9JPN9 530 aa12.17□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 USP17L21D6R901 530 aa12.17□□□□□ -0.46
LIMD1-AS1-202ENST00000429798 SLC27A2O14975 620 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms