RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 MYL10Q9BUA6 226 aa15.38■□□□□ 0.05
SNRNP200-202ENST00000429650 DOCK2Q92608 1830 aa15.38■□□□□ 0.05
SNRNP200-202ENST00000429650 PATL2C9JE40 543 aaKnown RBP15.38■□□□□ 0.05
SNRNP200-202ENST00000429650 NAA30Q147X3 362 aaPredicted RBP15.38■□□□□ 0.05
SNRNP200-202ENST00000429650 ISM2Q6H9L7 571 aa15.38■□□□□ 0.05
SNRNP200-202ENST00000429650 MROH5Q6ZUA9 1318 aa15.38■□□□□ 0.05
SNRNP200-202ENST00000429650 ERVV-1B6SEH8 477 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 LIFRP42702 1097 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 RESP18Q5W5W9 173 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 IFNL3Q8IZI9 196 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 SPATA5Q8NB90 893 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 MBD4O95243 580 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 LMOD1P29536 600 aaPredicted RBP15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 CTDSPL2Q05D32 466 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 TRIM29Q14134 588 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 MAGEB6Q8N7X4 407 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 SECISBP2LQ93073 1101 aaKnown RBP15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 NAPBQ9H115 298 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 HSD3B7Q9H2F3 369 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 ZSWIM5Q9P217 1185 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 TACC3Q9Y6A5 838 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 STK36Q9NRP7 1315 aa15.37■□□□□ 0.05
SNRNP200-202ENST00000429650 UBE2Q2LH0YL09 131 aa15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 FANCCQ00597 558 aa15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 RASGRF1Q13972 1273 aa15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 E4F1Q66K89 784 aaPredicted RBP15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 DZIP3Q86Y13 1208 aaKnown RBP15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 ZNF34Q8IZ26 560 aa15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 CLIC6Q96NY7 704 aa15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 PRDM10Q9NQV6 1147 aa15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 SLIT2O94813 1529 aa15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 TIAM2Q8IVF5 1701 aa15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 IFIT3O14879 490 aaKnown RBP15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 CHRM1P11229 460 aaPredicted RBP15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 SFPQP23246 707 aaKnown RBP eCLIP15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 BTG4Q9NY30 223 aa15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 SLC12A7Q9Y666 1083 aa15.36■□□□□ 0.05
SNRNP200-202ENST00000429650 DISP2A7MBM2 1401 aa15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 CUTAO60888 179 aa15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 ATP1A3P13637 1013 aa15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 SLC5A1P13866 664 aa15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 SSRP1Q08945 709 aaKnown RBP15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 MAP3K12Q12852 859 aa15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 PNOCQ13519 176 aa15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 SLC26A6Q9BXS9 759 aa15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 ARMT1Q9H993 441 aa15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 SPDYE4A6NLX3 237 aa15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 KIF2AO00139 706 aaPredicted RBP15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 FMNL1O95466 1100 aaPredicted RBP15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 IL6STP40189 918 aaPredicted RBP15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 KIF18AQ8NI77 898 aa15.35■□□□□ 0.05
SNRNP200-202ENST00000429650 GSG1L2A8MUP6 293 aa15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 SNAP23O00161 211 aa15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 KCNJ6P48051 423 aa15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 DHX8Q14562 1220 aaKnown RBP15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 AKNAD1Q5T1N1 836 aa15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 METTL16Q86W50 562 aaKnown RBP15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 CNPY4Q8N129 248 aa15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 CNNM2Q9H8M5 875 aa15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 CGNQ9P2M7 1197 aaKnown RBP15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 ZNF215Q9UL58 517 aaPredicted RBP15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 NID2Q14112 1375 aa15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 IFNAR1P17181 557 aa15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 PPP1R13BQ96KQ4 1090 aa15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 GOLGB1Q14789 3259 aaKnown RBP15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 NHSL1Q5SYE7 1610 aa15.34■□□□□ 0.05
SNRNP200-202ENST00000429650 PSDA5PKW4 1024 aaPredicted RBP15.33■□□□□ 0.05
SNRNP200-202ENST00000429650 ZSCAN20P17040 1043 aaPredicted RBP15.33■□□□□ 0.05
SNRNP200-202ENST00000429650 MYL5Q02045 173 aa15.33■□□□□ 0.05
SNRNP200-202ENST00000429650 LONRF3Q496Y0 759 aa15.33■□□□□ 0.05
SNRNP200-202ENST00000429650 AK7Q96M32 723 aa15.33■□□□□ 0.05
SNRNP200-202ENST00000429650 FEZ1Q99689 392 aa15.33■□□□□ 0.05
SNRNP200-202ENST00000429650 KRT23Q9C075 422 aa15.33■□□□□ 0.05
SNRNP200-202ENST00000429650 KRBA2Q6ZNG9 492 aa15.33■□□□□ 0.04
SNRNP200-202ENST00000429650 MFSD6Q6ZSS7 791 aa15.33■□□□□ 0.04
SNRNP200-202ENST00000429650 NOSTRINQ8IVI9 506 aa15.33■□□□□ 0.04
SNRNP200-202ENST00000429650 SYTL4Q96C24 671 aaPredicted RBP15.33■□□□□ 0.04
SNRNP200-202ENST00000429650 KCNH3Q9ULD8 1083 aa15.33■□□□□ 0.04
SNRNP200-202ENST00000429650 PRKAB2O43741 272 aa15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 GUCY1A2P33402 732 aa15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 FOXP4Q8IVH2 680 aaPredicted RBP15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 CNNM3Q8NE01 707 aa15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 WASF1Q92558 559 aa15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 PRDM4Q9UKN5 801 aa15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 BTBD18B2RXH4 712 aa15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 MMP1P03956 469 aa15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 LCORLQ8N3X6 602 aa15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 KRI1Q8N9T8 703 aaKnown RBP15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 STAG1Q8WVM7 1258 aa15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 DPF2Q92785 391 aa15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 BCORQ6W2J9 1755 aa15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 ZNF335Q9H4Z2 1342 aaPredicted RBP15.32■□□□□ 0.04
SNRNP200-202ENST00000429650 A0A0G2JS52 829 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 NRDCO43847 1150 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 TOB1P50616 345 aaPredicted RBP15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 UBASH3AP57075 661 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 RRP12Q5JTH9 1297 aaKnown RBP15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 SUSD4Q5VX71 490 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms