RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 RASSF7Q02833 373 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 CTDSPL2Q05D32 466 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 CXCL9Q07325 125 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 CIAPIN1Q6FI81 312 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 MFSD6Q6ZSS7 791 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 TBC1D10CQ8IV04 446 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 AMOTL1Q8IY63 956 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 TGFBRAP1Q8WUH2 860 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 STAG1Q8WVM7 1258 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 GMLQ99445 158 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 KRT23Q9C075 422 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 LIMCH1Q9UPQ0 1083 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 WDR19Q8NEZ3 1342 aa15.05■□□□□ -0
HMGB3P4-201ENST00000428776 SLC3A2P08195 630 aaKnown RBP15.04■□□□□ -0
HMGB3P4-201ENST00000428776 APOBEC3HQ6NTF7 200 aaKnown RBP15.04■□□□□ -0
HMGB3P4-201ENST00000428776 ARHGAP27Q6ZUM4 889 aa15.04■□□□□ -0
HMGB3P4-201ENST00000428776 MB21D2Q8IYB1 491 aaPredicted RBP15.04■□□□□ -0
HMGB3P4-201ENST00000428776 FBXL16Q8N461 479 aa15.04■□□□□ -0
HMGB3P4-201ENST00000428776 TMX3Q96JJ7 454 aa15.04■□□□□ -0
HMGB3P4-201ENST00000428776 ZSCAN31Q96LW9 406 aaPredicted RBP15.04■□□□□ -0
HMGB3P4-201ENST00000428776 USP40Q9NVE5 1235 aa15.04■□□□□ -0
HMGB3P4-201ENST00000428776 MCM9Q9NXL9 1143 aa15.04■□□□□ -0
HMGB3P4-201ENST00000428776 HDAC9Q9UKV0 1011 aa15.04■□□□□ -0
HMGB3P4-201ENST00000428776 HSP90AA1P07900 732 aaKnown RBP15.03■□□□□ -0
HMGB3P4-201ENST00000428776 RBM5P52756 815 aaKnown RBP eCLIP15.03■□□□□ -0
HMGB3P4-201ENST00000428776 COL9A3Q14050 684 aaPredicted RBP15.03■□□□□ -0
HMGB3P4-201ENST00000428776 CDC42EP5Q6NZY7 148 aa15.03■□□□□ -0
HMGB3P4-201ENST00000428776 Q6ZUG5 572 aa15.03■□□□□ -0
HMGB3P4-201ENST00000428776 OGFOD1Q8N543 542 aa15.03■□□□□ -0
HMGB3P4-201ENST00000428776 FLT1P17948 1338 aa15.02■□□□□ -0
HMGB3P4-201ENST00000428776 NEDD4P46934 1319 aa15.02■□□□□ -0
HMGB3P4-201ENST00000428776 FZD9O00144 591 aa15.02■□□□□ -0
HMGB3P4-201ENST00000428776 FGRP09769 529 aa15.02■□□□□ -0
HMGB3P4-201ENST00000428776 USP17L8P0C7I0 530 aa15.02■□□□□ -0
HMGB3P4-201ENST00000428776 RPS12P25398 132 aaKnown RBP15.02■□□□□ -0
HMGB3P4-201ENST00000428776 PRELPP51888 382 aa15.02■□□□□ -0
HMGB3P4-201ENST00000428776 FGD1P98174 961 aa15.02■□□□□ -0
HMGB3P4-201ENST00000428776 TOB2Q14106 344 aaPredicted RBP15.02■□□□□ -0
HMGB3P4-201ENST00000428776 C12orf60Q5U649 245 aa15.02■□□□□ -0
HMGB3P4-201ENST00000428776 MAPKAPK5Q8IW41 473 aa15.02■□□□□ -0
HMGB3P4-201ENST00000428776 TCEANC2Q96MN5 208 aa15.02■□□□□ -0
HMGB3P4-201ENST00000428776 AGXT2Q9BYV1 514 aa15.02■□□□□ -0
HMGB3P4-201ENST00000428776 SH2B1Q9NRF2 756 aaPredicted RBP15.02■□□□□ -0
HMGB3P4-201ENST00000428776 ROBO3Q96MS0 1386 aa15.01□□□□□ -0.01
HMGB3P4-201ENST00000428776 CYP2D7A0A087X1C5 515 aa15.01□□□□□ -0.01
HMGB3P4-201ENST00000428776 PRC1O43663 620 aa15.01□□□□□ -0.01
HMGB3P4-201ENST00000428776 POLR3DP05423 398 aaPredicted RBP15.01□□□□□ -0.01
HMGB3P4-201ENST00000428776 LMNB1P20700 586 aa15.01□□□□□ -0.01
HMGB3P4-201ENST00000428776 NT5C2P49902 561 aa15.01□□□□□ -0.01
HMGB3P4-201ENST00000428776 EIF6P56537 245 aaKnown RBP15.01□□□□□ -0.01
HMGB3P4-201ENST00000428776 CUL4AQ13619 759 aa15.01□□□□□ -0.01
HMGB3P4-201ENST00000428776 CFAP100Q494V2 611 aa15.01□□□□□ -0.01
HMGB3P4-201ENST00000428776 NOL8Q76FK4 1167 aaKnown RBP15.01□□□□□ -0.01
HMGB3P4-201ENST00000428776 MTA3Q9BTC8 594 aa15.01□□□□□ -0.01
HMGB3P4-201ENST00000428776 TACC3Q9Y6A5 838 aa15.01□□□□□ -0.01
HMGB3P4-201ENST00000428776 B4E1Z4 1266 aa15□□□□□ -0.01
HMGB3P4-201ENST00000428776 ORC4O43929 436 aa15□□□□□ -0.01
HMGB3P4-201ENST00000428776 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
HMGB3P4-201ENST00000428776 WDHD1O75717 1129 aaPredicted RBP15□□□□□ -0.01
HMGB3P4-201ENST00000428776 ANTXR2P58335 489 aa15□□□□□ -0.01
HMGB3P4-201ENST00000428776 PDE4BQ07343 736 aa15□□□□□ -0.01
HMGB3P4-201ENST00000428776 MTMR14Q8NCE2 650 aa15□□□□□ -0.01
HMGB3P4-201ENST00000428776 ESR2Q92731 530 aa15□□□□□ -0.01
HMGB3P4-201ENST00000428776 INTS4Q96HW7 963 aaKnown RBP15□□□□□ -0.01
HMGB3P4-201ENST00000428776 TMEM87BQ96K49 555 aa15□□□□□ -0.01
HMGB3P4-201ENST00000428776 INCENPQ9NQS7 918 aa15□□□□□ -0.01
HMGB3P4-201ENST00000428776 TOMM22Q9NS69 142 aa15□□□□□ -0.01
HMGB3P4-201ENST00000428776 ZBTB12Q9Y330 459 aaPredicted RBP15□□□□□ -0.01
HMGB3P4-201ENST00000428776 KDM4AO75164 1064 aa14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 CYP2D6P10635 497 aa14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 DLGAP5Q15398 846 aa14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 CYB5R4Q7L1T6 521 aa14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 CHST3Q7LGC8 479 aa14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 SPRYD3Q8NCJ5 442 aa14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 BRF1Q92994 677 aa14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 IDI2Q9BXS1 227 aa14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 ZNF287Q9HBT7 754 aa14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 ZSWIM5Q9P217 1185 aa14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 SAP30BPQ9UHR5 308 aaKnown RBP14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 TPCN1Q9ULQ1 816 aa14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 SIPA1L1O43166 1804 aa14.99□□□□□ -0.01
HMGB3P4-201ENST00000428776 GOLGB1Q14789 3259 aaKnown RBP14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 SPDYE2BA6NHP3 402 aa14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 SPDYE6P0CI01 402 aa14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 YBX3P16989 372 aaKnown RBP eCLIP14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 EVCP57679 992 aa14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 PICALMQ13492 652 aa14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 SART3Q15020 963 aaKnown RBP14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 RRP12Q5JTH9 1297 aaKnown RBP14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 TTC6Q86TZ1 520 aa14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 DPF2Q92785 391 aa14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 PRMT6Q96LA8 375 aaPredicted RBP14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 LARP6Q9BRS8 491 aaKnown RBP14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 LRRC2Q9BYS8 371 aa14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 OSBPL5Q9H0X9 879 aaPredicted RBP14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 CWC22Q9HCG8 908 aaKnown RBP14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 PCDHAC2Q9Y5I4 1007 aa14.98□□□□□ -0.01
HMGB3P4-201ENST00000428776 SMIM22K7EJ46 135 aa14.97□□□□□ -0.01
HMGB3P4-201ENST00000428776 SOCS7O14512 581 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms