RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 NTRK3Q16288 839 aa18.89■□□□□ 0.61
MBD4-203ENST00000429544 MYSM1Q5VVJ2 828 aa18.89■□□□□ 0.61
MBD4-203ENST00000429544 FSIP1Q8NA03 581 aa18.89■□□□□ 0.61
MBD4-203ENST00000429544 HIBADHP31937 336 aaKnown RBP18.89■□□□□ 0.61
MBD4-203ENST00000429544 IARSP41252 1262 aaKnown RBP18.89■□□□□ 0.61
MBD4-203ENST00000429544 CHAF1AQ13111 956 aaPredicted RBP18.89■□□□□ 0.61
MBD4-203ENST00000429544 SART3Q15020 963 aaKnown RBP18.89■□□□□ 0.61
MBD4-203ENST00000429544 STK38Q15208 465 aa18.89■□□□□ 0.61
MBD4-203ENST00000429544 ANO6Q4KMQ2 910 aa18.89■□□□□ 0.61
MBD4-203ENST00000429544 SYNE3Q6ZMZ3 975 aa18.89■□□□□ 0.61
MBD4-203ENST00000429544 FAM200AQ8TCP9 573 aa18.89■□□□□ 0.61
MBD4-203ENST00000429544 MYH2Q9UKX2 1941 aa18.88■□□□□ 0.61
MBD4-203ENST00000429544 SMIM22K7EJ46 135 aa18.88■□□□□ 0.61
MBD4-203ENST00000429544 SEPT12Q8IYM1 358 aa18.88■□□□□ 0.61
MBD4-203ENST00000429544 PCDHA7Q9UN72 937 aa18.88■□□□□ 0.61
MBD4-203ENST00000429544 MAST2Q6P0Q8 1798 aa18.88■□□□□ 0.61
MBD4-203ENST00000429544 KRT40Q6A162 431 aa18.88■□□□□ 0.61
MBD4-203ENST00000429544 SASS6Q6UVJ0 657 aa18.88■□□□□ 0.61
MBD4-203ENST00000429544 LINC00301Q8NCQ3 95 aa18.88■□□□□ 0.61
MBD4-203ENST00000429544 ZKSCAN5Q9Y2L8 839 aa18.88■□□□□ 0.61
MBD4-203ENST00000429544 CCDC88AQ3V6T2 1871 aa18.87■□□□□ 0.61
MBD4-203ENST00000429544 ERICH2A1L162 156 aa18.87■□□□□ 0.61
MBD4-203ENST00000429544 NFIXQ14938 502 aa18.87■□□□□ 0.61
MBD4-203ENST00000429544 SLC26A6Q9BXS9 759 aa18.87■□□□□ 0.61
MBD4-203ENST00000429544 CYP2D7A0A087X1C5 515 aa18.86■□□□□ 0.61
MBD4-203ENST00000429544 AP5Z1O43299 807 aa18.86■□□□□ 0.61
MBD4-203ENST00000429544 SNW1Q13573 536 aaKnown RBP18.86■□□□□ 0.61
MBD4-203ENST00000429544 SF3A1Q15459 793 aaKnown RBP18.86■□□□□ 0.61
MBD4-203ENST00000429544 SLC51AQ86UW1 340 aa18.86■□□□□ 0.61
MBD4-203ENST00000429544 NSUN4Q96CB9 384 aaKnown RBP18.86■□□□□ 0.61
MBD4-203ENST00000429544 LRRC4BQ9NT99 713 aa18.86■□□□□ 0.61
MBD4-203ENST00000429544 POLR3EQ9NVU0 708 aa18.86■□□□□ 0.61
MBD4-203ENST00000429544 ANAPC4Q9UJX5 808 aa18.86■□□□□ 0.61
MBD4-203ENST00000429544 NID2Q14112 1375 aa18.86■□□□□ 0.61
MBD4-203ENST00000429544 DUOX1Q9NRD9 1551 aa18.86■□□□□ 0.61
MBD4-203ENST00000429544 UBE2Q2LH0YL09 131 aa18.86■□□□□ 0.61
MBD4-203ENST00000429544 YEATS4O95619 227 aa18.86■□□□□ 0.61
MBD4-203ENST00000429544 MECOMQ03112 1051 aa18.86■□□□□ 0.61
MBD4-203ENST00000429544 FAM160A1Q05DH4 1040 aa18.86■□□□□ 0.61
MBD4-203ENST00000429544 SSRP1Q08945 709 aaKnown RBP18.86■□□□□ 0.61
MBD4-203ENST00000429544 MPNDQ8N594 471 aa18.86■□□□□ 0.61
MBD4-203ENST00000429544 LUZP1Q86V48 1076 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 TXNRD3Q86VQ6 643 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 RGS22Q8NE09 1264 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 ENGASEQ8NFI3 743 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 KCNG4Q8TDN1 519 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 MRPS27Q92552 414 aaKnown RBP18.85■□□□□ 0.61
MBD4-203ENST00000429544 UBAC1Q9BSL1 405 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 BRIP1Q9BX63 1249 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 CBX8Q9HC52 389 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 JAG2Q9Y219 1238 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 PDS5AQ29RF7 1337 aaKnown RBP18.85■□□□□ 0.61
MBD4-203ENST00000429544 STK36Q9NRP7 1315 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 UBR3Q6ZT12 1888 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 SPTLC2O15270 562 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 KINO60870 393 aaKnown RBP18.85■□□□□ 0.61
MBD4-203ENST00000429544 HSPA1LP34931 641 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 RTN1Q16799 776 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 CNBD1Q8NA66 436 aa18.85■□□□□ 0.61
MBD4-203ENST00000429544 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.84■□□□□ 0.61
MBD4-203ENST00000429544 FMNL1O95466 1100 aaPredicted RBP18.84■□□□□ 0.61
MBD4-203ENST00000429544 GNL2Q13823 731 aaKnown RBP18.84■□□□□ 0.61
MBD4-203ENST00000429544 TRIM29Q14134 588 aa18.84■□□□□ 0.61
MBD4-203ENST00000429544 ANO1Q5XXA6 986 aa18.84■□□□□ 0.61
MBD4-203ENST00000429544 ADALQ6DHV7 355 aa18.84■□□□□ 0.61
MBD4-203ENST00000429544 ESR2Q92731 530 aa18.84■□□□□ 0.61
MBD4-203ENST00000429544 TRPC5Q9UL62 973 aaPredicted RBP18.84■□□□□ 0.61
MBD4-203ENST00000429544 PRDX5P30044 214 aa18.84■□□□□ 0.61
MBD4-203ENST00000429544 MTA3Q9BTC8 594 aa18.84■□□□□ 0.61
MBD4-203ENST00000429544 BCL11BQ9C0K0 894 aaPredicted RBP18.84■□□□□ 0.61
MBD4-203ENST00000429544 DNAJC25Q9H1X3 360 aa18.84■□□□□ 0.61
MBD4-203ENST00000429544 LAMB1P07942 1786 aa18.84■□□□□ 0.61
MBD4-203ENST00000429544 MYH6P13533 1939 aa18.83■□□□□ 0.61
MBD4-203ENST00000429544 CTAGE5O15320 804 aa18.83■□□□□ 0.61
MBD4-203ENST00000429544 ONECUT3O60422 494 aaPredicted RBP18.83■□□□□ 0.61
MBD4-203ENST00000429544 IFNAR1P17181 557 aa18.83■□□□□ 0.61
MBD4-203ENST00000429544 ZNF654Q8IZM8 581 aa18.83■□□□□ 0.61
MBD4-203ENST00000429544 AATFQ9NY61 560 aaKnown RBP eCLIP18.83■□□□□ 0.61
MBD4-203ENST00000429544 TNKSO95271 1327 aa18.83■□□□□ 0.61
MBD4-203ENST00000429544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.83■□□□□ 0.6
MBD4-203ENST00000429544 A0A1B0GVL5 298 aa18.83■□□□□ 0.6
MBD4-203ENST00000429544 A0A1W2PQ27 194 aa18.83■□□□□ 0.6
MBD4-203ENST00000429544 A0A1W2PQ64 194 aa18.83■□□□□ 0.6
MBD4-203ENST00000429544 A0A1W2PQD8 194 aa18.83■□□□□ 0.6
MBD4-203ENST00000429544 GRAPQ13588 217 aa18.83■□□□□ 0.6
MBD4-203ENST00000429544 TMTC2Q8N394 836 aa18.83■□□□□ 0.6
MBD4-203ENST00000429544 GRAPLQ8TC17 118 aaPredicted RBP18.83■□□□□ 0.6
MBD4-203ENST00000429544 NUP133Q8WUM0 1156 aa18.83■□□□□ 0.6
MBD4-203ENST00000429544 ANKIB1Q9P2G1 1089 aa18.83■□□□□ 0.6
MBD4-203ENST00000429544 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.83■□□□□ 0.6
MBD4-203ENST00000429544 IRS2Q9Y4H2 1338 aa18.83■□□□□ 0.6
MBD4-203ENST00000429544 GUCY1A2P33402 732 aa18.82■□□□□ 0.6
MBD4-203ENST00000429544 SEC23AQ15436 765 aa18.82■□□□□ 0.6
MBD4-203ENST00000429544 CTR9Q6PD62 1173 aa18.82■□□□□ 0.6
MBD4-203ENST00000429544 FMR1NBQ8N0W7 255 aaPredicted RBP18.82■□□□□ 0.6
MBD4-203ENST00000429544 PRDM1O75626 825 aa18.81■□□□□ 0.6
MBD4-203ENST00000429544 NDUFA8P51970 172 aa18.81■□□□□ 0.6
MBD4-203ENST00000429544 CMTR1Q8N1G2 835 aaKnown RBP18.81■□□□□ 0.6
MBD4-203ENST00000429544 CCDC82Q8N4S0 544 aa18.81■□□□□ 0.6
MBD4-203ENST00000429544 DLEC1Q9Y238 1755 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms