RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 BARX2Q9UMQ3 279 aaPredicted RBP4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 ATP1B4Q9UN42 357 aaPredicted RBP4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 N6AMT1Q9Y5N5 214 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 ERICH2A1L162 156 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 LRRIQ3A6PVS8 624 aaPredicted RBP4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 PPFIA3O75145 1194 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 ZNF189O75820 626 aaPredicted RBP4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 U2AF1L5P0DN76 240 aaPredicted RBP4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 INPP5BP32019 993 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 ABL2P42684 1182 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 U2AF1Q01081 240 aaKnown RBP eCLIP4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 PLOD1Q02809 727 aaPredicted RBP4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 SNW1Q13573 536 aaKnown RBP4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 NAA25Q14CX7 972 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 RBM43Q6ZSC3 357 aaKnown RBP4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 KLHDC4Q8TBB5 520 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 USP33Q8TEY7 942 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 UBXN4Q92575 508 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 FAM81BQ96LP2 452 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 ALS2CR12Q96Q35 445 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 PHOX2BQ99453 314 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 SRCIN1Q9C0H9 1055 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 FAM107BQ9H098 131 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 IRF2BPLQ9H1B7 796 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 VCPKMTQ9H867 229 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 ARFGAP3Q9NP61 516 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 GPCPD1Q9NPB8 672 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 TUBGCP4Q9UGJ1 667 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 RAB21Q9UL25 225 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 TPCN1Q9ULQ1 816 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 IQSEC3Q9UPP2 1182 aaPredicted RBP4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 TIMM22Q9Y584 194 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 SPO11Q9Y5K1 396 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 ATAD2Q6PL18 1390 aa4.99□□□□□ -1.61
R3HDM1-206ENST00000429703 CCDC151A5D8V7 595 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 IKBKBO14920 756 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 EIF2S2P20042 333 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 GNAQP50148 359 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 SLC30A9Q6PML9 568 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 GALNT15Q8N3T1 639 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 PAGR1Q9BTK6 254 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 NUP58Q9BVL2 599 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 BRD8Q9H0E9 1235 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 SENP2Q9HC62 589 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 POLR3EQ9NVU0 708 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 TPX2Q9ULW0 747 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 PIK3C2GO75747 1445 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 GPR75-ASB3A0A0A6YYF3 556 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 ST20-MTHFSA0A0A6YYL1 179 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 CCDC69A6NI79 296 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 MGRN1O60291 552 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 IBSPP21815 317 aaPredicted RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 STIP1P31948 543 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 SSTR3P32745 418 aaPredicted RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 AARSP49588 968 aaKnown RBP eCLIP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 CAPRIN2Q6IMN6 1127 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 SARM1Q6SZW1 724 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 SDCCAG8Q86SQ7 713 aaPredicted RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 PDCD7Q8N8D1 485 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 RETREG2Q8NC44 543 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 ANKK1Q8NFD2 765 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 FAM71BQ8TC56 605 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 TEKT1Q969V4 418 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 CENPOQ9BU64 300 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 KAT14Q9H8E8 782 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 SLC40A1Q9NP59 571 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 PLSCR2Q9NRY7 297 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 BMP2KQ9NSY1 1161 aaPredicted RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 TRIM35Q9UPQ4 493 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 ASB3Q9Y575 518 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 RDXP35241 583 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 UBE2HP62256 183 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 CCDC181Q5TID7 509 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 CHD1LQ86WJ1 897 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 SNRNP27Q8WVK2 155 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 YIPF3Q9GZM5 350 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 PAPOLBQ9NRJ5 636 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 PPIP5K1Q6PFW1 1433 aa4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 CHD2O14647 1828 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-206ENST00000429703 UPP2O95045 317 aa4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 RPSAP08865 295 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 IRAK1P51617 712 aa4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 CYP4A11Q02928 519 aa4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 NSUN2Q08J23 767 aaKnown RBP eCLIP4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 PRPF4BQ13523 1007 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 CLPPQ16740 277 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 ME3Q16798 604 aa4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 LRRFIP1Q32MZ4 808 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 SYNE3Q6ZMZ3 975 aa4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 C14orf80Q86SX3 495 aa4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 CCDC146Q8IYE0 955 aa4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 SAMD3Q8N6K7 520 aa4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 CXorf38Q8TB03 319 aa4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 KIFC2Q96AC6 838 aa4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 BEGAINQ9BUH8 593 aa4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 OXCT2Q9BYC2 517 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 CDHR5Q9HBB8 845 aa4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 BATF3Q9NR55 127 aa4.97□□□□□ -1.61
R3HDM1-206ENST00000429703 MYO1AQ9UBC5 1043 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms