RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 LEO1Q8WVC0 666 aaPredicted RBP14.31□□□□□ -0.12
LDB3-205ENST00000429277 FAM204AQ9H8W3 233 aa14.31□□□□□ -0.12
LDB3-205ENST00000429277 STK10O94804 968 aaKnown RBP14.31□□□□□ -0.12
LDB3-205ENST00000429277 ERCC6LQ2NKX8 1250 aa14.31□□□□□ -0.12
LDB3-205ENST00000429277 FAM76AQ8TAV0 307 aa14.31□□□□□ -0.12
LDB3-205ENST00000429277 LZTFL1Q9NQ48 299 aa14.31□□□□□ -0.12
LDB3-205ENST00000429277 CCDC114Q96M63 670 aa14.31□□□□□ -0.12
LDB3-205ENST00000429277 ATP2C2O75185 946 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 GIGYF1O75420 1035 aaPredicted RBP14.3□□□□□ -0.12
LDB3-205ENST00000429277 EDC4Q6P2E9 1401 aaKnown RBP14.3□□□□□ -0.12
LDB3-205ENST00000429277 ZNF790Q6PG37 636 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 NUCKS1Q9H1E3 243 aaKnown RBP14.3□□□□□ -0.12
LDB3-205ENST00000429277 FAM184BQ9ULE4 1060 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 SPOPO43791 374 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 NOL3O60936 208 aaKnown RBP14.3□□□□□ -0.12
LDB3-205ENST00000429277 ITGA6P23229 1130 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 PPP1R9BQ96SB3 815 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 CCDC94Q9BW85 323 aaPredicted RBP14.3□□□□□ -0.12
LDB3-205ENST00000429277 UFL1O94874 794 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 PSMC4P43686 418 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 DPH6Q7L8W6 267 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 SMC1BQ8NDV3 1235 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 TSKSQ9UJT2 592 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 KCNH3Q9ULD8 1083 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 GNPATO15228 680 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 TBC1D22AQ8WUA7 517 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 LPIN2Q92539 896 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 CAPZA3Q96KX2 299 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 ZNF830Q96NB3 372 aaPredicted RBP14.3□□□□□ -0.12
LDB3-205ENST00000429277 A0A1W2PP64 1363 aa14.3□□□□□ -0.12
LDB3-205ENST00000429277 ARHGEF35A5YM69 484 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 FBLN1P23142 703 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 RBM26Q5T8P6 1007 aaKnown RBP14.29□□□□□ -0.12
LDB3-205ENST00000429277 NAPGQ99747 312 aaPredicted RBP14.29□□□□□ -0.12
LDB3-205ENST00000429277 IMPACTQ9P2X3 320 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 TRPC3Q13507 836 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 KARSQ15046 597 aaKnown RBP14.29□□□□□ -0.12
LDB3-205ENST00000429277 NONOQ15233 471 aaKnown RBP eCLIP14.29□□□□□ -0.12
LDB3-205ENST00000429277 ZNF174Q15697 407 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 CHST3Q7LGC8 479 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 STK32BQ9NY57 414 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 SWAP70Q9UH65 585 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 MAP3K19Q56UN5 1328 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 MROH5Q6ZUA9 1318 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 RIMBP2O15034 1052 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 IGSF22Q8N9C0 903 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 IFT81Q8WYA0 676 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 ERO1AQ96HE7 468 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 AGTPBP1Q9UPW5 1226 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 AFAP1L2Q8N4X5 818 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 TSPYL6Q8N831 410 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 PPFIBP2Q8ND30 876 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 ZBTB21Q9ULJ3 1066 aa14.29□□□□□ -0.12
LDB3-205ENST00000429277 EIF4G3O43432 1585 aaKnown RBP14.29□□□□□ -0.12
LDB3-205ENST00000429277 KRT5P13647 590 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 ASIC2Q16515 512 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 SYT10Q6XYQ8 523 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 ZBTB7BO15156 539 aaPredicted RBP14.28□□□□□ -0.12
LDB3-205ENST00000429277 FCHSD1Q86WN1 690 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 ZKSCAN3Q9BRR0 538 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 SLC27A2O14975 620 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 PAK1Q13153 545 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 MAIP1Q8WWC4 291 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 KIFC2Q96AC6 838 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 KCNK9Q9NPC2 374 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 ZRANB1Q9UGI0 708 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 KIF24Q5T7B8 1368 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 ADCY7P51828 1080 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 LACTBP83111 547 aaPredicted RBP14.28□□□□□ -0.12
LDB3-205ENST00000429277 SLC9C1Q4G0N8 1177 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 TTC38Q5R3I4 469 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 ZNF365Q70YC5 407 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 KBTBD3Q8NAB2 608 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 CTNND2Q9UQB3 1225 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 TMTC1Q8IUR5 882 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 CSGALNACT2Q8N6G5 542 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 CCT6BQ92526 530 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 IVNS1ABPQ9Y6Y0 642 aa14.28□□□□□ -0.12
LDB3-205ENST00000429277 TLDC2A0PJX2 215 aa14.27□□□□□ -0.12
LDB3-205ENST00000429277 B4E1Z4 1266 aa14.27□□□□□ -0.12
LDB3-205ENST00000429277 INTS8Q75QN2 995 aaKnown RBP14.27□□□□□ -0.12
LDB3-205ENST00000429277 TAOK1Q7L7X3 1001 aa14.27□□□□□ -0.12
LDB3-205ENST00000429277 CCDC84Q86UT8 332 aaPredicted RBP14.27□□□□□ -0.12
LDB3-205ENST00000429277 CCDC25Q86WR0 208 aa14.27□□□□□ -0.12
LDB3-205ENST00000429277 SYCE1Q8N0S2 351 aa14.27□□□□□ -0.12
LDB3-205ENST00000429277 CLSTN2Q9H4D0 955 aa14.27□□□□□ -0.12
LDB3-205ENST00000429277 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.27□□□□□ -0.12
LDB3-205ENST00000429277 PNMA2Q9UL42 364 aa14.27□□□□□ -0.12
LDB3-205ENST00000429277 E7EVH7 732 aa14.27□□□□□ -0.12
LDB3-205ENST00000429277 FYB2Q5VWT5 728 aa14.27□□□□□ -0.12
LDB3-205ENST00000429277 XAGE2Q96GT9 111 aa14.27□□□□□ -0.12
LDB3-205ENST00000429277 SYNRGQ9UMZ2 1314 aa14.27□□□□□ -0.13
LDB3-205ENST00000429277 TCOF1Q13428 1488 aaKnown RBP14.27□□□□□ -0.13
LDB3-205ENST00000429277 ZBED4O75132 1171 aa14.27□□□□□ -0.13
LDB3-205ENST00000429277 B4GALNT4Q76KP1 1039 aa14.27□□□□□ -0.13
LDB3-205ENST00000429277 IWS1Q96ST2 819 aa14.27□□□□□ -0.13
LDB3-205ENST00000429277 A0A1B0GVL5 298 aa14.27□□□□□ -0.13
LDB3-205ENST00000429277 GPHNQ9NQX3 736 aaPredicted RBP14.27□□□□□ -0.13
LDB3-205ENST00000429277 CCNL1Q9UK58 526 aaPredicted RBP14.27□□□□□ -0.13
LDB3-205ENST00000429277 UTP11Q9Y3A2 253 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms