RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 NBPF12Q5TAG4 269 aaPredicted RBP17.98■□□□□ 0.47
GARNL3-204ENST00000429629 METTL16Q86W50 562 aaKnown RBP17.98■□□□□ 0.47
GARNL3-204ENST00000429629 TGFBRAP1Q8WUH2 860 aa17.98■□□□□ 0.47
GARNL3-204ENST00000429629 USP5P45974 858 aa17.97■□□□□ 0.47
GARNL3-204ENST00000429629 TCP10Q12799 353 aa17.97■□□□□ 0.47
GARNL3-204ENST00000429629 MCMDC2Q4G0Z9 681 aa17.97■□□□□ 0.47
GARNL3-204ENST00000429629 FOXP4Q8IVH2 680 aaPredicted RBP17.97■□□□□ 0.47
GARNL3-204ENST00000429629 ZFPM1Q8IX07 1006 aa17.97■□□□□ 0.47
GARNL3-204ENST00000429629 LCORLQ8N3X6 602 aa17.97■□□□□ 0.47
GARNL3-204ENST00000429629 GBA2Q9HCG7 927 aaPredicted RBP17.97■□□□□ 0.47
GARNL3-204ENST00000429629 PI4KBQ9UBF8 816 aa17.97■□□□□ 0.47
GARNL3-204ENST00000429629 FLT1P17948 1338 aa17.97■□□□□ 0.47
GARNL3-204ENST00000429629 CHGBP05060 677 aa17.96■□□□□ 0.47
GARNL3-204ENST00000429629 MFAP1P55081 439 aaKnown RBP17.96■□□□□ 0.47
GARNL3-204ENST00000429629 FMR1Q06787 632 aaKnown RBP eCLIP17.96■□□□□ 0.47
GARNL3-204ENST00000429629 SLFNL1Q499Z3 407 aa17.96■□□□□ 0.47
GARNL3-204ENST00000429629 PRAMEF18Q5VWM3 479 aa17.96■□□□□ 0.47
GARNL3-204ENST00000429629 DCAF15Q66K64 600 aa17.96■□□□□ 0.47
GARNL3-204ENST00000429629 SH3BP5LQ7L8J4 393 aa17.96■□□□□ 0.47
GARNL3-204ENST00000429629 ARMC9Q7Z3E5 817 aa17.96■□□□□ 0.47
GARNL3-204ENST00000429629 ARMT1Q9H993 441 aa17.96■□□□□ 0.47
GARNL3-204ENST00000429629 DCP1AQ9NPI6 582 aaPredicted RBP17.96■□□□□ 0.47
GARNL3-204ENST00000429629 SCAF8Q9UPN6 1271 aaKnown RBP17.96■□□□□ 0.47
GARNL3-204ENST00000429629 TLL2Q9Y6L7 1015 aa17.96■□□□□ 0.47
GARNL3-204ENST00000429629 DOCK2Q92608 1830 aa17.95■□□□□ 0.46
GARNL3-204ENST00000429629 PATL2C9JE40 543 aaKnown RBP17.95■□□□□ 0.46
GARNL3-204ENST00000429629 GPAA1O43292 621 aa17.95■□□□□ 0.46
GARNL3-204ENST00000429629 PICALMQ13492 652 aa17.95■□□□□ 0.46
GARNL3-204ENST00000429629 LDLRAD1Q5T700 205 aa17.95■□□□□ 0.46
GARNL3-204ENST00000429629 DLK2Q6UY11 383 aa17.95■□□□□ 0.46
GARNL3-204ENST00000429629 TTC6Q86TZ1 520 aa17.95■□□□□ 0.46
GARNL3-204ENST00000429629 SAPCD2Q86UD0 394 aa17.95■□□□□ 0.46
GARNL3-204ENST00000429629 DDRGK1Q96HY6 314 aa17.95■□□□□ 0.46
GARNL3-204ENST00000429629 CSRNP1Q96S65 589 aa17.95■□□□□ 0.46
GARNL3-204ENST00000429629 HERC5Q9UII4 1024 aaKnown RBP17.95■□□□□ 0.46
GARNL3-204ENST00000429629 MAST2Q6P0Q8 1798 aa17.94■□□□□ 0.46
GARNL3-204ENST00000429629 DDTLA6NHG4 134 aaPredicted RBP17.94■□□□□ 0.46
GARNL3-204ENST00000429629 MAPKAPK5Q8IW41 473 aa17.94■□□□□ 0.46
GARNL3-204ENST00000429629 ZSCAN29Q8IWY8 852 aaPredicted RBP17.94■□□□□ 0.46
GARNL3-204ENST00000429629 EHD4Q9H223 541 aa17.94■□□□□ 0.46
GARNL3-204ENST00000429629 DIAPH3Q9NSV4 1193 aa17.94■□□□□ 0.46
GARNL3-204ENST00000429629 ZNF112Q9UJU3 913 aa17.94■□□□□ 0.46
GARNL3-204ENST00000429629 SLC4A4Q9Y6R1 1079 aa17.94■□□□□ 0.46
GARNL3-204ENST00000429629 RASSF10A6NK89 507 aa17.93■□□□□ 0.46
GARNL3-204ENST00000429629 GSG1L2A8MUP6 293 aa17.93■□□□□ 0.46
GARNL3-204ENST00000429629 USP2O75604 605 aaPredicted RBP17.93■□□□□ 0.46
GARNL3-204ENST00000429629 HLA-DOAP06340 250 aa17.93■□□□□ 0.46
GARNL3-204ENST00000429629 IREB2P48200 963 aaKnown RBP17.93■□□□□ 0.46
GARNL3-204ENST00000429629 SBK1Q52WX2 424 aa17.93■□□□□ 0.46
GARNL3-204ENST00000429629 RUFY2Q8WXA3 655 aa17.93■□□□□ 0.46
GARNL3-204ENST00000429629 KLRG1Q96E93 195 aa17.93■□□□□ 0.46
GARNL3-204ENST00000429629 ZNF408Q9H9D4 720 aa17.93■□□□□ 0.46
GARNL3-204ENST00000429629 MYH2Q9UKX2 1941 aa17.93■□□□□ 0.46
GARNL3-204ENST00000429629 M0R2C6 588 aa17.92■□□□□ 0.46
GARNL3-204ENST00000429629 CHMLP26374 656 aa17.92■□□□□ 0.46
GARNL3-204ENST00000429629 NMIQ13287 307 aaPredicted RBP17.92■□□□□ 0.46
GARNL3-204ENST00000429629 ALX1Q15699 326 aa17.92■□□□□ 0.46
GARNL3-204ENST00000429629 CDAN1Q8IWY9 1227 aa17.92■□□□□ 0.46
GARNL3-204ENST00000429629 FAM227BQ96M60 508 aa17.92■□□□□ 0.46
GARNL3-204ENST00000429629 SEC62Q99442 399 aaKnown RBP17.92■□□□□ 0.46
GARNL3-204ENST00000429629 ZNF341Q9BYN7 854 aa17.92■□□□□ 0.46
GARNL3-204ENST00000429629 NACAP1Q9BZK3 213 aa17.92■□□□□ 0.46
GARNL3-204ENST00000429629 RAD50Q92878 1312 aa17.92■□□□□ 0.46
GARNL3-204ENST00000429629 A0A0D9SFI3 127 aa17.91■□□□□ 0.46
GARNL3-204ENST00000429629 PRKAB2O43741 272 aa17.91■□□□□ 0.46
GARNL3-204ENST00000429629 MAP3K9P80192 1104 aa17.91■□□□□ 0.46
GARNL3-204ENST00000429629 AMOTL1Q8IY63 956 aa17.91■□□□□ 0.46
GARNL3-204ENST00000429629 ANKRD13AQ8IZ07 590 aa17.91■□□□□ 0.46
GARNL3-204ENST00000429629 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.91■□□□□ 0.46
GARNL3-204ENST00000429629 SDR42E1Q8WUS8 393 aa17.91■□□□□ 0.46
GARNL3-204ENST00000429629 GINM1Q9NU53 330 aa17.91■□□□□ 0.46
GARNL3-204ENST00000429629 PALD1Q9ULE6 856 aa17.91■□□□□ 0.46
GARNL3-204ENST00000429629 HUNKP57058 714 aa17.9■□□□□ 0.46
GARNL3-204ENST00000429629 C12orf60Q5U649 245 aa17.9■□□□□ 0.46
GARNL3-204ENST00000429629 CWC27Q6UX04 472 aaKnown RBP17.9■□□□□ 0.46
GARNL3-204ENST00000429629 MCM9Q9NXL9 1143 aa17.9■□□□□ 0.46
GARNL3-204ENST00000429629 ARPP21Q9UBL0 812 aaPredicted RBP17.9■□□□□ 0.46
GARNL3-204ENST00000429629 SERPINB13Q9UIV8 391 aa17.9■□□□□ 0.46
GARNL3-204ENST00000429629 ANGEL1Q9UNK9 670 aaKnown RBP17.9■□□□□ 0.46
GARNL3-204ENST00000429629 SSC5DA1L4H1 1573 aa17.9■□□□□ 0.46
GARNL3-204ENST00000429629 ECM29Q5VYK3 1845 aa17.89■□□□□ 0.45
GARNL3-204ENST00000429629 PHF20L1A8MW92 1017 aa17.89■□□□□ 0.45
GARNL3-204ENST00000429629 POLR3DP05423 398 aaPredicted RBP17.89■□□□□ 0.45
GARNL3-204ENST00000429629 GABPAQ06546 454 aa17.89■□□□□ 0.45
GARNL3-204ENST00000429629 TTLL12Q14166 644 aaPredicted RBP17.89■□□□□ 0.45
GARNL3-204ENST00000429629 DEFB115Q30KQ5 88 aa17.89■□□□□ 0.45
GARNL3-204ENST00000429629 CTR9Q6PD62 1173 aa17.89■□□□□ 0.45
GARNL3-204ENST00000429629 IFNL3Q8IZI9 196 aa17.89■□□□□ 0.45
GARNL3-204ENST00000429629 CCDC102AQ96A19 550 aa17.89■□□□□ 0.45
GARNL3-204ENST00000429629 ABT1Q9ULW3 272 aaKnown RBP17.89■□□□□ 0.45
GARNL3-204ENST00000429629 CCDC171Q6TFL3 1326 aa17.89■□□□□ 0.45
GARNL3-204ENST00000429629 USP17L12C9JPN9 530 aa17.88■□□□□ 0.45
GARNL3-204ENST00000429629 USP17L21D6R901 530 aa17.88■□□□□ 0.45
GARNL3-204ENST00000429629 UBE2Q2LH0YL09 131 aa17.88■□□□□ 0.45
GARNL3-204ENST00000429629 CTNND1O60716 968 aaKnown RBP17.88■□□□□ 0.45
GARNL3-204ENST00000429629 RGMBQ6NW40 437 aa17.88■□□□□ 0.45
GARNL3-204ENST00000429629 MIGA2Q7L4E1 593 aa17.88■□□□□ 0.45
GARNL3-204ENST00000429629 SKAP1Q86WV1 359 aa17.88■□□□□ 0.45
GARNL3-204ENST00000429629 ZMYM6O95789 1325 aa17.88■□□□□ 0.45
GARNL3-204ENST00000429629 SGSM2O43147 1006 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms