RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 SH3RF3Q8TEJ3 882 aaPredicted RBP21.22■□□□□ 0.99
CTSD-203ENST00000429746 GCC1Q96CN9 775 aa21.22■□□□□ 0.99
CTSD-203ENST00000429746 ECHDC1Q9NTX5 307 aa21.22■□□□□ 0.99
CTSD-203ENST00000429746 DDTLA6NHG4 134 aaPredicted RBP21.21■□□□□ 0.99
CTSD-203ENST00000429746 IDH1O75874 414 aaKnown RBP21.21■□□□□ 0.99
CTSD-203ENST00000429746 DYNLL1P63167 89 aaKnown RBP21.21■□□□□ 0.99
CTSD-203ENST00000429746 SLFNL1Q499Z3 407 aa21.21■□□□□ 0.99
CTSD-203ENST00000429746 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.21■□□□□ 0.99
CTSD-203ENST00000429746 ARMC9Q7Z3E5 817 aa21.21■□□□□ 0.99
CTSD-203ENST00000429746 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.21■□□□□ 0.993e-12■□□□□ 10.8
CTSD-203ENST00000429746 DNAJC2Q99543 621 aaKnown RBP21.21■□□□□ 0.99
CTSD-203ENST00000429746 PAG1Q9NWQ8 432 aa21.21■□□□□ 0.99
CTSD-203ENST00000429746 AATFQ9NY61 560 aaKnown RBP eCLIP21.21■□□□□ 0.99
CTSD-203ENST00000429746 AK9Q5TCS8 1911 aa21.21■□□□□ 0.99
CTSD-203ENST00000429746 MAP4K4O95819 1239 aaPredicted RBP21.2■□□□□ 0.98
CTSD-203ENST00000429746 PDE6AP16499 860 aa21.2■□□□□ 0.98
CTSD-203ENST00000429746 MAP3K10Q02779 954 aa21.2■□□□□ 0.98
CTSD-203ENST00000429746 MAGEB6Q8N7X4 407 aa21.2■□□□□ 0.98
CTSD-203ENST00000429746 RIOK1Q9BRS2 568 aaKnown RBP21.2■□□□□ 0.98
CTSD-203ENST00000429746 UNCXA6NJT0 531 aa21.19■□□□□ 0.98
CTSD-203ENST00000429746 PPP1R12BO60237 982 aaPredicted RBP21.19■□□□□ 0.98
CTSD-203ENST00000429746 CYP7A1P22680 504 aa21.19■□□□□ 0.98
CTSD-203ENST00000429746 GJA5P36382 358 aa21.19■□□□□ 0.98
CTSD-203ENST00000429746 TTLL12Q14166 644 aaPredicted RBP21.18■□□□□ 0.98
CTSD-203ENST00000429746 TTF1Q15361 905 aaPredicted RBP21.18■□□□□ 0.98
CTSD-203ENST00000429746 CSRNP1Q96S65 589 aa21.18■□□□□ 0.98
CTSD-203ENST00000429746 ZNF112Q9UJU3 913 aa21.18■□□□□ 0.98
CTSD-203ENST00000429746 CAPN15O75808 1086 aa21.17■□□□□ 0.98
CTSD-203ENST00000429746 MAP3K12Q12852 859 aa21.17■□□□□ 0.98
CTSD-203ENST00000429746 ANKRD45Q5TZF3 282 aa21.17■□□□□ 0.98
CTSD-203ENST00000429746 TMED8Q6PL24 325 aaPredicted RBP21.17■□□□□ 0.98
CTSD-203ENST00000429746 MIGA1Q8NAN2 632 aa21.17■□□□□ 0.98
CTSD-203ENST00000429746 OSBPL5Q9H0X9 879 aaPredicted RBP21.17■□□□□ 0.98
CTSD-203ENST00000429746 TTC41PQ6P2S7 1318 aa21.17■□□□□ 0.98
CTSD-203ENST00000429746 MYH1P12882 1939 aa21.16■□□□□ 0.98
CTSD-203ENST00000429746 ZNF532Q9HCE3 1301 aa21.16■□□□□ 0.98
CTSD-203ENST00000429746 ADD2P35612 726 aa21.16■□□□□ 0.98
CTSD-203ENST00000429746 PICALMQ13492 652 aa21.16■□□□□ 0.98
CTSD-203ENST00000429746 SLC9C2Q5TAH2 1124 aa21.16■□□□□ 0.98
CTSD-203ENST00000429746 MIGA2Q7L4E1 593 aa21.16■□□□□ 0.98
CTSD-203ENST00000429746 TEX11Q8IYF3 940 aa21.16■□□□□ 0.98
CTSD-203ENST00000429746 RWDD1Q9H446 243 aaPredicted RBP21.16■□□□□ 0.98
CTSD-203ENST00000429746 STAP2Q9UGK3 403 aa21.16■□□□□ 0.98
CTSD-203ENST00000429746 TSKSQ9UJT2 592 aa21.16■□□□□ 0.98
CTSD-203ENST00000429746 SNCAIPQ9Y6H5 919 aa21.16■□□□□ 0.98
CTSD-203ENST00000429746 PHIPQ8WWQ0 1821 aa21.15■□□□□ 0.98
CTSD-203ENST00000429746 FLT1P17948 1338 aa21.15■□□□□ 0.98
CTSD-203ENST00000429746 PHF20L1A8MW92 1017 aa21.15■□□□□ 0.98
CTSD-203ENST00000429746 IREB2P48200 963 aaKnown RBP21.15■□□□□ 0.98
CTSD-203ENST00000429746 VGLL4Q14135 290 aa21.15■□□□□ 0.98
CTSD-203ENST00000429746 SPRYD7Q5W111 196 aa21.15■□□□□ 0.98
CTSD-203ENST00000429746 ANKRD13AQ8IZ07 590 aa21.15■□□□□ 0.98
CTSD-203ENST00000429746 CNKSR2Q8WXI2 1034 aa21.15■□□□□ 0.98
CTSD-203ENST00000429746 RNF186Q9NXI6 227 aa21.15■□□□□ 0.98
CTSD-203ENST00000429746 NAV1Q8NEY1 1877 aa21.14■□□□□ 0.97
CTSD-203ENST00000429746 MX1P20591 662 aa21.14■□□□□ 0.97
CTSD-203ENST00000429746 NUCB1Q02818 461 aa21.14■□□□□ 0.97
CTSD-203ENST00000429746 WNK4Q96J92 1243 aa21.14■□□□□ 0.97
CTSD-203ENST00000429746 BAG3O95817 575 aa21.13■□□□□ 0.97
CTSD-203ENST00000429746 INPP5BP32019 993 aa21.13■□□□□ 0.97
CTSD-203ENST00000429746 TM4SF4P48230 202 aa21.13■□□□□ 0.97
CTSD-203ENST00000429746 MAP3K9P80192 1104 aa21.13■□□□□ 0.97
CTSD-203ENST00000429746 ZKSCAN4Q969J2 545 aaPredicted RBP21.13■□□□□ 0.97
CTSD-203ENST00000429746 ABHD8Q96I13 439 aa21.13■□□□□ 0.97
CTSD-203ENST00000429746 DOCK1Q14185 1865 aa21.13■□□□□ 0.97
CTSD-203ENST00000429746 TRPA1O75762 1119 aa21.12■□□□□ 0.97
CTSD-203ENST00000429746 PLCG2P16885 1265 aa21.12■□□□□ 0.97
CTSD-203ENST00000429746 PDE1AP54750 535 aa21.12■□□□□ 0.97
CTSD-203ENST00000429746 RRP1BQ14684 758 aaKnown RBP21.12■□□□□ 0.97
CTSD-203ENST00000429746 METTL16Q86W50 562 aaKnown RBP21.12■□□□□ 0.97
CTSD-203ENST00000429746 MAPKAPK5Q8IW41 473 aa21.12■□□□□ 0.97
CTSD-203ENST00000429746 KBTBD3Q8NAB2 608 aa21.12■□□□□ 0.97
CTSD-203ENST00000429746 TGFBRAP1Q8WUH2 860 aa21.12■□□□□ 0.97
CTSD-203ENST00000429746 WRNIP1Q96S55 665 aa21.12■□□□□ 0.97
CTSD-203ENST00000429746 ZNF341Q9BYN7 854 aa21.12■□□□□ 0.97
CTSD-203ENST00000429746 LNPKQ9C0E8 428 aa21.12■□□□□ 0.97
CTSD-203ENST00000429746 DNAJC18Q9H819 358 aa21.12■□□□□ 0.97
CTSD-203ENST00000429746 ATAD5Q96QE3 1844 aa21.11■□□□□ 0.97
CTSD-203ENST00000429746 UBE3CQ15386 1083 aa21.11■□□□□ 0.97
CTSD-203ENST00000429746 DCAF15Q66K64 600 aa21.11■□□□□ 0.97
CTSD-203ENST00000429746 LCORLQ8N3X6 602 aa21.11■□□□□ 0.97
CTSD-203ENST00000429746 ELP3Q9H9T3 547 aa21.11■□□□□ 0.97
CTSD-203ENST00000429746 SPDYE5A6NIY4 337 aa21.1■□□□□ 0.97
CTSD-203ENST00000429746 FAM196BA6NMK8 535 aa21.1■□□□□ 0.97
CTSD-203ENST00000429746 TBC1D12O60347 775 aa21.1■□□□□ 0.97
CTSD-203ENST00000429746 GLRX3O76003 335 aaKnown RBP21.1■□□□□ 0.97
CTSD-203ENST00000429746 ZBTB48P10074 688 aaPredicted RBP21.1■□□□□ 0.97
CTSD-203ENST00000429746 INHBEP58166 350 aa21.1■□□□□ 0.97
CTSD-203ENST00000429746 SREBF2Q12772 1141 aa21.1■□□□□ 0.97
CTSD-203ENST00000429746 MKRN3Q13064 507 aaKnown RBP21.1■□□□□ 0.97
CTSD-203ENST00000429746 NOL9Q5SY16 702 aaKnown RBP21.1■□□□□ 0.97
CTSD-203ENST00000429746 B4GALNT3Q6L9W6 998 aa21.1■□□□□ 0.97
CTSD-203ENST00000429746 CHD1LQ86WJ1 897 aa21.1■□□□□ 0.97
CTSD-203ENST00000429746 HOOK2Q96ED9 719 aa21.1■□□□□ 0.97
CTSD-203ENST00000429746 SLC10A4Q96EP9 437 aa21.1■□□□□ 0.97
CTSD-203ENST00000429746 GPATCH3Q96I76 525 aa21.1■□□□□ 0.97
CTSD-203ENST00000429746 PTPRFP10586 1907 aa21.1■□□□□ 0.97
CTSD-203ENST00000429746 BAZ2AQ9UIF9 1905 aaKnown RBP21.1■□□□□ 0.97
CTSD-203ENST00000429746 EVX2Q03828 476 aa21.09■□□□□ 0.97
CTSD-203ENST00000429746 NOM1Q5C9Z4 860 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms